RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 KRT85P78386 507 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 CEBPZQ03701 1054 aaKnown RBP10.2□□□□□ -0.78
VAPB-201ENST00000265619 LONRF2Q1L5Z9 754 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 CCDC158Q5M9N0 1113 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 MMS22LQ6ZRQ5 1243 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 ANKRD24Q8TF21 1146 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 DDX11Q96FC9 970 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 SPATA32Q96LK8 384 aa10.2□□□□□ -0.78
VAPB-201ENST00000265619 ECM2O94769 699 aaPredicted RBP10.19□□□□□ -0.78
VAPB-201ENST00000265619 ANXA1P04083 346 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 ZNF853P0CG23 659 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 MAP2K2P36507 400 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 ETF1P62495 437 aaKnown RBP10.19□□□□□ -0.78
VAPB-201ENST00000265619 OS9Q13438 667 aaPredicted RBP10.19□□□□□ -0.78
VAPB-201ENST00000265619 SWT1Q5T5J6 900 aaKnown RBP10.19□□□□□ -0.78
VAPB-201ENST00000265619 CCDC91Q7Z6B0 441 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 BICD2Q8TD16 824 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 WDR24Q96S15 920 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 AXIN2Q9Y2T1 843 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 USP32Q8NFA0 1604 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 PNMA6EA0A0J9YXQ4 647 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 NEMFO60524 1076 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 LARP1BQ659C4 914 aaKnown RBP10.19□□□□□ -0.78
VAPB-201ENST00000265619 LEKR1Q6ZMV7 388 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 TMC6Q7Z403 805 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 MICALL1Q8N3F8 863 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 BICC1Q9H694 974 aaKnown RBP10.19□□□□□ -0.78
VAPB-201ENST00000265619 IL1RAPL2Q9NP60 686 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 KIAA0232Q92628 1395 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 SATB1Q01826 763 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 NUTM1Q86Y26 1132 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 PPM1EQ8WY54 764 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 LSG1Q9H089 658 aaKnown RBP10.19□□□□□ -0.78
VAPB-201ENST00000265619 GOLPH3LQ9H4A5 285 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 TPCN1Q9ULQ1 816 aa10.19□□□□□ -0.78
VAPB-201ENST00000265619 NOM1Q5C9Z4 860 aaKnown RBP10.18□□□□□ -0.78
VAPB-201ENST00000265619 CADPS2Q86UW7 1296 aa10.18□□□□□ -0.78
VAPB-201ENST00000265619 XPO4Q9C0E2 1151 aaKnown RBP10.18□□□□□ -0.78
VAPB-201ENST00000265619 ADGRL3Q9HAR2 1447 aa10.18□□□□□ -0.78
VAPB-201ENST00000265619 EFCAB8A8MWE9 144 aa10.18□□□□□ -0.78
VAPB-201ENST00000265619 MAP2K7O14733 419 aa10.18□□□□□ -0.78
VAPB-201ENST00000265619 TDO2P48775 406 aa10.18□□□□□ -0.78
VAPB-201ENST00000265619 LARP1Q6PKG0 1096 aaKnown RBP10.18□□□□□ -0.78
VAPB-201ENST00000265619 ARFGAP3Q9NP61 516 aa10.18□□□□□ -0.78
VAPB-201ENST00000265619 PRDM11Q9NQV5 511 aa10.18□□□□□ -0.78
VAPB-201ENST00000265619 GOLGA6L4A6NEF3 574 aa10.18□□□□□ -0.78
VAPB-201ENST00000265619 LIG3P49916 1009 aa10.18□□□□□ -0.78
VAPB-201ENST00000265619 PTH1RQ03431 593 aa10.18□□□□□ -0.78
VAPB-201ENST00000265619 TEFQ10587 303 aa10.18□□□□□ -0.78
VAPB-201ENST00000265619 ANKRD20A12PQ8NF67 263 aa10.18□□□□□ -0.78
VAPB-201ENST00000265619 DDX19AQ9NUU7 478 aaKnown RBP10.18□□□□□ -0.78
VAPB-201ENST00000265619 SBNO1A3KN83 1393 aa10.17□□□□□ -0.78
VAPB-201ENST00000265619 PNPLA6Q8IY17 1366 aa10.17□□□□□ -0.78
VAPB-201ENST00000265619 NUTM2BA6NNL0 878 aaPredicted RBP10.17□□□□□ -0.78
VAPB-201ENST00000265619 NUTM2EB1AL46 878 aaPredicted RBP10.17□□□□□ -0.78
VAPB-201ENST00000265619 APOBRQ0VD83 1088 aa10.17□□□□□ -0.78
VAPB-201ENST00000265619 PPP2R5AQ15172 486 aa10.17□□□□□ -0.78
VAPB-201ENST00000265619 NUTM2AQ8IVF1 878 aaPredicted RBP10.17□□□□□ -0.78
VAPB-201ENST00000265619 LGR6Q9HBX8 967 aa10.17□□□□□ -0.78
VAPB-201ENST00000265619 ZNF330Q9Y3S2 320 aaPredicted RBP10.17□□□□□ -0.78
VAPB-201ENST00000265619 OVOS2A0A0J9YW53 1432 aa10.17□□□□□ -0.78
VAPB-201ENST00000265619 OVOS2Q6IE36 1432 aa10.17□□□□□ -0.78
VAPB-201ENST00000265619 SLC4A2P04920 1241 aa10.17□□□□□ -0.78
VAPB-201ENST00000265619 C1orf141Q5JVX7 400 aa10.17□□□□□ -0.78
VAPB-201ENST00000265619 CPLX2Q6PUV4 134 aaKnown RBP10.17□□□□□ -0.78
VAPB-201ENST00000265619 RSRC2Q7L4I2 434 aaKnown RBP10.17□□□□□ -0.78
VAPB-201ENST00000265619 G2E3Q7L622 706 aa10.17□□□□□ -0.78
VAPB-201ENST00000265619 OSBPL5Q9H0X9 879 aaPredicted RBP10.17□□□□□ -0.78
VAPB-201ENST00000265619 RABEP2Q9H5N1 569 aa10.17□□□□□ -0.78
VAPB-201ENST00000265619 IFNKQ9P0W0 207 aa10.17□□□□□ -0.78
VAPB-201ENST00000265619 DHX8Q14562 1220 aaKnown RBP10.16□□□□□ -0.78
VAPB-201ENST00000265619 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.16□□□□□ -0.78
VAPB-201ENST00000265619 TADA2BQ86TJ2 420 aa10.16□□□□□ -0.78
VAPB-201ENST00000265619 MED4Q9NPJ6 270 aa10.16□□□□□ -0.78
VAPB-201ENST00000265619 TAF6LQ9Y6J9 622 aa10.16□□□□□ -0.78
VAPB-201ENST00000265619 BECN2A8MW95 431 aa10.16□□□□□ -0.78
VAPB-201ENST00000265619 KIF2AO00139 706 aaPredicted RBP10.16□□□□□ -0.78
VAPB-201ENST00000265619 ATP8B1O43520 1251 aa10.16□□□□□ -0.78
VAPB-201ENST00000265619 SMC2O95347 1197 aa10.16□□□□□ -0.78
VAPB-201ENST00000265619 CPP00450 1065 aa10.16□□□□□ -0.78
VAPB-201ENST00000265619 HNRNPH1P31943 449 aaKnown RBP10.16□□□□□ -0.78
VAPB-201ENST00000265619 ATP6V1AP38606 617 aa10.16□□□□□ -0.78
VAPB-201ENST00000265619 LRRFIP1Q32MZ4 808 aaKnown RBP10.16□□□□□ -0.78
VAPB-201ENST00000265619 KCNH5Q8NCM2 988 aa10.16□□□□□ -0.78
VAPB-201ENST00000265619 JAKMIP1Q96N16 626 aaKnown RBP10.16□□□□□ -0.78
VAPB-201ENST00000265619 PNKPQ96T60 521 aa10.16□□□□□ -0.78
VAPB-201ENST00000265619 CDK12Q9NYV4 1490 aaPredicted RBP10.16□□□□□ -0.78
VAPB-201ENST00000265619 GNAT3A8MTJ3 354 aa10.16□□□□□ -0.78
VAPB-201ENST00000265619 IVLP07476 585 aa10.16□□□□□ -0.78
VAPB-201ENST00000265619 PIP4K2AP48426 406 aaPredicted RBP10.16□□□□□ -0.78
VAPB-201ENST00000265619 RAPGEF4Q8WZA2 1011 aa10.16□□□□□ -0.78
VAPB-201ENST00000265619 SSH2Q76I76 1423 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 PSDA5PKW4 1024 aaPredicted RBP10.15□□□□□ -0.78
VAPB-201ENST00000265619 VWA3AA6NCI4 1184 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 MNAT1P51948 309 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 INHBEP58166 350 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 EVA1CP58658 441 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 VPS53Q5VIR6 699 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 CNNM3Q8NE01 707 aa10.15□□□□□ -0.78
VAPB-201ENST00000265619 DLG5Q8TDM6 1919 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms