RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 KLHDC4Q8TBB5 520 aa12.36□□□□□ -0.43
ERCC3-201ENST00000285398 FAM53CQ9NYF3 392 aa12.36□□□□□ -0.43
ERCC3-201ENST00000285398 LRMPQ12912 555 aa12.36□□□□□ -0.43
ERCC3-201ENST00000285398 NAA30Q147X3 362 aaPredicted RBP12.36□□□□□ -0.43
ERCC3-201ENST00000285398 PPP1R42Q7Z4L9 355 aa12.36□□□□□ -0.43
ERCC3-201ENST00000285398 TRIM5Q9C035 493 aa12.36□□□□□ -0.43
ERCC3-201ENST00000285398 SRGAP3O43295 1099 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 IL6STP40189 918 aaPredicted RBP12.35□□□□□ -0.43
ERCC3-201ENST00000285398 DNM1Q05193 864 aaKnown RBP12.35□□□□□ -0.43
ERCC3-201ENST00000285398 TYRO3Q06418 890 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 SLFNL1Q499Z3 407 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 KMT5BQ4FZB7 885 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 FAM89AQ96GI7 184 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 NUP62CLQ9H1M0 184 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 BICC1Q9H694 974 aaKnown RBP12.35□□□□□ -0.43
ERCC3-201ENST00000285398 TJP1Q07157 1748 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 CCDC171Q6TFL3 1326 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 APBA3O96018 575 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 BICDL1Q6ZP65 573 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 LUZP1Q86V48 1076 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 PROM2Q8N271 834 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 SRP68Q9UHB9 627 aaKnown RBP12.35□□□□□ -0.43
ERCC3-201ENST00000285398 PA2G4Q9UQ80 394 aaKnown RBP12.35□□□□□ -0.43
ERCC3-201ENST00000285398 MRVI1Q9Y6F6 885 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 SBF2Q86WG5 1849 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 MAP3K15Q6ZN16 1313 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 TULP2O00295 520 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 ALDH1L1O75891 902 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 ZNF75DP51815 510 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 RUFY3Q7L099 469 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 PLA2G4DQ86XP0 818 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 SNX14Q9Y5W7 946 aa12.35□□□□□ -0.43
ERCC3-201ENST00000285398 NHSQ6T4R5 1651 aa12.34□□□□□ -0.43
ERCC3-201ENST00000285398 AK2P54819 239 aa12.34□□□□□ -0.43
ERCC3-201ENST00000285398 ATP8B2P98198 1209 aa12.34□□□□□ -0.43
ERCC3-201ENST00000285398 RNF20Q5VTR2 975 aa12.34□□□□□ -0.43
ERCC3-201ENST00000285398 ZNF592Q92610 1267 aa12.34□□□□□ -0.43
ERCC3-201ENST00000285398 ERO1AQ96HE7 468 aa12.34□□□□□ -0.43
ERCC3-201ENST00000285398 PXDNLA1KZ92 1463 aa12.34□□□□□ -0.43
ERCC3-201ENST00000285398 NEMFO60524 1076 aa12.34□□□□□ -0.43
ERCC3-201ENST00000285398 TCIRG1Q13488 830 aa12.34□□□□□ -0.43
ERCC3-201ENST00000285398 ERICH4A6NGS2 130 aa12.33□□□□□ -0.44
ERCC3-201ENST00000285398 GIGYF2Q6Y7W6 1299 aaKnown RBP12.33□□□□□ -0.44
ERCC3-201ENST00000285398 CBX8Q9HC52 389 aa12.33□□□□□ -0.44
ERCC3-201ENST00000285398 NRBP1Q9UHY1 535 aa12.33□□□□□ -0.44
ERCC3-201ENST00000285398 SGSM2O43147 1006 aa12.33□□□□□ -0.44
ERCC3-201ENST00000285398 PTPN14Q15678 1187 aa12.33□□□□□ -0.44
ERCC3-201ENST00000285398 SIL1Q9H173 461 aa12.33□□□□□ -0.44
ERCC3-201ENST00000285398 TNMDQ9H2S6 317 aa12.33□□□□□ -0.44
ERCC3-201ENST00000285398 CWC25Q9NXE8 425 aaPredicted RBP12.33□□□□□ -0.44
ERCC3-201ENST00000285398 CLIP2Q9UDT6 1046 aa12.33□□□□□ -0.44
ERCC3-201ENST00000285398 ZNF215Q9UL58 517 aaPredicted RBP12.33□□□□□ -0.44
ERCC3-201ENST00000285398 MTMR6Q9Y217 621 aa12.33□□□□□ -0.44
ERCC3-201ENST00000285398 CHMP3Q9Y3E7 222 aa12.33□□□□□ -0.44
ERCC3-201ENST00000285398 UBN2Q6ZU65 1347 aa12.33□□□□□ -0.44
ERCC3-201ENST00000285398 KRT85P78386 507 aa12.32□□□□□ -0.44
ERCC3-201ENST00000285398 ANO6Q4KMQ2 910 aa12.32□□□□□ -0.44
ERCC3-201ENST00000285398 CCDC24Q8N4L8 307 aa12.32□□□□□ -0.44
ERCC3-201ENST00000285398 TDRD7Q8NHU6 1098 aaKnown RBP12.32□□□□□ -0.44
ERCC3-201ENST00000285398 COL15A1P39059 1388 aa12.32□□□□□ -0.44
ERCC3-201ENST00000285398 N4BP2Q86UW6 1770 aaPredicted RBP12.32□□□□□ -0.44
ERCC3-201ENST00000285398 CAMTA2O94983 1202 aa12.32□□□□□ -0.44
ERCC3-201ENST00000285398 CAVIN2O95810 425 aa12.32□□□□□ -0.44
ERCC3-201ENST00000285398 GJB2P29033 226 aa12.32□□□□□ -0.44
ERCC3-201ENST00000285398 CDC25BP30305 580 aa12.32□□□□□ -0.44
ERCC3-201ENST00000285398 TXNRD1Q16881 649 aa12.32□□□□□ -0.44
ERCC3-201ENST00000285398 FBXO38Q6PIJ6 1188 aa12.32□□□□□ -0.44
ERCC3-201ENST00000285398 CACTINQ8WUQ7 758 aaKnown RBP12.32□□□□□ -0.44
ERCC3-201ENST00000285398 KIF1BPQ96EK5 621 aa12.32□□□□□ -0.44
ERCC3-201ENST00000285398 LSG1Q9H089 658 aaKnown RBP12.32□□□□□ -0.44
ERCC3-201ENST00000285398 ELP1O95163 1332 aa12.32□□□□□ -0.44
ERCC3-201ENST00000285398 ARFGEF2Q9Y6D5 1785 aa12.32□□□□□ -0.44
ERCC3-201ENST00000285398 BMS1Q14692 1282 aaKnown RBP12.31□□□□□ -0.44
ERCC3-201ENST00000285398 NOL10Q9BSC4 688 aaKnown RBP12.31□□□□□ -0.44
ERCC3-201ENST00000285398 IL1RAPL2Q9NP60 686 aa12.31□□□□□ -0.44
ERCC3-201ENST00000285398 SURF6O75683 361 aaKnown RBP12.31□□□□□ -0.44
ERCC3-201ENST00000285398 CAMK4Q16566 473 aa12.31□□□□□ -0.44
ERCC3-201ENST00000285398 USPL1Q5W0Q7 1092 aa12.31□□□□□ -0.44
ERCC3-201ENST00000285398 NUTM1Q86Y26 1132 aa12.31□□□□□ -0.44
ERCC3-201ENST00000285398 RASEFQ8IZ41 740 aa12.31□□□□□ -0.44
ERCC3-201ENST00000285398 ISCA1Q9BUE6 129 aa12.31□□□□□ -0.44
ERCC3-201ENST00000285398 SH2B1Q9NRF2 756 aaPredicted RBP12.31□□□□□ -0.44
ERCC3-201ENST00000285398 DDX19AQ9NUU7 478 aaKnown RBP12.31□□□□□ -0.44
ERCC3-201ENST00000285398 BCCIPQ9P287 314 aaKnown RBP eCLIP12.31□□□□□ -0.44
ERCC3-201ENST00000285398 GOLGA6L4A6NEF3 574 aa12.3□□□□□ -0.44
ERCC3-201ENST00000285398 KIF2AO00139 706 aaPredicted RBP12.3□□□□□ -0.44
ERCC3-201ENST00000285398 HSP90B1P14625 803 aaKnown RBP12.3□□□□□ -0.44
ERCC3-201ENST00000285398 NLRP10Q86W26 655 aa12.3□□□□□ -0.44
ERCC3-201ENST00000285398 ARHGEF1Q92888 912 aaKnown RBP12.3□□□□□ -0.44
ERCC3-201ENST00000285398 ZSCAN31Q96LW9 406 aaPredicted RBP12.3□□□□□ -0.44
ERCC3-201ENST00000285398 AK7Q96M32 723 aa12.3□□□□□ -0.44
ERCC3-201ENST00000285398 SLU7O95391 586 aaKnown RBP12.3□□□□□ -0.44
ERCC3-201ENST00000285398 LARGE1O95461 756 aa12.3□□□□□ -0.44
ERCC3-201ENST00000285398 CYP2C19P33261 490 aa12.3□□□□□ -0.44
ERCC3-201ENST00000285398 CASP7P55210 303 aa12.3□□□□□ -0.44
ERCC3-201ENST00000285398 LMBR1LQ6UX01 489 aa12.3□□□□□ -0.44
ERCC3-201ENST00000285398 NYAP1Q6ZVC0 841 aa12.3□□□□□ -0.44
ERCC3-201ENST00000285398 LRRC8AQ8IWT6 810 aa12.3□□□□□ -0.44
ERCC3-201ENST00000285398 TRMT112Q9UI30 125 aaKnown RBP12.3□□□□□ -0.44
ERCC3-201ENST00000285398 NIP7Q9Y221 180 aaKnown RBP eCLIP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms