RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PRPHP41219 470 aa16.2■□□□□ 0.18
CUX2-201ENST00000261726 DNAJC21Q5F1R6 531 aaKnown RBP16.2■□□□□ 0.18
CUX2-201ENST00000261726 TRIM27P14373 513 aa16.2■□□□□ 0.18
CUX2-201ENST00000261726 STMN4Q9H169 189 aaPredicted RBP16.2■□□□□ 0.18
CUX2-201ENST00000261726 KCNK9Q9NPC2 374 aa16.2■□□□□ 0.18
CUX2-201ENST00000261726 NOL3O60936 208 aaKnown RBP16.19■□□□□ 0.18
CUX2-201ENST00000261726 SNX16P57768 344 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 GTF2A1P52655 376 aaPredicted RBP16.19■□□□□ 0.18
CUX2-201ENST00000261726 TAF12Q16514 161 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 CCDC152Q4G0S7 254 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 OPA1O60313 960 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 ANXA1P04083 346 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 ZSCAN22P10073 491 aaPredicted RBP16.19■□□□□ 0.18
CUX2-201ENST00000261726 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.19■□□□□ 0.18
CUX2-201ENST00000261726 V9GYY5 206 aaPredicted RBP16.19■□□□□ 0.18
CUX2-201ENST00000261726 PTPRKQ15262 1439 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 SBNO2Q9Y2G9 1366 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 CTAGE9A4FU28 777 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 SLU7O95391 586 aaKnown RBP16.19■□□□□ 0.18
CUX2-201ENST00000261726 IFT81Q8WYA0 676 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 CCDC114Q96M63 670 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 PI4KAP2A4QPH2 592 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 MICALL1Q8N3F8 863 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 PI4KAP1Q8N8J0 262 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 FAM169AQ9Y6X4 670 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 CEP57Q86XR8 500 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 KRT222Q8N1A0 295 aa16.19■□□□□ 0.18
CUX2-201ENST00000261726 PSMA7O14818 248 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 CFAP157Q5JU67 520 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 CCDC121Q6ZUS5 278 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 GPATCH8Q9UKJ3 1502 aaKnown RBP16.18■□□□□ 0.18
CUX2-201ENST00000261726 UQCRFS1P1P0C7P4 283 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 UVSSAQ2YD98 709 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 POGZQ7Z3K3 1410 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 ATP2B3Q16720 1220 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 NCBP1Q09161 790 aaKnown RBP16.18■□□□□ 0.18
CUX2-201ENST00000261726 SYT1P21579 422 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 SP4Q02446 784 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 TTC22Q5TAA0 569 aa16.18■□□□□ 0.18
CUX2-201ENST00000261726 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.18■□□□□ 0.18
CUX2-201ENST00000261726 PROCA1Q8NCQ7 364 aaPredicted RBP16.17■□□□□ 0.18
CUX2-201ENST00000261726 ESR2Q92731 530 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 TLDC2A0PJX2 215 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 VEZTQ9HBM0 779 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 KARSQ15046 597 aaKnown RBP16.17■□□□□ 0.18
CUX2-201ENST00000261726 PPP1R7Q15435 360 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 Q6ZUG5 572 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 C6orf50Q9HD87 102 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 HDAC9Q9UKV0 1011 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 PHF8Q9UPP1 1060 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 ZEB2O60315 1214 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 RPUSD2Q8IZ73 545 aaKnown RBP16.17■□□□□ 0.18
CUX2-201ENST00000261726 LMBR1Q8WVP7 490 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 TTC14Q96N46 770 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 DNAJC25Q9H1X3 360 aa16.17■□□□□ 0.18
CUX2-201ENST00000261726 SEC62Q99442 399 aaKnown RBP16.17■□□□□ 0.18
CUX2-201ENST00000261726 RASA3Q14644 834 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 CCDC186Q7Z3E2 898 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 FAM83GA6ND36 823 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 RBM26Q5T8P6 1007 aaKnown RBP16.16■□□□□ 0.18
CUX2-201ENST00000261726 KCNG4Q8TDN1 519 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 ATP6V0A2Q9Y487 856 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 UBXN1Q04323 297 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 UAP1Q16222 522 aaPredicted RBP16.16■□□□□ 0.18
CUX2-201ENST00000261726 TMX3Q96JJ7 454 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 PPP1R9BQ96SB3 815 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 PLIN2Q99541 437 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 GUCA1BQ9UMX6 200 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 ABCC11Q96J66 1382 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 DYNC1I1O14576 645 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 STX17P56962 302 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 USP48Q86UV5 1035 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 MRPS27Q92552 414 aaKnown RBP16.16■□□□□ 0.18
CUX2-201ENST00000261726 ACSBG1Q96GR2 724 aa16.16■□□□□ 0.18
CUX2-201ENST00000261726 TEX13AQ9BXU3 409 aaPredicted RBP16.16■□□□□ 0.18
CUX2-201ENST00000261726 KIF5AQ12840 1032 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 IFNL2Q8IZJ0 200 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 MAK16Q9BXY0 300 aaKnown RBP16.15■□□□□ 0.18
CUX2-201ENST00000261726 PFDN4Q9NQP4 134 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 VPS18Q9P253 973 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 SPDYE3A6NKU9 549 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 GEN1Q17RS7 908 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 NEK11Q8NG66 645 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 IVLP07476 585 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 NUP160Q12769 1436 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 NAA16Q6N069 864 aaPredicted RBP16.15■□□□□ 0.18
CUX2-201ENST00000261726 CCDC65Q8IXS2 484 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 ZMYND15Q9H091 742 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 LZTFL1Q9NQ48 299 aa16.15■□□□□ 0.18
CUX2-201ENST00000261726 CPLX4Q7Z7G2 160 aa16.14■□□□□ 0.18
CUX2-201ENST00000261726 GOLGA1Q92805 767 aa16.14■□□□□ 0.18
CUX2-201ENST00000261726 PRIMPOLQ96LW4 560 aa16.14■□□□□ 0.18
CUX2-201ENST00000261726 TRIM7Q9C029 511 aa16.14■□□□□ 0.18
CUX2-201ENST00000261726 CEP83Q9Y592 693 aa16.14■□□□□ 0.18
CUX2-201ENST00000261726 PIK3R4Q99570 1358 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 CRCPO75575 148 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 BMP15O95972 392 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 RHOXF2BP0C7M4 288 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 MCM7P33993 719 aa16.14■□□□□ 0.17
CUX2-201ENST00000261726 TNNI2P48788 182 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms