RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 ZNF512BQ96KM6 892 aaPredicted RBP23.05■■□□□ 1.28
PDLIM3-202ENST00000284770 PPP1R1BQ9UD71 204 aaPredicted RBP23.05■■□□□ 1.28
PDLIM3-202ENST00000284770 DLEC1Q9Y238 1755 aa23.05■■□□□ 1.28
PDLIM3-202ENST00000284770 TRIM6-TRIM34B2RNG4 842 aa23.04■■□□□ 1.28
PDLIM3-202ENST00000284770 ATP2B4P23634 1241 aa23.04■■□□□ 1.28
PDLIM3-202ENST00000284770 TTLL6Q8N841 843 aa23.04■■□□□ 1.28
PDLIM3-202ENST00000284770 HAUS7Q99871 368 aa23.04■■□□□ 1.28
PDLIM3-202ENST00000284770 GGA1Q9UJY5 639 aa23.04■■□□□ 1.28
PDLIM3-202ENST00000284770 MAP4K4O95819 1239 aaPredicted RBP23.03■■□□□ 1.28
PDLIM3-202ENST00000284770 PHKA1P46020 1223 aa23.03■■□□□ 1.28
PDLIM3-202ENST00000284770 BCAMP50895 628 aa23.03■■□□□ 1.28
PDLIM3-202ENST00000284770 C7orf43Q8WVR3 580 aa23.03■■□□□ 1.28
PDLIM3-202ENST00000284770 ARID4AP29374 1257 aaPredicted RBP23.02■■□□□ 1.28
PDLIM3-202ENST00000284770 CAVIN4Q5BKX8 364 aa23.02■■□□□ 1.28
PDLIM3-202ENST00000284770 OLFM4Q6UX06 510 aa23.02■■□□□ 1.28
PDLIM3-202ENST00000284770 RILPL2Q969X0 211 aa23.02■■□□□ 1.28
PDLIM3-202ENST00000284770 SLX4Q8IY92 1834 aa23.02■■□□□ 1.28
PDLIM3-202ENST00000284770 IRS2Q9Y4H2 1338 aa23.02■■□□□ 1.28
PDLIM3-202ENST00000284770 UFL1O94874 794 aa23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 UQCRFS1P1P0C7P4 283 aa23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 CNTROBQ8N137 903 aa23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 KLHL34Q8N239 644 aa23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 MPNDQ8N594 471 aa23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 TBC1D16Q8TBP0 767 aa23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 FAM84BQ96KN1 310 aaPredicted RBP23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 PIM2Q9P1W9 311 aa23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 POLLQ9UGP5 575 aa23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 KIAA1551Q9HCM1 1747 aa23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 KLRK1P26718 216 aa23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 GYG1P46976 350 aa23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 CC2D2BQ6DHV5 1058 aa23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 C15orf52Q6ZUT6 534 aaKnown RBP23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 FBXO33Q7Z6M2 555 aa23.01■■□□□ 1.27
PDLIM3-202ENST00000284770 DPP8Q6V1X1 898 aaPredicted RBP23■■□□□ 1.27
PDLIM3-202ENST00000284770 EVI5LQ96CN4 794 aa23■■□□□ 1.27
PDLIM3-202ENST00000284770 LTBP1Q14766 1721 aa23■■□□□ 1.27
PDLIM3-202ENST00000284770 CACNA1SQ13698 1873 aa23■■□□□ 1.27
PDLIM3-202ENST00000284770 MCAMP43121 646 aa22.99■■□□□ 1.27
PDLIM3-202ENST00000284770 SCARF1Q14162 830 aa22.99■■□□□ 1.27
PDLIM3-202ENST00000284770 VPS37DQ86XT2 251 aa22.99■■□□□ 1.27
PDLIM3-202ENST00000284770 DNAJC2Q99543 621 aaKnown RBP22.99■■□□□ 1.27
PDLIM3-202ENST00000284770 TXNRD3Q86VQ6 643 aa22.99■■□□□ 1.27
PDLIM3-202ENST00000284770 GNL3LQ9NVN8 582 aaKnown RBP22.99■■□□□ 1.27
PDLIM3-202ENST00000284770 ZNF219Q9P2Y4 722 aaPredicted RBP22.99■■□□□ 1.27
PDLIM3-202ENST00000284770 C6orf229H3BNL8 230 aa22.98■■□□□ 1.27
PDLIM3-202ENST00000284770 SOCS7O14512 581 aa22.98■■□□□ 1.27
PDLIM3-202ENST00000284770 CDC45O75419 566 aa22.98■■□□□ 1.27
PDLIM3-202ENST00000284770 HIBADHP31937 336 aaKnown RBP22.98■■□□□ 1.27
PDLIM3-202ENST00000284770 NDUFB9Q9Y6M9 179 aa22.98■■□□□ 1.27
PDLIM3-202ENST00000284770 C21orf2O43822 256 aa22.97■■□□□ 1.27
PDLIM3-202ENST00000284770 FKBP4Q02790 459 aaKnown RBP eCLIP22.97■■□□□ 1.27
PDLIM3-202ENST00000284770 GRIPAP1Q4V328 841 aa22.97■■□□□ 1.27
PDLIM3-202ENST00000284770 PAG1Q9NWQ8 432 aa22.97■■□□□ 1.27
PDLIM3-202ENST00000284770 AK9Q5TCS8 1911 aa22.97■■□□□ 1.27
PDLIM3-202ENST00000284770 RASGRF1Q13972 1273 aa22.96■■□□□ 1.27
PDLIM3-202ENST00000284770 EDC3Q96F86 508 aaKnown RBP22.96■■□□□ 1.27
PDLIM3-202ENST00000284770 GPR101Q96P66 508 aaPredicted RBP22.96■■□□□ 1.27
PDLIM3-202ENST00000284770 SNRKQ9NRH2 765 aa22.96■■□□□ 1.27
PDLIM3-202ENST00000284770 MED23Q9ULK4 1368 aa22.96■■□□□ 1.27
PDLIM3-202ENST00000284770 SEC24BO95487 1268 aa22.96■■□□□ 1.27
PDLIM3-202ENST00000284770 DALRD3Q5D0E6 543 aaKnown RBP22.96■■□□□ 1.27
PDLIM3-202ENST00000284770 HMG20BQ9P0W2 317 aa22.96■■□□□ 1.27
PDLIM3-202ENST00000284770 DUOX1Q9NRD9 1551 aa22.95■■□□□ 1.26
PDLIM3-202ENST00000284770 SNED1Q8TER0 1413 aa22.95■■□□□ 1.26
PDLIM3-202ENST00000284770 GOLIM4O00461 696 aa22.95■■□□□ 1.26
PDLIM3-202ENST00000284770 ZBTB22O15209 634 aa22.95■■□□□ 1.26
PDLIM3-202ENST00000284770 ZAP70P43403 619 aa22.95■■□□□ 1.26
PDLIM3-202ENST00000284770 PI16Q6UXB8 463 aa22.95■■□□□ 1.26
PDLIM3-202ENST00000284770 TBC1D9Q6ZT07 1266 aa22.95■■□□□ 1.26
PDLIM3-202ENST00000284770 SPATA5Q8NB90 893 aa22.95■■□□□ 1.26
PDLIM3-202ENST00000284770 RTFDC1Q9BY42 306 aaPredicted RBP22.95■■□□□ 1.26
PDLIM3-202ENST00000284770 ZNF804AQ7Z570 1209 aa22.94■■□□□ 1.26
PDLIM3-202ENST00000284770 SEMA3EO15041 775 aa22.94■■□□□ 1.26
PDLIM3-202ENST00000284770 CCDC93Q567U6 631 aa22.94■■□□□ 1.26
PDLIM3-202ENST00000284770 SOGA3Q5TF21 947 aa22.94■■□□□ 1.26
PDLIM3-202ENST00000284770 RTKN2Q8IZC4 609 aa22.94■■□□□ 1.26
PDLIM3-202ENST00000284770 CASC1Q6TDU7 716 aa22.93■■□□□ 1.26
PDLIM3-202ENST00000284770 KBTBD3Q8NAB2 608 aa22.93■■□□□ 1.26
PDLIM3-202ENST00000284770 NLGN2Q8NFZ4 835 aa22.93■■□□□ 1.26
PDLIM3-202ENST00000284770 EYA3Q99504 573 aa22.93■■□□□ 1.26
PDLIM3-202ENST00000284770 FSD1Q9BTV5 496 aa22.93■■□□□ 1.26
PDLIM3-202ENST00000284770 ANTXR1Q9H6X2 564 aa22.93■■□□□ 1.26
PDLIM3-202ENST00000284770 DENND2AQ9ULE3 1009 aa22.93■■□□□ 1.26
PDLIM3-202ENST00000284770 IQSEC3Q9UPP2 1182 aaPredicted RBP22.93■■□□□ 1.26
PDLIM3-202ENST00000284770 AKAP11Q9UKA4 1901 aa22.92■■□□□ 1.26
PDLIM3-202ENST00000284770 CYP2E1P05181 493 aaPredicted RBP22.92■■□□□ 1.26
PDLIM3-202ENST00000284770 CHMLP26374 656 aa22.92■■□□□ 1.26
PDLIM3-202ENST00000284770 WASHC4Q2M389 1173 aa22.92■■□□□ 1.26
PDLIM3-202ENST00000284770 TICAM2Q86XR7 235 aa22.92■■□□□ 1.26
PDLIM3-202ENST00000284770 ZC3H12CQ9C0D7 883 aaKnown RBP22.92■■□□□ 1.26
PDLIM3-202ENST00000284770 TTF1Q15361 905 aaPredicted RBP22.91■■□□□ 1.26
PDLIM3-202ENST00000284770 FHDC1Q9C0D6 1143 aaPredicted RBP22.91■■□□□ 1.26
PDLIM3-202ENST00000284770 BRCA1P38398 1863 aaKnown RBP22.91■■□□□ 1.26
PDLIM3-202ENST00000284770 FRAT2O75474 233 aaPredicted RBP22.91■■□□□ 1.26
PDLIM3-202ENST00000284770 SUPT20HQ8NEM7 779 aa22.91■■□□□ 1.26
PDLIM3-202ENST00000284770 TDRD7Q8NHU6 1098 aaKnown RBP22.91■■□□□ 1.26
PDLIM3-202ENST00000284770 CD209Q9NNX6 404 aa22.91■■□□□ 1.26
PDLIM3-202ENST00000284770 RIMBP2O15034 1052 aa22.9■■□□□ 1.26
PDLIM3-202ENST00000284770 WWC3Q9ULE0 1092 aa22.9■■□□□ 1.26
PDLIM3-202ENST00000284770 PDS5AQ29RF7 1337 aaKnown RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms