RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 THSD7BQ9C0I4 1608 aa22.29■■□□□ 1.16
CSNK1D-201ENST00000269361 SCARF1Q14162 830 aa22.29■■□□□ 1.16
CSNK1D-201ENST00000269361 C2orf69Q8N8R5 385 aa22.29■■□□□ 1.16
CSNK1D-201ENST00000269361 MPHOSPH8Q99549 860 aa22.29■■□□□ 1.16
CSNK1D-201ENST00000269361 ANKRD2Q9GZV1 360 aa22.29■■□□□ 1.16
CSNK1D-201ENST00000269361 GBA2Q9HCG7 927 aaPredicted RBP22.29■■□□□ 1.16
CSNK1D-201ENST00000269361 F6X3S4 739 aa22.28■■□□□ 1.16
CSNK1D-201ENST00000269361 BEND3Q5T5X7 828 aa22.28■■□□□ 1.16
CSNK1D-201ENST00000269361 COA1Q9GZY4 146 aa22.28■■□□□ 1.16
CSNK1D-201ENST00000269361 MYOZ2Q9NPC6 264 aa22.28■■□□□ 1.16
CSNK1D-201ENST00000269361 SCN9AQ15858 1988 aa22.27■■□□□ 1.16
CSNK1D-201ENST00000269361 BRPF1P55201 1214 aaPredicted RBP22.27■■□□□ 1.16
CSNK1D-201ENST00000269361 DACT2Q5SW24 774 aa22.27■■□□□ 1.16
CSNK1D-201ENST00000269361 ANGEL2Q5VTE6 544 aaKnown RBP22.27■■□□□ 1.16
CSNK1D-201ENST00000269361 TXNRD3Q86VQ6 643 aa22.27■■□□□ 1.16
CSNK1D-201ENST00000269361 ZNF804BA4D1E1 1349 aa22.27■■□□□ 1.16
CSNK1D-201ENST00000269361 CA12O43570 354 aa22.26■■□□□ 1.15
CSNK1D-201ENST00000269361 NOGQ13253 232 aa22.26■■□□□ 1.15
CSNK1D-201ENST00000269361 ANKRD18BA2A2Z9 1011 aa22.25■■□□□ 1.15
CSNK1D-201ENST00000269361 FOXO4P98177 505 aa22.25■■□□□ 1.15
CSNK1D-201ENST00000269361 STRIP1Q5VSL9 837 aa22.25■■□□□ 1.15
CSNK1D-201ENST00000269361 RGMBQ6NW40 437 aa22.25■■□□□ 1.15
CSNK1D-201ENST00000269361 CDCA5Q96FF9 252 aa22.25■■□□□ 1.15
CSNK1D-201ENST00000269361 MXD3Q9BW11 206 aa22.25■■□□□ 1.15
CSNK1D-201ENST00000269361 TSKSQ9UJT2 592 aa22.25■■□□□ 1.15
CSNK1D-201ENST00000269361 KLRK1P26718 216 aa22.24■■□□□ 1.15
CSNK1D-201ENST00000269361 CHRNDQ07001 517 aa22.24■■□□□ 1.15
CSNK1D-201ENST00000269361 FBXW7Q969H0 707 aa22.24■■□□□ 1.15
CSNK1D-201ENST00000269361 ZIC5Q96T25 663 aa22.24■■□□□ 1.15
CSNK1D-201ENST00000269361 KCNJ4P48050 445 aa22.23■■□□□ 1.15
CSNK1D-201ENST00000269361 IFIT5Q13325 482 aaKnown RBP22.23■■□□□ 1.15
CSNK1D-201ENST00000269361 OGFOD1Q8N543 542 aa22.23■■□□□ 1.15
CSNK1D-201ENST00000269361 CCDC102AQ96A19 550 aa22.23■■□□□ 1.15
CSNK1D-201ENST00000269361 FAM155AB1AL88 458 aaPredicted RBP22.22■■□□□ 1.15
CSNK1D-201ENST00000269361 ZNF157P51786 506 aaPredicted RBP22.22■■□□□ 1.15
CSNK1D-201ENST00000269361 MYO3BQ8WXR4 1341 aa22.22■■□□□ 1.15
CSNK1D-201ENST00000269361 PITPNM2Q9BZ72 1349 aa22.22■■□□□ 1.15
CSNK1D-201ENST00000269361 GRM8O00222 908 aa22.21■■□□□ 1.15
CSNK1D-201ENST00000269361 NBPF9Q3BBW0 867 aa22.21■■□□□ 1.15
CSNK1D-201ENST00000269361 TTLL5Q6EMB2 1281 aa22.21■■□□□ 1.15
CSNK1D-201ENST00000269361 CHMP3Q9Y3E7 222 aa22.21■■□□□ 1.15
CSNK1D-201ENST00000269361 EPHA10Q5JZY3 1008 aa22.2■■□□□ 1.14
CSNK1D-201ENST00000269361 LMBR1LQ6UX01 489 aa22.2■■□□□ 1.14
CSNK1D-201ENST00000269361 SNAP23O00161 211 aa22.19■■□□□ 1.14
CSNK1D-201ENST00000269361 TAF5LO75529 589 aa22.19■■□□□ 1.14
CSNK1D-201ENST00000269361 ALDH1L1O75891 902 aa22.19■■□□□ 1.14
CSNK1D-201ENST00000269361 MMP14P50281 582 aa22.19■■□□□ 1.14
CSNK1D-201ENST00000269361 HELBQ8NG08 1087 aaPredicted RBP22.19■■□□□ 1.14
CSNK1D-201ENST00000269361 ABHD8Q96I13 439 aa22.19■■□□□ 1.14
CSNK1D-201ENST00000269361 C9orf78Q9NZ63 289 aaPredicted RBP22.19■■□□□ 1.14
CSNK1D-201ENST00000269361 ZNF521Q96K83 1311 aa22.19■■□□□ 1.14
CSNK1D-201ENST00000269361 MYH3P11055 1940 aa22.19■■□□□ 1.14
CSNK1D-201ENST00000269361 FKBP1BP68106 108 aa22.18■■□□□ 1.14
CSNK1D-201ENST00000269361 GTF2IP78347 998 aa22.18■■□□□ 1.14
CSNK1D-201ENST00000269361 KIF23Q02241 960 aaPredicted RBP22.18■■□□□ 1.14
CSNK1D-201ENST00000269361 SLC4A10Q6U841 1118 aa22.18■■□□□ 1.14
CSNK1D-201ENST00000269361 C15orf52Q6ZUT6 534 aaKnown RBP22.18■■□□□ 1.14
CSNK1D-201ENST00000269361 CD209Q9NNX6 404 aa22.18■■□□□ 1.14
CSNK1D-201ENST00000269361 SCAF8Q9UPN6 1271 aaKnown RBP22.18■■□□□ 1.14
CSNK1D-201ENST00000269361 IRS2Q9Y4H2 1338 aa22.17■■□□□ 1.14
CSNK1D-201ENST00000269361 WNT10BO00744 389 aa22.17■■□□□ 1.14
CSNK1D-201ENST00000269361 CCDC57Q2TAC2 916 aa22.17■■□□□ 1.14
CSNK1D-201ENST00000269361 SRCIN1Q9C0H9 1055 aa22.17■■□□□ 1.14
CSNK1D-201ENST00000269361 SLC10A3P09131 477 aa22.16■■□□□ 1.14
CSNK1D-201ENST00000269361 KIAA0825Q8IV33 1275 aa22.16■■□□□ 1.14
CSNK1D-201ENST00000269361 HDAC9Q9UKV0 1011 aa22.16■■□□□ 1.14
CSNK1D-201ENST00000269361 PSME4Q14997 1843 aa22.15■■□□□ 1.14
CSNK1D-201ENST00000269361 SPEF2Q9C093 1822 aa22.15■■□□□ 1.14
CSNK1D-201ENST00000269361 TAF7LQ5H9L4 462 aa22.15■■□□□ 1.14
CSNK1D-201ENST00000269361 PRAMEF18Q5VWM3 479 aa22.15■■□□□ 1.14
CSNK1D-201ENST00000269361 LDHAL6AQ6ZMR3 332 aa22.15■■□□□ 1.14
CSNK1D-201ENST00000269361 ZNF594Q96JF6 807 aaPredicted RBP22.15■■□□□ 1.14
CSNK1D-201ENST00000269361 SASH1O94885 1247 aa22.14■■□□□ 1.13
CSNK1D-201ENST00000269361 CACNA1FO60840 1977 aa22.13■■□□□ 1.13
CSNK1D-201ENST00000269361 MOB2Q70IA6 237 aa22.13■■□□□ 1.13
CSNK1D-201ENST00000269361 ZNF804AQ7Z570 1209 aa22.13■■□□□ 1.13
CSNK1D-201ENST00000269361 CNNM1Q9NRU3 951 aa22.13■■□□□ 1.13
CSNK1D-201ENST00000269361 SAGE1Q9NXZ1 904 aa22.13■■□□□ 1.13
CSNK1D-201ENST00000269361 POLR2AP24928 1970 aaKnown RBP22.12■■□□□ 1.13
CSNK1D-201ENST00000269361 PLIN1O60240 522 aa22.12■■□□□ 1.13
CSNK1D-201ENST00000269361 IL1R1P14778 569 aa22.12■■□□□ 1.13
CSNK1D-201ENST00000269361 RASAL3Q86YV0 1011 aa22.12■■□□□ 1.13
CSNK1D-201ENST00000269361 CERS5Q8N5B7 392 aa22.12■■□□□ 1.13
CSNK1D-201ENST00000269361 MRPL50Q8N5N7 158 aaKnown RBP22.12■■□□□ 1.13
CSNK1D-201ENST00000269361 ZBED3Q96IU2 234 aaPredicted RBP22.12■■□□□ 1.13
CSNK1D-201ENST00000269361 CSRNP1Q96S65 589 aa22.12■■□□□ 1.13
CSNK1D-201ENST00000269361 UBE2Q2LH0YL09 131 aa22.11■■□□□ 1.13
CSNK1D-201ENST00000269361 KAZALD1Q96I82 304 aa22.11■■□□□ 1.13
CSNK1D-201ENST00000269361 SUCLG2Q96I99 432 aa22.11■■□□□ 1.13
CSNK1D-201ENST00000269361 RNF186Q9NXI6 227 aa22.11■■□□□ 1.13
CSNK1D-201ENST00000269361 E9PSI1 815 aa22.1■■□□□ 1.13
CSNK1D-201ENST00000269361 NBPF7P0C2Y1 421 aaPredicted RBP22.1■■□□□ 1.13
CSNK1D-201ENST00000269361 NF2P35240 595 aa22.1■■□□□ 1.13
CSNK1D-201ENST00000269361 APOBEC3FQ8IUX4 373 aaKnown RBP22.1■■□□□ 1.13
CSNK1D-201ENST00000269361 REM2Q8IYK8 340 aaPredicted RBP22.1■■□□□ 1.13
CSNK1D-201ENST00000269361 UTYO14607 1347 aa22.09■■□□□ 1.13
CSNK1D-201ENST00000269361 TRPA1O75762 1119 aa22.09■■□□□ 1.13
CSNK1D-201ENST00000269361 TTLL12Q14166 644 aaPredicted RBP22.09■■□□□ 1.13
CSNK1D-201ENST00000269361 DLGAP5Q15398 846 aa22.09■■□□□ 1.13
CSNK1D-201ENST00000269361 FKBP1AP62942 108 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms