RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 CCDC96Q2M329 555 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 C8orf58Q8NAV2 365 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 RAB11FIP4Q86YS3 637 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 LRRC2Q9BYS8 371 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 TACC1O75410 805 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 MYO1BO43795 1136 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 IDEP14735 1019 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 UBE4AQ14139 1066 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 OTUD6BQ8N6M0 293 aa18.78■□□□□ 0.6
SNAPC4-201ENST00000298532 CHMLP26374 656 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 KRT83P78385 493 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 CAVIN4Q5BKX8 364 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 HDXQ7Z353 690 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 UBA5Q9GZZ9 404 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 YEATS2Q9ULM3 1422 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 ATP2C2O75185 946 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 PRPF4BQ13523 1007 aaKnown RBP18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 AKAP4Q5JQC9 854 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 TTC41PQ6P2S7 1318 aa18.77■□□□□ 0.6
SNAPC4-201ENST00000298532 KRT86O43790 486 aa18.77■□□□□ 0.59
SNAPC4-201ENST00000298532 EVCP57679 992 aa18.77■□□□□ 0.59
SNAPC4-201ENST00000298532 TRMT112Q9UI30 125 aaKnown RBP18.77■□□□□ 0.59
SNAPC4-201ENST00000298532 SLC5A1P13866 664 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 NSRP1Q9H0G5 558 aaKnown RBP18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 MAGI3Q5TCQ9 1506 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 VAMP4O75379 141 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 RBM5P52756 815 aaKnown RBP eCLIP18.76■□□□□ 0.593e-7■■■■□ 25.8
SNAPC4-201ENST00000298532 CTNNBL1Q8WYA6 563 aaPredicted RBP18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 MCMDC2Q4G0Z9 681 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 DDX46Q7L014 1031 aaKnown RBP18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 CCDC155Q8N6L0 562 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 ZBTB43O43298 467 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 MARCKSP29966 332 aaPredicted RBP18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 ST5P78524 1137 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 HOOK3Q86VS8 718 aa18.76■□□□□ 0.59
SNAPC4-201ENST00000298532 PHACTR2O75167 634 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 AFMP43652 599 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 ATL3Q6DD88 541 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 MFSD6Q6ZSS7 791 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 ZFYP08048 801 aaPredicted RBP18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 SLF2Q8IX21 1173 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 SNRKQ9NRH2 765 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 ZFYVE9O95405 1425 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 KIF5BP33176 963 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 KARSQ15046 597 aaKnown RBP18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 CCDC121Q6ZUS5 278 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 CDC5LQ99459 802 aaKnown RBP18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 PUF60Q9UHX1 559 aaKnown RBP18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 NLRP1Q9C000 1473 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 ARFGAP2Q8N6H7 521 aa18.75■□□□□ 0.59
SNAPC4-201ENST00000298532 A0A1B0GUL7 405 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 KIAA0753Q2KHM9 967 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 ZNF569Q5MCW4 686 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 LZTFL1Q9NQ48 299 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 POLD1P28340 1107 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 PPP2R3AQ06190 1150 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 KIF5AQ12840 1032 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 KRBA2Q6ZNG9 492 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 LRRC27Q9C0I9 530 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 FSD2A1L4K1 749 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 CETN1Q12798 172 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 CREB3L3Q68CJ9 461 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 MSL1Q68DK7 614 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 RUFY3Q7L099 469 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 UTP14AQ9BVJ6 771 aaKnown RBP18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 LMBRD1Q9NUN5 540 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 EXOC1Q9NV70 894 aa18.74■□□□□ 0.59
SNAPC4-201ENST00000298532 ANKRD18BA2A2Z9 1011 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 NMIQ13287 307 aaPredicted RBP18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 UBE3BQ7Z3V4 1068 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 IP6K1Q92551 441 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 RHOXF2BP0C7M4 288 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 TCERG1LQ5VWI1 586 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 RHOXF2Q9BQY4 288 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 ZNF444Q8N0Y2 327 aaPredicted RBP18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 TESK2Q96S53 571 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 ZCCHC11Q5TAX3 1644 aaKnown RBP18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 KDM5DQ9BY66 1539 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 PSMA7O14818 248 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 ALDH1L1O75891 902 aa18.73■□□□□ 0.59
SNAPC4-201ENST00000298532 ZNF500O60304 480 aaPredicted RBP18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 NBPF7P0C2Y1 421 aaPredicted RBP18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 C6orf163Q5TEZ5 329 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 FAM76AQ8TAV0 307 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 PCDH11XQ9BZA7 1347 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 PCDH11YQ9BZA8 1340 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 MACROD2A1Z1Q3 448 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 ANKS4BQ8N8V4 417 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 DRC1Q96MC2 740 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 PER1O15534 1290 aaPredicted RBP18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 MYL5Q02045 173 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 BRAPQ7Z569 592 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 PPP1R9BQ96SB3 815 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 SELENOOQ9BVL4 669 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 FAM160A1Q05DH4 1040 aa18.72■□□□□ 0.59
SNAPC4-201ENST00000298532 NPHP4O75161 1426 aaPredicted RBP18.71■□□□□ 0.59
SNAPC4-201ENST00000298532 CEP57Q86XR8 500 aa18.71■□□□□ 0.59
SNAPC4-201ENST00000298532 BAG1Q99933 345 aaPredicted RBP18.71■□□□□ 0.59
SNAPC4-201ENST00000298532 ZBTB7BO15156 539 aaPredicted RBP18.71■□□□□ 0.59
SNAPC4-201ENST00000298532 TMTC2Q8N394 836 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms