RNA–Protein interactions for RNA: ENST00000296875.3

GDF9-201, Transcript of growth differentiation factor 9, humanhuman

TSL 5 BASIC

Gene GDF9, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF9-201ENST00000296875 TTF1Q15361 905 aaPredicted RBP17.23■□□□□ 0.35
GDF9-201ENST00000296875 GTF3C6Q969F1 213 aa17.23■□□□□ 0.35
GDF9-201ENST00000296875 RBSNQ9H1K0 784 aa17.23■□□□□ 0.35
GDF9-201ENST00000296875 ZSCAN16Q9H4T2 348 aaPredicted RBP17.23■□□□□ 0.35
GDF9-201ENST00000296875 CNPY2Q9Y2B0 182 aa17.23■□□□□ 0.35
GDF9-201ENST00000296875 ZNF330Q9Y3S2 320 aaPredicted RBP17.23■□□□□ 0.35
GDF9-201ENST00000296875 ANKRD18BA2A2Z9 1011 aa17.23■□□□□ 0.35
GDF9-201ENST00000296875 TOB2Q14106 344 aaPredicted RBP17.23■□□□□ 0.35
GDF9-201ENST00000296875 KRT27Q7Z3Y8 459 aa17.23■□□□□ 0.35
GDF9-201ENST00000296875 ZSCAN30Q86W11 494 aa17.23■□□□□ 0.35
GDF9-201ENST00000296875 EDC3Q96F86 508 aaKnown RBP17.23■□□□□ 0.35
GDF9-201ENST00000296875 CYP19A1P11511 503 aaPredicted RBP17.22■□□□□ 0.35
GDF9-201ENST00000296875 MCM5P33992 734 aa17.22■□□□□ 0.35
GDF9-201ENST00000296875 IL6STP40189 918 aaPredicted RBP17.22■□□□□ 0.35
GDF9-201ENST00000296875 TIMM10P62072 90 aa17.22■□□□□ 0.35
GDF9-201ENST00000296875 ZNF512BQ96KM6 892 aaPredicted RBP17.22■□□□□ 0.35
GDF9-201ENST00000296875 LOC102724428A0A0B4J2F2 783 aa17.21■□□□□ 0.35
GDF9-201ENST00000296875 GOLGA6L4A6NEF3 574 aa17.21■□□□□ 0.35
GDF9-201ENST00000296875 FIBPO43427 364 aa17.21■□□□□ 0.35
GDF9-201ENST00000296875 CYP21A2P08686 494 aa17.21■□□□□ 0.35
GDF9-201ENST00000296875 SIK1P57059 783 aa17.21■□□□□ 0.35
GDF9-201ENST00000296875 LRRC24Q50LG9 513 aa17.21■□□□□ 0.35
GDF9-201ENST00000296875 NECAB1Q8N987 351 aa17.21■□□□□ 0.35
GDF9-201ENST00000296875 SMARCC1Q92922 1105 aaPredicted RBP17.21■□□□□ 0.35
GDF9-201ENST00000296875 PDLIM2Q96JY6 352 aa17.21■□□□□ 0.35
GDF9-201ENST00000296875 LARP6Q9BRS8 491 aaKnown RBP17.21■□□□□ 0.35
GDF9-201ENST00000296875 RRAGDQ9NQL2 400 aaPredicted RBP17.21■□□□□ 0.35
GDF9-201ENST00000296875 CCDC39Q9UFE4 941 aa17.21■□□□□ 0.35
GDF9-201ENST00000296875 ITPK1Q13572 414 aa17.2■□□□□ 0.34
GDF9-201ENST00000296875 Q6ZUG5 572 aa17.2■□□□□ 0.34
GDF9-201ENST00000296875 ANKRD36CQ5JPF3 1778 aa17.2■□□□□ 0.34
GDF9-201ENST00000296875 H3BQV1 296 aa17.2■□□□□ 0.34
GDF9-201ENST00000296875 IMMTQ16891 758 aaKnown RBP17.2■□□□□ 0.34
GDF9-201ENST00000296875 FOXD4L6Q3SYB3 417 aaPredicted RBP17.2■□□□□ 0.34
GDF9-201ENST00000296875 IFFO2Q5TF58 517 aa17.2■□□□□ 0.34
GDF9-201ENST00000296875 ATL3Q6DD88 541 aa17.2■□□□□ 0.34
GDF9-201ENST00000296875 FOXD4L3Q6VB84 417 aaPredicted RBP17.2■□□□□ 0.34
GDF9-201ENST00000296875 FBXL16Q8N461 479 aa17.2■□□□□ 0.34
GDF9-201ENST00000296875 CFAP45Q9UL16 551 aa17.2■□□□□ 0.34
GDF9-201ENST00000296875 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
GDF9-201ENST00000296875 PDE8AO60658 829 aa17.19■□□□□ 0.34
GDF9-201ENST00000296875 CTSWP56202 376 aa17.19■□□□□ 0.34
GDF9-201ENST00000296875 ATP2B3Q16720 1220 aa17.19■□□□□ 0.34
GDF9-201ENST00000296875 METTL24Q5JXM2 366 aa17.19■□□□□ 0.34
GDF9-201ENST00000296875 FAM196AQ6ZSG2 479 aa17.19■□□□□ 0.34
GDF9-201ENST00000296875 NLRP10Q86W26 655 aa17.19■□□□□ 0.34
GDF9-201ENST00000296875 XAGE2Q96GT9 111 aa17.19■□□□□ 0.34
GDF9-201ENST00000296875 GDPD2Q9HCC8 539 aa17.19■□□□□ 0.34
GDF9-201ENST00000296875 NSFL1CQ9UNZ2 370 aaKnown RBP17.19■□□□□ 0.34
GDF9-201ENST00000296875 DHX16O60231 1041 aaKnown RBP17.18■□□□□ 0.34
GDF9-201ENST00000296875 PFKFB2O60825 505 aa17.18■□□□□ 0.34
GDF9-201ENST00000296875 GADD45BO75293 160 aaPredicted RBP17.18■□□□□ 0.34
GDF9-201ENST00000296875 UQCRFS1P1P0C7P4 283 aa17.18■□□□□ 0.34
GDF9-201ENST00000296875 HSPD1P10809 573 aaKnown RBP17.18■□□□□ 0.34
GDF9-201ENST00000296875 FKBP4Q02790 459 aaKnown RBP eCLIP17.18■□□□□ 0.34
GDF9-201ENST00000296875 DNM1Q05193 864 aaKnown RBP17.18■□□□□ 0.34
GDF9-201ENST00000296875 LDHAL6AQ6ZMR3 332 aa17.18■□□□□ 0.34
GDF9-201ENST00000296875 APPBP2Q92624 585 aa17.18■□□□□ 0.34
GDF9-201ENST00000296875 ZNF594Q96JF6 807 aaPredicted RBP17.18■□□□□ 0.34
GDF9-201ENST00000296875 ST3GAL1Q11201 340 aa17.17■□□□□ 0.34
GDF9-201ENST00000296875 NAA16Q6N069 864 aaPredicted RBP17.17■□□□□ 0.34
GDF9-201ENST00000296875 CCDC129Q6ZRS4 1044 aa17.17■□□□□ 0.34
GDF9-201ENST00000296875 ZNF274Q96GC6 653 aaPredicted RBP17.17■□□□□ 0.34
GDF9-201ENST00000296875 FAM89AQ96GI7 184 aa17.17■□□□□ 0.34
GDF9-201ENST00000296875 AGXT2Q9BYV1 514 aa17.17■□□□□ 0.34
GDF9-201ENST00000296875 BCL11BQ9C0K0 894 aaPredicted RBP17.17■□□□□ 0.34
GDF9-201ENST00000296875 CNNM1Q9NRU3 951 aa17.17■□□□□ 0.34
GDF9-201ENST00000296875 MAST3O60307 1309 aa17.17■□□□□ 0.34
GDF9-201ENST00000296875 WDR19Q8NEZ3 1342 aa17.17■□□□□ 0.34
GDF9-201ENST00000296875 RGS22Q8NE09 1264 aa17.17■□□□□ 0.34
GDF9-201ENST00000296875 MROH5Q6ZUA9 1318 aa17.16■□□□□ 0.34
GDF9-201ENST00000296875 IRS4O14654 1257 aaPredicted RBP17.16■□□□□ 0.34
GDF9-201ENST00000296875 ITGA6P23229 1130 aa17.16■□□□□ 0.34
GDF9-201ENST00000296875 ATP6V1AP38606 617 aa17.16■□□□□ 0.34
GDF9-201ENST00000296875 WASHC4Q2M389 1173 aa17.16■□□□□ 0.34
GDF9-201ENST00000296875 INTS5Q6P9B9 1019 aaKnown RBP17.16■□□□□ 0.34
GDF9-201ENST00000296875 BRF1Q92994 677 aa17.16■□□□□ 0.34
GDF9-201ENST00000296875 SEC62Q99442 399 aaKnown RBP17.16■□□□□ 0.34
GDF9-201ENST00000296875 TRMT112Q9UI30 125 aaKnown RBP17.16■□□□□ 0.34
GDF9-201ENST00000296875 CCDC192P0DO97 292 aa17.15■□□□□ 0.34
GDF9-201ENST00000296875 DZIP3Q86Y13 1208 aaKnown RBP17.15■□□□□ 0.34
GDF9-201ENST00000296875 TTLL11Q8NHH1 800 aa17.15■□□□□ 0.34
GDF9-201ENST00000296875 CHAMP1Q96JM3 812 aa17.15■□□□□ 0.34
GDF9-201ENST00000296875 SPATA32Q96LK8 384 aa17.15■□□□□ 0.34
GDF9-201ENST00000296875 DDX19AQ9NUU7 478 aaKnown RBP17.15■□□□□ 0.34
GDF9-201ENST00000296875 TBC1D2BQ9UPU7 963 aa17.15■□□□□ 0.34
GDF9-201ENST00000296875 ZBTB1Q9Y2K1 713 aa17.15■□□□□ 0.34
GDF9-201ENST00000296875 E7EWF7 191 aa17.15■□□□□ 0.34
GDF9-201ENST00000296875 EXOSC10Q01780 885 aaKnown RBP17.15■□□□□ 0.34
GDF9-201ENST00000296875 STK3Q13188 491 aa17.15■□□□□ 0.34
GDF9-201ENST00000296875 PARP10Q53GL7 1025 aa17.15■□□□□ 0.34
GDF9-201ENST00000296875 CDC37L1Q7L3B6 337 aa17.15■□□□□ 0.34
GDF9-201ENST00000296875 SMARCC2Q8TAQ2 1214 aa17.15■□□□□ 0.34
GDF9-201ENST00000296875 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
GDF9-201ENST00000296875 RIPOR2Q9Y4F9 1068 aa17.15■□□□□ 0.34
GDF9-201ENST00000296875 NDUFB9Q9Y6M9 179 aa17.15■□□□□ 0.34
GDF9-201ENST00000296875 MYH3P11055 1940 aa17.14■□□□□ 0.33
GDF9-201ENST00000296875 NOL7Q9UMY1 257 aaKnown RBP17.14■□□□□ 0.33
GDF9-201ENST00000296875 CRKLP46109 303 aaKnown RBP17.13■□□□□ 0.33
GDF9-201ENST00000296875 KCNQ4P56696 695 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms