RNA–Protein interactions for RNA: ENST00000265689.8

CHKA-201, Transcript of choline kinase alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHKA, Length 2,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-201ENST00000265689 CCDC24Q8N4L8 307 aa20.12■□□□□ 0.81
CHKA-201ENST00000265689 NEK1Q96PY6 1258 aa20.12■□□□□ 0.81
CHKA-201ENST00000265689 LRRC4BQ9NT99 713 aa20.12■□□□□ 0.81
CHKA-201ENST00000265689 SRP68Q9UHB9 627 aaKnown RBP20.12■□□□□ 0.81
CHKA-201ENST00000265689 MAST3O60307 1309 aa20.12■□□□□ 0.81
CHKA-201ENST00000265689 STX6O43752 255 aa20.12■□□□□ 0.81
CHKA-201ENST00000265689 ZAP70P43403 619 aa20.12■□□□□ 0.81
CHKA-201ENST00000265689 GRPEL1Q9HAV7 217 aa20.12■□□□□ 0.81
CHKA-201ENST00000265689 CCNL1Q9UK58 526 aaPredicted RBP20.12■□□□□ 0.81
CHKA-201ENST00000265689 M0R2C6 588 aa20.11■□□□□ 0.81
CHKA-201ENST00000265689 MRE11P49959 708 aa20.11■□□□□ 0.81
CHKA-201ENST00000265689 ALDH8A1Q9H2A2 487 aaPredicted RBP20.11■□□□□ 0.81
CHKA-201ENST00000265689 MYH3P11055 1940 aa20.11■□□□□ 0.81
CHKA-201ENST00000265689 ZSCAN22P10073 491 aaPredicted RBP20.11■□□□□ 0.81
CHKA-201ENST00000265689 TICAM2Q86XR7 235 aa20.11■□□□□ 0.81
CHKA-201ENST00000265689 VGLL2Q8N8G2 317 aa20.11■□□□□ 0.81
CHKA-201ENST00000265689 OSBP2Q969R2 916 aa20.11■□□□□ 0.81
CHKA-201ENST00000265689 NSFL1CQ9UNZ2 370 aaKnown RBP20.11■□□□□ 0.81
CHKA-201ENST00000265689 NHSQ6T4R5 1651 aa20.1■□□□□ 0.81
CHKA-201ENST00000265689 ANKRD1Q15327 319 aa20.1■□□□□ 0.81
CHKA-201ENST00000265689 DSCC1Q9BVC3 393 aa20.1■□□□□ 0.81
CHKA-201ENST00000265689 RBM27Q9P2N5 1060 aaKnown RBP20.1■□□□□ 0.81
CHKA-201ENST00000265689 A0A0G2JLW4 131 aa20.1■□□□□ 0.81
CHKA-201ENST00000265689 HSPD1P10809 573 aaKnown RBP20.1■□□□□ 0.81
CHKA-201ENST00000265689 STOX1Q6ZVD7 989 aa20.1■□□□□ 0.81
CHKA-201ENST00000265689 GDPD2Q9HCC8 539 aa20.1■□□□□ 0.81
CHKA-201ENST00000265689 GNPATO15228 680 aa20.09■□□□□ 0.81
CHKA-201ENST00000265689 SMARCC1Q92922 1105 aaPredicted RBP20.09■□□□□ 0.81
CHKA-201ENST00000265689 UTP14AQ9BVJ6 771 aaKnown RBP20.09■□□□□ 0.81
CHKA-201ENST00000265689 ISY1Q9ULR0 285 aaKnown RBP20.09■□□□□ 0.81
CHKA-201ENST00000265689 SPEF2Q9C093 1822 aa20.09■□□□□ 0.81
CHKA-201ENST00000265689 HELBQ8NG08 1087 aaPredicted RBP20.09■□□□□ 0.81
CHKA-201ENST00000265689 MCAMP43121 646 aa20.08■□□□□ 0.81
CHKA-201ENST00000265689 STK3Q13188 491 aa20.08■□□□□ 0.81
CHKA-201ENST00000265689 KRT27Q7Z3Y8 459 aa20.08■□□□□ 0.81
CHKA-201ENST00000265689 PDE8BO95263 885 aa20.08■□□□□ 0.8
CHKA-201ENST00000265689 WASHC4Q2M389 1173 aa20.08■□□□□ 0.8
CHKA-201ENST00000265689 ZSCAN23Q3MJ62 389 aa20.08■□□□□ 0.8
CHKA-201ENST00000265689 NIP7Q9Y221 180 aaKnown RBP eCLIP20.07■□□□□ 0.8
CHKA-201ENST00000265689 Q6ZUG5 572 aa20.07■□□□□ 0.8
CHKA-201ENST00000265689 LRRC2Q9BYS8 371 aa20.07■□□□□ 0.8
CHKA-201ENST00000265689 SEC31BQ9NQW1 1179 aa20.07■□□□□ 0.8
CHKA-201ENST00000265689 F13A1P00488 732 aa20.06■□□□□ 0.8
CHKA-201ENST00000265689 AK7Q96M32 723 aa20.06■□□□□ 0.8
CHKA-201ENST00000265689 MTMR6Q9Y217 621 aa20.06■□□□□ 0.8
CHKA-201ENST00000265689 RREB1Q92766 1687 aa20.06■□□□□ 0.8
CHKA-201ENST00000265689 TAF1P21675 1872 aa20.06■□□□□ 0.8
CHKA-201ENST00000265689 USP48Q86UV5 1035 aa20.06■□□□□ 0.8
CHKA-201ENST00000265689 RGS17Q9UGC6 210 aaPredicted RBP20.06■□□□□ 0.8
CHKA-201ENST00000265689 LRRFIP1Q32MZ4 808 aaKnown RBP20.05■□□□□ 0.8
CHKA-201ENST00000265689 PARP10Q53GL7 1025 aa20.05■□□□□ 0.8
CHKA-201ENST00000265689 TTLL5Q6EMB2 1281 aa20.05■□□□□ 0.8
CHKA-201ENST00000265689 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.05■□□□□ 0.8
CHKA-201ENST00000265689 CNPY2Q9Y2B0 182 aa20.05■□□□□ 0.8
CHKA-201ENST00000265689 ABCC12Q96J65 1359 aa20.05■□□□□ 0.8
CHKA-201ENST00000265689 ZFYP08048 801 aaPredicted RBP20.05■□□□□ 0.8
CHKA-201ENST00000265689 TMEM63CQ9P1W3 806 aa20.05■□□□□ 0.8
CHKA-201ENST00000265689 GADD45BO75293 160 aaPredicted RBP20.04■□□□□ 0.8
CHKA-201ENST00000265689 NTSR2O95665 410 aa20.04■□□□□ 0.8
CHKA-201ENST00000265689 PHKA1P46020 1223 aa20.04■□□□□ 0.8
CHKA-201ENST00000265689 ZNF445P59923 1031 aa20.04■□□□□ 0.8
CHKA-201ENST00000265689 PUS7LQ9H0K6 701 aaKnown RBP20.04■□□□□ 0.8
CHKA-201ENST00000265689 TAF1LQ8IZX4 1826 aa20.04■□□□□ 0.8
CHKA-201ENST00000265689 COL4A1P02462 1669 aa20.04■□□□□ 0.8
CHKA-201ENST00000265689 VPS37CA5D8V6 355 aaPredicted RBP20.04■□□□□ 0.8
CHKA-201ENST00000265689 SNAP23O00161 211 aa20.04■□□□□ 0.8
CHKA-201ENST00000265689 FOXP2O15409 715 aa20.04■□□□□ 0.8
CHKA-201ENST00000265689 CCDC102BQ68D86 513 aa20.04■□□□□ 0.8
CHKA-201ENST00000265689 APPBP2Q92624 585 aa20.03■□□□□ 0.8
CHKA-201ENST00000265689 BCL2L12Q9HB09 334 aa20.03■□□□□ 0.8
CHKA-201ENST00000265689 MROH5Q6ZUA9 1318 aa20.03■□□□□ 0.8
CHKA-201ENST00000265689 E7EWF7 191 aa20.03■□□□□ 0.8
CHKA-201ENST00000265689 MBD3O95983 291 aa20.03■□□□□ 0.8
CHKA-201ENST00000265689 PUM3Q15397 648 aaKnown RBP20.03■□□□□ 0.8
CHKA-201ENST00000265689 LARP1BQ659C4 914 aaKnown RBP20.03■□□□□ 0.8
CHKA-201ENST00000265689 FAM196AQ6ZSG2 479 aa20.03■□□□□ 0.8
CHKA-201ENST00000265689 C3orf67Q6ZVT6 689 aa20.03■□□□□ 0.8
CHKA-201ENST00000265689 BRF1Q92994 677 aa20.03■□□□□ 0.8
CHKA-201ENST00000265689 ZNF512BQ96KM6 892 aaPredicted RBP20.03■□□□□ 0.8
CHKA-201ENST00000265689 HSP90B1P14625 803 aaKnown RBP20.02■□□□□ 0.8
CHKA-201ENST00000265689 FGFR2P21802 821 aa20.02■□□□□ 0.8
CHKA-201ENST00000265689 TBC1D9BQ66K14 1250 aa20.02■□□□□ 0.8
CHKA-201ENST00000265689 DHX32Q7L7V1 743 aaKnown RBP20.02■□□□□ 0.8
CHKA-201ENST00000265689 LPIN2Q92539 896 aa20.02■□□□□ 0.8
CHKA-201ENST00000265689 MPHOSPH8Q99549 860 aa20.02■□□□□ 0.8
CHKA-201ENST00000265689 PIH1D3Q9NQM4 214 aaKnown RBP20.02■□□□□ 0.8
CHKA-201ENST00000265689 TCHHQ07283 1943 aa20.02■□□□□ 0.8
CHKA-201ENST00000265689 LRP5O75197 1615 aa20.02■□□□□ 0.8
CHKA-201ENST00000265689 CICQ96RK0 1608 aaPredicted RBP20.02■□□□□ 0.8
CHKA-201ENST00000265689 AKAP11Q9UKA4 1901 aa20.02■□□□□ 0.79
CHKA-201ENST00000265689 SLC51AQ86UW1 340 aa20.02■□□□□ 0.79
CHKA-201ENST00000265689 LY75O60449 1722 aa20.01■□□□□ 0.79
CHKA-201ENST00000265689 HMGB1P09429 215 aaKnown RBP20.01■□□□□ 0.79
CHKA-201ENST00000265689 FGD1P98174 961 aa20.01■□□□□ 0.79
CHKA-201ENST00000265689 POTEAQ6S8J7 498 aa20.01■□□□□ 0.79
CHKA-201ENST00000265689 CCDC152Q4G0S7 254 aa20.01■□□□□ 0.79
CHKA-201ENST00000265689 GTF3C6Q969F1 213 aa20.01■□□□□ 0.79
CHKA-201ENST00000265689 BCL11BQ9C0K0 894 aaPredicted RBP20.01■□□□□ 0.79
CHKA-201ENST00000265689 ARID4AP29374 1257 aaPredicted RBP20■□□□□ 0.79
CHKA-201ENST00000265689 EXOSC10Q01780 885 aaKnown RBP20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms