RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 PSME4Q14997 1843 aa33.4■■■□□ 2.94
SSU72-201ENST00000291386 G3V3G9 751 aa33.4■■■□□ 2.94
SSU72-201ENST00000291386 DCAF8Q5TAQ9 597 aa33.4■■■□□ 2.94
SSU72-201ENST00000291386 FGFR2P21802 821 aa33.39■■■□□ 2.94
SSU72-201ENST00000291386 CIAPIN1Q6FI81 312 aa33.39■■■□□ 2.94
SSU72-201ENST00000291386 CEP126Q9P2H0 1117 aa33.39■■■□□ 2.94
SSU72-201ENST00000291386 SCN9AQ15858 1988 aa33.39■■■□□ 2.94
SSU72-201ENST00000291386 TNIP1Q15025 636 aa33.38■■■□□ 2.93
SSU72-201ENST00000291386 PUM3Q15397 648 aaKnown RBP33.38■■■□□ 2.93
SSU72-201ENST00000291386 NOP58Q9Y2X3 529 aaKnown RBP33.38■■■□□ 2.93
SSU72-201ENST00000291386 SUPT16HQ9Y5B9 1047 aaKnown RBP33.37■■■□□ 2.93
SSU72-201ENST00000291386 SCN4AP35499 1836 aa33.37■■■□□ 2.93
SSU72-201ENST00000291386 G3BP1Q13283 466 aaKnown RBP eCLIP33.36■■■□□ 2.93
SSU72-201ENST00000291386 NMRK2Q9NPI5 230 aa33.36■■■□□ 2.93
SSU72-201ENST00000291386 POTECB2RU33 542 aa33.35■■■□□ 2.93
SSU72-201ENST00000291386 RAD17O75943 681 aa33.35■■■□□ 2.93
SSU72-201ENST00000291386 ZNF804AQ7Z570 1209 aa33.34■■■□□ 2.93
SSU72-201ENST00000291386 SIRT2Q8IXJ6 389 aa33.34■■■□□ 2.93
SSU72-201ENST00000291386 LPIN2Q92539 896 aa33.34■■■□□ 2.93
SSU72-201ENST00000291386 RRAGCQ9HB90 399 aa33.34■■■□□ 2.93
SSU72-201ENST00000291386 CD209Q9NNX6 404 aa33.34■■■□□ 2.93
SSU72-201ENST00000291386 KCNQ5Q9NR82 932 aa33.34■■■□□ 2.93
SSU72-201ENST00000291386 GJA3Q9Y6H8 435 aa33.34■■■□□ 2.93
SSU72-201ENST00000291386 IL1R1P14778 569 aa33.33■■■□□ 2.93
SSU72-201ENST00000291386 CRBNQ96SW2 442 aa33.33■■■□□ 2.93
SSU72-201ENST00000291386 HMMRO75330 724 aa33.32■■■□□ 2.92
SSU72-201ENST00000291386 SURF6O75683 361 aaKnown RBP33.32■■■□□ 2.92
SSU72-201ENST00000291386 IFIT1P09914 478 aaKnown RBP33.32■■■□□ 2.92
SSU72-201ENST00000291386 VEGFAP15692 232 aaPredicted RBP33.32■■■□□ 2.92
SSU72-201ENST00000291386 FAM84BQ96KN1 310 aaPredicted RBP33.32■■■□□ 2.92
SSU72-201ENST00000291386 ZNF609O15014 1411 aa33.31■■■□□ 2.92
SSU72-201ENST00000291386 ZNF646O15015 1829 aaPredicted RBP33.31■■■□□ 2.92
SSU72-201ENST00000291386 PSMD14O00487 310 aa33.31■■■□□ 2.92
SSU72-201ENST00000291386 KIF3CO14782 793 aa33.31■■■□□ 2.92
SSU72-201ENST00000291386 VIL1P09327 827 aaKnown RBP33.31■■■□□ 2.92
SSU72-201ENST00000291386 IQCA1LA6NCM1 817 aa33.3■■■□□ 2.92
SSU72-201ENST00000291386 SLC5A1P13866 664 aa33.3■■■□□ 2.92
SSU72-201ENST00000291386 TFCP2Q12800 502 aa33.3■■■□□ 2.92
SSU72-201ENST00000291386 ATP2B3Q16720 1220 aa33.3■■■□□ 2.92
SSU72-201ENST00000291386 FBXO33Q7Z6M2 555 aa33.3■■■□□ 2.92
SSU72-201ENST00000291386 ARAP2Q8WZ64 1704 aa33.29■■■□□ 2.92
SSU72-201ENST00000291386 USP17L3A6NCW0 530 aa33.29■■■□□ 2.92
SSU72-201ENST00000291386 USP17L4A6NCW7 530 aa33.29■■■□□ 2.92
SSU72-201ENST00000291386 SASH1O94885 1247 aa33.29■■■□□ 2.92
SSU72-201ENST00000291386 HIBADHP31937 336 aaKnown RBP33.29■■■□□ 2.92
SSU72-201ENST00000291386 USP17L1Q7RTZ2 530 aa33.29■■■□□ 2.92
SSU72-201ENST00000291386 AKAP2Q9Y2D5 859 aa33.29■■■□□ 2.92
SSU72-201ENST00000291386 GYG1P46976 350 aa33.28■■■□□ 2.92
SSU72-201ENST00000291386 SCNN1DP51172 638 aa33.28■■■□□ 2.92
SSU72-201ENST00000291386 AAMPQ13685 434 aa33.28■■■□□ 2.92
SSU72-201ENST00000291386 CAVIN4Q5BKX8 364 aa33.28■■■□□ 2.92
SSU72-201ENST00000291386 STRIP1Q5VSL9 837 aa33.28■■■□□ 2.92
SSU72-201ENST00000291386 RPS12P25398 132 aaKnown RBP33.27■■■□□ 2.92
SSU72-201ENST00000291386 TDRD7Q8NHU6 1098 aaKnown RBP33.27■■■□□ 2.92
SSU72-201ENST00000291386 DPF2Q92785 391 aa33.27■■■□□ 2.92
SSU72-201ENST00000291386 HACL1Q9UJ83 578 aa33.27■■■□□ 2.92
SSU72-201ENST00000291386 GPR108Q9NPR9 543 aa33.26■■■□□ 2.91
SSU72-201ENST00000291386 GMPSP49915 693 aaPredicted RBP33.25■■■□□ 2.91
SSU72-201ENST00000291386 HSP90AB4PQ58FF6 505 aa33.25■■■□□ 2.91
SSU72-201ENST00000291386 GPRC5DQ9NZD1 345 aa33.25■■■□□ 2.91
SSU72-201ENST00000291386 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP33.25■■■□□ 2.91
SSU72-201ENST00000291386 LMOD1P29536 600 aaPredicted RBP33.24■■■□□ 2.91
SSU72-201ENST00000291386 OS9Q13438 667 aaPredicted RBP33.24■■■□□ 2.91
SSU72-201ENST00000291386 DACT2Q5SW24 774 aa33.24■■■□□ 2.91
SSU72-201ENST00000291386 RSBN1LQ6PCB5 846 aaPredicted RBP33.24■■■□□ 2.91
SSU72-201ENST00000291386 AGBL3Q8NEM8 1001 aa33.24■■■□□ 2.91
SSU72-201ENST00000291386 ZBTB22O15209 634 aa33.23■■■□□ 2.91
SSU72-201ENST00000291386 TTLL5Q6EMB2 1281 aa33.23■■■□□ 2.91
SSU72-201ENST00000291386 ERC1Q8IUD2 1116 aa33.23■■■□□ 2.91
SSU72-201ENST00000291386 TAF1DQ9H5J8 278 aaPredicted RBP33.23■■■□□ 2.91
SSU72-201ENST00000291386 ZBTB12Q9Y330 459 aaPredicted RBP33.23■■■□□ 2.91
SSU72-201ENST00000291386 A0A1B0GUL7 405 aa33.22■■■□□ 2.91
SSU72-201ENST00000291386 BCAMP50895 628 aa33.22■■■□□ 2.91
SSU72-201ENST00000291386 VPS37DQ86XT2 251 aa33.22■■■□□ 2.91
SSU72-201ENST00000291386 EXOC6BQ9Y2D4 811 aa33.22■■■□□ 2.91
SSU72-201ENST00000291386 FAM205AQ6ZU69 1335 aa33.22■■■□□ 2.91
SSU72-201ENST00000291386 MYO3BQ8WXR4 1341 aa33.22■■■□□ 2.91
SSU72-201ENST00000291386 TIMM10P62072 90 aa33.21■■■□□ 2.91
SSU72-201ENST00000291386 GTF2IP78347 998 aa33.21■■■□□ 2.91
SSU72-201ENST00000291386 GMLQ99445 158 aa33.21■■■□□ 2.91
SSU72-201ENST00000291386 PCDHB15Q9Y5E8 787 aa33.21■■■□□ 2.91
SSU72-201ENST00000291386 EPHX2P34913 555 aa33.2■■■□□ 2.91
SSU72-201ENST00000291386 EPS15P42566 896 aa33.2■■■□□ 2.91
SSU72-201ENST00000291386 FKBP1AP62942 108 aaKnown RBP33.2■■■□□ 2.91
SSU72-201ENST00000291386 CNOT7Q9UIV1 285 aaKnown RBP33.19■■■□□ 2.9
SSU72-201ENST00000291386 TNNI3KQ59H18 835 aa33.18■■■□□ 2.9
SSU72-201ENST00000291386 PNMA8AQ86V59 439 aaPredicted RBP33.18■■■□□ 2.9
SSU72-201ENST00000291386 XAGE2Q96GT9 111 aa33.18■■■□□ 2.9
SSU72-201ENST00000291386 FPGT-TNNI3KV9GXZ4 949 aa33.18■■■□□ 2.9
SSU72-201ENST00000291386 RAB11FIP3O75154 756 aa33.17■■■□□ 2.9
SSU72-201ENST00000291386 TOMM70O94826 608 aa33.17■■■□□ 2.9
SSU72-201ENST00000291386 ADORA1P30542 326 aa33.17■■■□□ 2.9
SSU72-201ENST00000291386 C16orf71Q8IYS4 520 aaPredicted RBP33.17■■■□□ 2.9
SSU72-201ENST00000291386 ADARB2Q9NS39 739 aaKnown RBP33.17■■■□□ 2.9
SSU72-201ENST00000291386 MMP14P50281 582 aa33.16■■■□□ 2.9
SSU72-201ENST00000291386 FBXW7Q969H0 707 aa33.16■■■□□ 2.9
SSU72-201ENST00000291386 ADAMTSL1Q8N6G6 1762 aa33.16■■■□□ 2.9
SSU72-201ENST00000291386 MYH13Q9UKX3 1938 aa33.16■■■□□ 2.9
SSU72-201ENST00000291386 CCDC102BQ68D86 513 aa33.15■■■□□ 2.9
SSU72-201ENST00000291386 USP50Q70EL3 339 aaPredicted RBP33.15■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms