RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 WDR43Q15061 677 aaKnown RBP eCLIP13.91□□□□□ -0.18
NSMCE2-201ENST00000287437 NBPF9Q3BBW0 867 aa13.91□□□□□ -0.18
NSMCE2-201ENST00000287437 USP17L1Q7RTZ2 530 aa13.91□□□□□ -0.18
NSMCE2-201ENST00000287437 ANKRD18AQ8IVF6 992 aa13.91□□□□□ -0.18
NSMCE2-201ENST00000287437 MYBBP1AQ9BQG0 1328 aaKnown RBP13.9□□□□□ -0.18
NSMCE2-201ENST00000287437 PSME4Q14997 1843 aa13.9□□□□□ -0.18
NSMCE2-201ENST00000287437 ELL2O00472 640 aaPredicted RBP13.9□□□□□ -0.18
NSMCE2-201ENST00000287437 ATP2B4P23634 1241 aa13.9□□□□□ -0.18
NSMCE2-201ENST00000287437 MKRN3Q13064 507 aaKnown RBP13.9□□□□□ -0.18
NSMCE2-201ENST00000287437 TTLL12Q14166 644 aaPredicted RBP13.9□□□□□ -0.18
NSMCE2-201ENST00000287437 PODNQ7Z5L7 613 aa13.9□□□□□ -0.18
NSMCE2-201ENST00000287437 CCDC191Q8NCU4 936 aa13.9□□□□□ -0.18
NSMCE2-201ENST00000287437 MXD3Q9BW11 206 aa13.9□□□□□ -0.18
NSMCE2-201ENST00000287437 CWC25Q9NXE8 425 aaPredicted RBP13.9□□□□□ -0.18
NSMCE2-201ENST00000287437 PKN2Q16513 984 aaKnown RBP13.89□□□□□ -0.19
NSMCE2-201ENST00000287437 ADAMTS8Q9UP79 889 aa13.89□□□□□ -0.19
NSMCE2-201ENST00000287437 MED23Q9ULK4 1368 aa13.88□□□□□ -0.19
NSMCE2-201ENST00000287437 ZNF853P0CG23 659 aa13.88□□□□□ -0.19
NSMCE2-201ENST00000287437 ATXN8OSP0DMR3 200 aa13.88□□□□□ -0.19
NSMCE2-201ENST00000287437 FBXW7Q969H0 707 aa13.88□□□□□ -0.19
NSMCE2-201ENST00000287437 GPR25O00155 361 aa13.87□□□□□ -0.19
NSMCE2-201ENST00000287437 WNT10BO00744 389 aa13.87□□□□□ -0.19
NSMCE2-201ENST00000287437 SASH1O94885 1247 aa13.87□□□□□ -0.19
NSMCE2-201ENST00000287437 TM4SF4P48230 202 aa13.87□□□□□ -0.19
NSMCE2-201ENST00000287437 CTSWP56202 376 aa13.87□□□□□ -0.19
NSMCE2-201ENST00000287437 DACT2Q5SW24 774 aa13.87□□□□□ -0.19
NSMCE2-201ENST00000287437 OGFOD1Q8N543 542 aa13.87□□□□□ -0.19
NSMCE2-201ENST00000287437 CDC5LQ99459 802 aaKnown RBP13.87□□□□□ -0.19
NSMCE2-201ENST00000287437 METTL22Q9BUU2 404 aaPredicted RBP13.87□□□□□ -0.19
NSMCE2-201ENST00000287437 MINPP1Q9UNW1 487 aa13.87□□□□□ -0.19
NSMCE2-201ENST00000287437 NF2P35240 595 aa13.86□□□□□ -0.19
NSMCE2-201ENST00000287437 PRKG1Q13976 671 aa13.86□□□□□ -0.19
NSMCE2-201ENST00000287437 R3HDMLQ9H3Y0 253 aa13.86□□□□□ -0.19
NSMCE2-201ENST00000287437 GREM2Q9H772 168 aa13.86□□□□□ -0.19
NSMCE2-201ENST00000287437 MAP3K2Q9Y2U5 619 aa13.86□□□□□ -0.19
NSMCE2-201ENST00000287437 DDX58O95786 925 aaKnown RBP13.85□□□□□ -0.19
NSMCE2-201ENST00000287437 CCT4P50991 539 aaKnown RBP13.85□□□□□ -0.19
NSMCE2-201ENST00000287437 PTPN12Q05209 780 aaKnown RBP13.85□□□□□ -0.19
NSMCE2-201ENST00000287437 FBXO46Q6PJ61 603 aaPredicted RBP13.85□□□□□ -0.19
NSMCE2-201ENST00000287437 TXNRD3Q86VQ6 643 aa13.85□□□□□ -0.19
NSMCE2-201ENST00000287437 C8orf58Q8NAV2 365 aa13.85□□□□□ -0.19
NSMCE2-201ENST00000287437 TTLL11Q8NHH1 800 aa13.85□□□□□ -0.19
NSMCE2-201ENST00000287437 BSDC1Q9NW68 430 aaPredicted RBP13.85□□□□□ -0.19
NSMCE2-201ENST00000287437 IFT57Q9NWB7 429 aa13.85□□□□□ -0.19
NSMCE2-201ENST00000287437 MYO3BQ8WXR4 1341 aa13.85□□□□□ -0.19
NSMCE2-201ENST00000287437 ZNF646O15015 1829 aaPredicted RBP13.85□□□□□ -0.19
NSMCE2-201ENST00000287437 FKTNO75072 461 aa13.84□□□□□ -0.19
NSMCE2-201ENST00000287437 IGKV5-2P06315 115 aa13.84□□□□□ -0.19
NSMCE2-201ENST00000287437 GNAI1P63096 354 aa13.84□□□□□ -0.19
NSMCE2-201ENST00000287437 SREBF2Q12772 1141 aa13.84□□□□□ -0.19
NSMCE2-201ENST00000287437 NOM1Q5C9Z4 860 aaKnown RBP13.84□□□□□ -0.19
NSMCE2-201ENST00000287437 STRIP1Q5VSL9 837 aa13.84□□□□□ -0.19
NSMCE2-201ENST00000287437 COA1Q9GZY4 146 aa13.84□□□□□ -0.19
NSMCE2-201ENST00000287437 FZD1Q9UP38 647 aa13.84□□□□□ -0.19
NSMCE2-201ENST00000287437 SPEF2Q9C093 1822 aa13.83□□□□□ -0.2
NSMCE2-201ENST00000287437 APAF1O14727 1248 aa13.83□□□□□ -0.2
NSMCE2-201ENST00000287437 KLRK1P26718 216 aa13.83□□□□□ -0.2
NSMCE2-201ENST00000287437 DDX10Q13206 875 aaKnown RBP13.83□□□□□ -0.2
NSMCE2-201ENST00000287437 ARMC9Q7Z3E5 817 aa13.83□□□□□ -0.2
NSMCE2-201ENST00000287437 KIAA0825Q8IV33 1275 aa13.83□□□□□ -0.2
NSMCE2-201ENST00000287437 HTTP42858 3142 aa13.82□□□□□ -0.2
NSMCE2-201ENST00000287437 PI4KAP2A4QPH2 592 aa13.82□□□□□ -0.2
NSMCE2-201ENST00000287437 CWF19L2Q2TBE0 894 aaKnown RBP13.82□□□□□ -0.2
NSMCE2-201ENST00000287437 CCDC30Q5VVM6 783 aa13.82□□□□□ -0.2
NSMCE2-201ENST00000287437 SPRYD7Q5W111 196 aa13.82□□□□□ -0.2
NSMCE2-201ENST00000287437 TTLL5Q6EMB2 1281 aa13.82□□□□□ -0.2
NSMCE2-201ENST00000287437 KSR2Q6VAB6 950 aa13.82□□□□□ -0.2
NSMCE2-201ENST00000287437 APOBEC3FQ8IUX4 373 aaKnown RBP13.82□□□□□ -0.2
NSMCE2-201ENST00000287437 TSPYL6Q8N831 410 aa13.82□□□□□ -0.2
NSMCE2-201ENST00000287437 PI4KAP1Q8N8J0 262 aa13.82□□□□□ -0.2
NSMCE2-201ENST00000287437 CFHR5Q9BXR6 569 aa13.82□□□□□ -0.2
NSMCE2-201ENST00000287437 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.82□□□□□ -0.2
NSMCE2-201ENST00000287437 ANGEL1Q9UNK9 670 aaKnown RBP13.82□□□□□ -0.2
NSMCE2-201ENST00000287437 CALD1Q05682 793 aaKnown RBP13.81□□□□□ -0.2
NSMCE2-201ENST00000287437 LDLRAD1Q5T700 205 aa13.81□□□□□ -0.2
NSMCE2-201ENST00000287437 ZBED3Q96IU2 234 aaPredicted RBP13.81□□□□□ -0.2
NSMCE2-201ENST00000287437 LEMD3Q9Y2U8 911 aa13.81□□□□□ -0.2
NSMCE2-201ENST00000287437 MKI67P46013 3256 aaKnown RBP13.81□□□□□ -0.2
NSMCE2-201ENST00000287437 ZNF804BA4D1E1 1349 aa13.81□□□□□ -0.2
NSMCE2-201ENST00000287437 IGHMBP2P38935 993 aaKnown RBP13.8□□□□□ -0.2
NSMCE2-201ENST00000287437 GTF2IP78347 998 aa13.8□□□□□ -0.2
NSMCE2-201ENST00000287437 NEXNQ0ZGT2 675 aa13.8□□□□□ -0.2
NSMCE2-201ENST00000287437 UBE3BQ7Z3V4 1068 aa13.8□□□□□ -0.2
NSMCE2-201ENST00000287437 NEURL1BA8MQ27 555 aa13.79□□□□□ -0.2
NSMCE2-201ENST00000287437 ALDH1A1P00352 501 aa13.79□□□□□ -0.2
NSMCE2-201ENST00000287437 ITGA6P23229 1130 aa13.79□□□□□ -0.2
NSMCE2-201ENST00000287437 MMP14P50281 582 aa13.79□□□□□ -0.2
NSMCE2-201ENST00000287437 IFNL1Q8IU54 200 aa13.79□□□□□ -0.2
NSMCE2-201ENST00000287437 CLMNQ96JQ2 1002 aa13.79□□□□□ -0.2
NSMCE2-201ENST00000287437 DEFB129Q9H1M3 183 aa13.79□□□□□ -0.2
NSMCE2-201ENST00000287437 TRIM17Q9Y577 477 aa13.79□□□□□ -0.2
NSMCE2-201ENST00000287437 SSC5DA1L4H1 1573 aa13.79□□□□□ -0.2
NSMCE2-201ENST00000287437 MYH3P11055 1940 aa13.78□□□□□ -0.2
NSMCE2-201ENST00000287437 MANSC4A6NHS7 340 aaPredicted RBP13.78□□□□□ -0.2
NSMCE2-201ENST00000287437 H7C1W4 665 aa13.78□□□□□ -0.2
NSMCE2-201ENST00000287437 IGF2BP3O00425 579 aaKnown RBP eCLIP13.78□□□□□ -0.2
NSMCE2-201ENST00000287437 OTOP1Q7RTM1 612 aa13.78□□□□□ -0.2
NSMCE2-201ENST00000287437 SLC10A4Q96EP9 437 aa13.78□□□□□ -0.2
NSMCE2-201ENST00000287437 CHMP4AQ9BY43 222 aa13.78□□□□□ -0.2
NSMCE2-201ENST00000287437 ANKRD2Q9GZV1 360 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms