RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 TPD52P55327 224 aaPredicted RBP19.06■□□□□ 0.64
TSPAN3-201ENST00000267970 RAPGEF1Q13905 1077 aa19.06■□□□□ 0.64
TSPAN3-201ENST00000267970 HFM1A2PYH4 1435 aa19.06■□□□□ 0.64
TSPAN3-201ENST00000267970 IFI16Q16666 785 aaKnown RBP19.06■□□□□ 0.64
TSPAN3-201ENST00000267970 EHBP1Q8NDI1 1231 aa19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 ACSBG1Q96GR2 724 aa19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 SEPT6Q14141 434 aa19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 ANKS4BQ8N8V4 417 aa19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 RASAL2Q9UJF2 1139 aa19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 OPA1O60313 960 aa19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 IVLP07476 585 aa19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 NAPAP54920 295 aa19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 AK2P54819 239 aa19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 ANKLE2Q86XL3 938 aa19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 DCAF17Q5H9S7 520 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 PROCA1Q8NCQ7 364 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 HELBQ8NG08 1087 aaPredicted RBP19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 RMND1Q9NWS8 449 aa19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 SSX2IPQ9Y2D8 614 aa19.05■□□□□ 0.64
TSPAN3-201ENST00000267970 A0A1B0GVL5 298 aa19.04■□□□□ 0.64
TSPAN3-201ENST00000267970 CCDC94Q9BW85 323 aaPredicted RBP19.04■□□□□ 0.64
TSPAN3-201ENST00000267970 NDC80O14777 642 aa19.04■□□□□ 0.64
TSPAN3-201ENST00000267970 PTPRCP08575 1304 aa19.04■□□□□ 0.64
TSPAN3-201ENST00000267970 PPP1R7Q15435 360 aa19.04■□□□□ 0.64
TSPAN3-201ENST00000267970 SMARCA4P51532 1647 aa19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 KIF5AQ12840 1032 aa19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 PSMB7Q99436 277 aa19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 CTNND2Q9UQB3 1225 aa19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 VIMP08670 466 aaKnown RBP19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 PDE1AP54750 535 aa19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 ATP2B3Q16720 1220 aa19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 SMC6Q96SB8 1091 aa19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 SEPT14Q6ZU15 432 aa19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 STXBP4Q6ZWJ1 553 aa19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 NBPF11Q86T75 865 aa19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 ERICH3Q5RHP9 1530 aa19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 EBAG9O00559 213 aa19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 CCDC42Q96M95 316 aa19.03■□□□□ 0.64
TSPAN3-201ENST00000267970 CTAGE1Q96RT6 745 aa19.02■□□□□ 0.64
TSPAN3-201ENST00000267970 TCHPQ9BT92 498 aa19.02■□□□□ 0.64
TSPAN3-201ENST00000267970 CABP5Q9NP86 173 aa19.02■□□□□ 0.64
TSPAN3-201ENST00000267970 POLA1P09884 1462 aaPredicted RBP19.02■□□□□ 0.64
TSPAN3-201ENST00000267970 SPTLC2O15270 562 aa19.02■□□□□ 0.64
TSPAN3-201ENST00000267970 C8orf34Q49A92 452 aa19.02■□□□□ 0.64
TSPAN3-201ENST00000267970 KCNG4Q8TDN1 519 aa19.02■□□□□ 0.63
TSPAN3-201ENST00000267970 TRIM31Q9BZY9 425 aa19.02■□□□□ 0.63
TSPAN3-201ENST00000267970 PDE1CQ14123 709 aaPredicted RBP19.01■□□□□ 0.63
TSPAN3-201ENST00000267970 GBP6Q6ZN66 633 aa19.01■□□□□ 0.63
TSPAN3-201ENST00000267970 CCDC65Q8IXS2 484 aa19.01■□□□□ 0.63
TSPAN3-201ENST00000267970 KRT24Q2M2I5 525 aa19.01■□□□□ 0.63
TSPAN3-201ENST00000267970 MAP7D1Q3KQU3 841 aa19.01■□□□□ 0.63
TSPAN3-201ENST00000267970 SLC9C2Q5TAH2 1124 aa19.01■□□□□ 0.63
TSPAN3-201ENST00000267970 RPUSD2Q8IZ73 545 aaKnown RBP19.01■□□□□ 0.63
TSPAN3-201ENST00000267970 KCNH5Q8NCM2 988 aa19.01■□□□□ 0.63
TSPAN3-201ENST00000267970 VTI1AQ96AJ9 217 aa19.01■□□□□ 0.63
TSPAN3-201ENST00000267970 ADGRF5Q8IZF2 1346 aa19.01■□□□□ 0.63
TSPAN3-201ENST00000267970 DAPK1P53355 1430 aa19.01■□□□□ 0.63
TSPAN3-201ENST00000267970 PPP1R21Q6ZMI0 780 aa19.01■□□□□ 0.63
TSPAN3-201ENST00000267970 CRNKL1Q9BZJ0 848 aaKnown RBP19■□□□□ 0.63
TSPAN3-201ENST00000267970 HARSP12081 509 aaKnown RBP19■□□□□ 0.63
TSPAN3-201ENST00000267970 TNNI2P48788 182 aa19■□□□□ 0.63
TSPAN3-201ENST00000267970 PSMA7O14818 248 aa19■□□□□ 0.63
TSPAN3-201ENST00000267970 RASA3Q14644 834 aa19■□□□□ 0.63
TSPAN3-201ENST00000267970 VPS16Q9H269 839 aa19■□□□□ 0.63
TSPAN3-201ENST00000267970 FAM114A2Q9NRY5 505 aa19■□□□□ 0.63
TSPAN3-201ENST00000267970 TTC21AQ8NDW8 1320 aa19■□□□□ 0.63
TSPAN3-201ENST00000267970 BAG3O95817 575 aa19■□□□□ 0.63
TSPAN3-201ENST00000267970 HMG20BQ9P0W2 317 aa19■□□□□ 0.63
TSPAN3-201ENST00000267970 KRT9P35527 623 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 EVCP57679 992 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 PSMD6Q15008 389 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 ZNF174Q15697 407 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 C8orf58Q8NAV2 365 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 NEK11Q8NG66 645 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 FERMT1Q9BQL6 677 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 RRAGDQ9NQL2 400 aaPredicted RBP18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 FAM13AO94988 1023 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 MCMDC2Q4G0Z9 681 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 XAGE3Q8WTP9 111 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 GDAP1L1Q96MZ0 367 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 RBSNQ9H1K0 784 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 PPP2R3AQ06190 1150 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 TSC1Q92574 1164 aa18.99■□□□□ 0.63
TSPAN3-201ENST00000267970 TTC36A6NLP5 189 aa18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 HLA-DOAP06340 250 aa18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 FAM173BQ6P4H8 233 aa18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 FAM76AQ8TAV0 307 aa18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 MIPOL1Q8TD10 442 aa18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 PPP1R12CQ9BZL4 782 aa18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 KRT86O43790 486 aa18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 PPP2R5CQ13362 524 aa18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 PPP2R5DQ14738 602 aa18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 NBPF7P0C2Y1 421 aaPredicted RBP18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 UTP14CQ5TAP6 766 aaKnown RBP18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 RBM26Q5T8P6 1007 aaKnown RBP18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 FBXO31Q5XUX0 539 aaPredicted RBP18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 DISP3Q9P2K9 1392 aa18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 NOL3O60936 208 aaKnown RBP18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 KRT5P13647 590 aa18.98■□□□□ 0.63
TSPAN3-201ENST00000267970 SREK1Q8WXA9 508 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms