RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 BRF1Q92994 677 aa16.62■□□□□ 0.25
NXF1-201ENST00000294172 FAM98CQ17RN3 349 aaKnown RBP16.62■□□□□ 0.25
NXF1-201ENST00000294172 PDE8BO95263 885 aa16.61■□□□□ 0.25
NXF1-201ENST00000294172 MCAMP43121 646 aa16.61■□□□□ 0.25
NXF1-201ENST00000294172 DNM1Q05193 864 aaKnown RBP16.61■□□□□ 0.25
NXF1-201ENST00000294172 TTLL5Q6EMB2 1281 aa16.61■□□□□ 0.25
NXF1-201ENST00000294172 BARGINQ6ZT62 677 aa16.61■□□□□ 0.25
NXF1-201ENST00000294172 UTP14AQ9BVJ6 771 aaKnown RBP16.61■□□□□ 0.25
NXF1-201ENST00000294172 NRAPQ86VF7 1730 aa16.61■□□□□ 0.25
NXF1-201ENST00000294172 TCHHQ07283 1943 aa16.61■□□□□ 0.25
NXF1-201ENST00000294172 ZFYP08048 801 aaPredicted RBP16.61■□□□□ 0.25
NXF1-201ENST00000294172 HMGB1P09429 215 aaKnown RBP16.61■□□□□ 0.25
NXF1-201ENST00000294172 DHX32Q7L7V1 743 aaKnown RBP16.61■□□□□ 0.25
NXF1-201ENST00000294172 VGLL2Q8N8G2 317 aa16.61■□□□□ 0.25
NXF1-201ENST00000294172 ANKRD36CQ5JPF3 1778 aa16.6■□□□□ 0.25
NXF1-201ENST00000294172 CAMTA2O94983 1202 aa16.6■□□□□ 0.25
NXF1-201ENST00000294172 PDCP20941 246 aa16.6■□□□□ 0.25
NXF1-201ENST00000294172 FERMT3Q86UX7 667 aa16.6■□□□□ 0.25
NXF1-201ENST00000294172 NIP7Q9Y221 180 aaKnown RBP eCLIP16.6■□□□□ 0.25
NXF1-201ENST00000294172 E7EWF7 191 aa16.59■□□□□ 0.25
NXF1-201ENST00000294172 CDC37L1Q7L3B6 337 aa16.59■□□□□ 0.25
NXF1-201ENST00000294172 TMEM87AQ8NBN3 555 aa16.59■□□□□ 0.25
NXF1-201ENST00000294172 GTF3C6Q969F1 213 aa16.59■□□□□ 0.25
NXF1-201ENST00000294172 PUS7LQ9H0K6 701 aaKnown RBP16.59■□□□□ 0.25
NXF1-201ENST00000294172 RBSNQ9H1K0 784 aa16.59■□□□□ 0.25
NXF1-201ENST00000294172 JAK2O60674 1132 aa16.59■□□□□ 0.25
NXF1-201ENST00000294172 LRSAM1Q6UWE0 723 aa16.59■□□□□ 0.25
NXF1-201ENST00000294172 SYAP1Q96A49 352 aaPredicted RBP16.59■□□□□ 0.25
NXF1-201ENST00000294172 C8orf37Q96NL8 207 aa16.59■□□□□ 0.25
NXF1-201ENST00000294172 SPEF2Q9C093 1822 aa16.59■□□□□ 0.25
NXF1-201ENST00000294172 CHST3Q7LGC8 479 aa16.58■□□□□ 0.25
NXF1-201ENST00000294172 APPBP2Q92624 585 aa16.58■□□□□ 0.25
NXF1-201ENST00000294172 ANP32BQ92688 251 aaKnown RBP16.58■□□□□ 0.25
NXF1-201ENST00000294172 MPHOSPH8Q99549 860 aa16.58■□□□□ 0.25
NXF1-201ENST00000294172 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.58■□□□□ 0.254e-7■■■■□ 25.1
NXF1-201ENST00000294172 RRAGDQ9NQL2 400 aaPredicted RBP16.58■□□□□ 0.25
NXF1-201ENST00000294172 SEC31BQ9NQW1 1179 aa16.58■□□□□ 0.25
NXF1-201ENST00000294172 SLIT2O94813 1529 aa16.58■□□□□ 0.24
NXF1-201ENST00000294172 PHKA1P46020 1223 aa16.58■□□□□ 0.24
NXF1-201ENST00000294172 HAND2P61296 217 aa16.58■□□□□ 0.24
NXF1-201ENST00000294172 PUM3Q15397 648 aaKnown RBP16.58■□□□□ 0.24
NXF1-201ENST00000294172 CCDC102BQ68D86 513 aa16.58■□□□□ 0.24
NXF1-201ENST00000294172 NGLY1Q96IV0 654 aa16.58■□□□□ 0.24
NXF1-201ENST00000294172 NAP1L2Q9ULW6 460 aaPredicted RBP16.58■□□□□ 0.24
NXF1-201ENST00000294172 MYH3P11055 1940 aa16.58■□□□□ 0.24
NXF1-201ENST00000294172 KCNQ4P56696 695 aa16.57■□□□□ 0.24
NXF1-201ENST00000294172 APOBRQ0VD83 1088 aa16.57■□□□□ 0.24
NXF1-201ENST00000294172 SMARCC1Q92922 1105 aaPredicted RBP16.57■□□□□ 0.24
NXF1-201ENST00000294172 DDX11Q96FC9 970 aa16.57■□□□□ 0.24
NXF1-201ENST00000294172 AK7Q96M32 723 aa16.57■□□□□ 0.24
NXF1-201ENST00000294172 MROH5Q6ZUA9 1318 aa16.57■□□□□ 0.24
NXF1-201ENST00000294172 ABCC12Q96J65 1359 aa16.57■□□□□ 0.24
NXF1-201ENST00000294172 SNAP23O00161 211 aa16.57■□□□□ 0.24
NXF1-201ENST00000294172 IDH1O75874 414 aaKnown RBP16.57■□□□□ 0.24
NXF1-201ENST00000294172 SCRN1Q12765 414 aa16.57■□□□□ 0.24
NXF1-201ENST00000294172 PARP10Q53GL7 1025 aa16.57■□□□□ 0.24
NXF1-201ENST00000294172 SLC9C2Q5TAH2 1124 aa16.57■□□□□ 0.24
NXF1-201ENST00000294172 CTNNA3Q9UI47 895 aa16.57■□□□□ 0.24
NXF1-201ENST00000294172 FOXP2O15409 715 aa16.56■□□□□ 0.24
NXF1-201ENST00000294172 GPAA1O43292 621 aa16.56■□□□□ 0.24
NXF1-201ENST00000294172 FGAP02671 866 aa16.56■□□□□ 0.24
NXF1-201ENST00000294172 UBE2HP62256 183 aa16.56■□□□□ 0.24
NXF1-201ENST00000294172 EXOSC10Q01780 885 aaKnown RBP16.56■□□□□ 0.24
NXF1-201ENST00000294172 FAM173BQ6P4H8 233 aa16.56■□□□□ 0.24
NXF1-201ENST00000294172 LPIN2Q92539 896 aa16.56■□□□□ 0.24
NXF1-201ENST00000294172 ANO8Q9HCE9 1232 aaPredicted RBP16.56■□□□□ 0.24
NXF1-201ENST00000294172 PIH1D3Q9NQM4 214 aaKnown RBP16.56■□□□□ 0.24
NXF1-201ENST00000294172 PDIA4P13667 645 aaKnown RBP16.56■□□□□ 0.24
NXF1-201ENST00000294172 IMMTQ16891 758 aaKnown RBP16.56■□□□□ 0.24
NXF1-201ENST00000294172 CSPP1Q1MSJ5 1256 aa16.56■□□□□ 0.24
NXF1-201ENST00000294172 ZNF512BQ96KM6 892 aaPredicted RBP16.56■□□□□ 0.24
NXF1-201ENST00000294172 UBAP1LF5GYI3 381 aa16.55■□□□□ 0.24
NXF1-201ENST00000294172 TTF1Q15361 905 aaPredicted RBP16.55■□□□□ 0.24
NXF1-201ENST00000294172 CCDC152Q4G0S7 254 aa16.55■□□□□ 0.24
NXF1-201ENST00000294172 ZSCAN25Q6NSZ9 544 aa16.55■□□□□ 0.24
NXF1-201ENST00000294172 TRIM44Q96DX7 344 aaPredicted RBP16.55■□□□□ 0.24
NXF1-201ENST00000294172 CCT2P78371 535 aaKnown RBP16.54■□□□□ 0.24
NXF1-201ENST00000294172 FAM184AQ8NB25 1140 aa16.54■□□□□ 0.24
NXF1-201ENST00000294172 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.54■□□□□ 0.24
NXF1-201ENST00000294172 MYH14Q7Z406 1995 aaKnown RBP16.54■□□□□ 0.24
NXF1-201ENST00000294172 PFKFB2O60825 505 aa16.54■□□□□ 0.24
NXF1-201ENST00000294172 NTSR2O95665 410 aa16.54■□□□□ 0.24
NXF1-201ENST00000294172 UQCRFS1P1P0C7P4 283 aa16.54■□□□□ 0.24
NXF1-201ENST00000294172 SLC5A1P13866 664 aa16.54■□□□□ 0.24
NXF1-201ENST00000294172 FGFR2P21802 821 aa16.54■□□□□ 0.24
NXF1-201ENST00000294172 ADD2P35612 726 aa16.54■□□□□ 0.24
NXF1-201ENST00000294172 PHF14O94880 888 aa16.53■□□□□ 0.24
NXF1-201ENST00000294172 KRT85P78386 507 aa16.53■□□□□ 0.24
NXF1-201ENST00000294172 LINC00116Q8NCU8 138 aa16.53■□□□□ 0.24
NXF1-201ENST00000294172 RNF214Q8ND24 703 aa16.53■□□□□ 0.24
NXF1-201ENST00000294172 ZNF652Q9Y2D9 606 aa16.53■□□□□ 0.24
NXF1-201ENST00000294172 H3BQV1 296 aa16.53■□□□□ 0.24
NXF1-201ENST00000294172 ARID4AP29374 1257 aaPredicted RBP16.53■□□□□ 0.24
NXF1-201ENST00000294172 IGHMBP2P38935 993 aaKnown RBP16.53■□□□□ 0.24
NXF1-201ENST00000294172 CCDC173Q0VFZ6 552 aa16.53■□□□□ 0.24
NXF1-201ENST00000294172 IFFO2Q5TF58 517 aa16.53■□□□□ 0.24
NXF1-201ENST00000294172 PPFIA3O75145 1194 aa16.52■□□□□ 0.24
NXF1-201ENST00000294172 APPP05067 770 aa16.52■□□□□ 0.24
NXF1-201ENST00000294172 SMIM5Q71RC9 77 aa16.52■□□□□ 0.24
NXF1-201ENST00000294172 TSPY26PQ9H489 355 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms