RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 VPS33BQ9H267 617 aa25.49■■□□□ 1.67
RTCA-201ENST00000260563 WTIPA6NIX2 430 aaPredicted RBP25.48■■□□□ 1.67
RTCA-201ENST00000260563 KIAA2012Q0VF49 1180 aa25.48■■□□□ 1.67
RTCA-201ENST00000260563 ATP2B3Q16720 1220 aa25.48■■□□□ 1.67
RTCA-201ENST00000260563 KIF1BPQ96EK5 621 aa25.48■■□□□ 1.67
RTCA-201ENST00000260563 AKAP2Q9Y2D5 859 aa25.48■■□□□ 1.67
RTCA-201ENST00000260563 COL4A5P29400 1685 aa25.48■■□□□ 1.67
RTCA-201ENST00000260563 RIMBP2O15034 1052 aa25.47■■□□□ 1.67
RTCA-201ENST00000260563 NUCB1Q02818 461 aa25.47■■□□□ 1.67
RTCA-201ENST00000260563 RHPN1Q8TCX5 695 aa25.47■■□□□ 1.67
RTCA-201ENST00000260563 LPIN2Q92539 896 aa25.47■■□□□ 1.67
RTCA-201ENST00000260563 ZC3H12CQ9C0D7 883 aaKnown RBP25.47■■□□□ 1.67
RTCA-201ENST00000260563 PSME4Q14997 1843 aa25.47■■□□□ 1.67
RTCA-201ENST00000260563 IFIT1P09914 478 aaKnown RBP25.47■■□□□ 1.67
RTCA-201ENST00000260563 SLC5A1P13866 664 aa25.47■■□□□ 1.67
RTCA-201ENST00000260563 FGFR2P21802 821 aa25.47■■□□□ 1.67
RTCA-201ENST00000260563 PRELPP51888 382 aa25.47■■□□□ 1.67
RTCA-201ENST00000260563 ANKRD45Q5TZF3 282 aa25.47■■□□□ 1.67
RTCA-201ENST00000260563 LARGE2Q8N3Y3 721 aa25.47■■□□□ 1.67
RTCA-201ENST00000260563 KLRK1P26718 216 aa25.46■■□□□ 1.67
RTCA-201ENST00000260563 RNF181Q9P0P0 153 aa25.46■■□□□ 1.67
RTCA-201ENST00000260563 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.46■■□□□ 1.67
RTCA-201ENST00000260563 LRRCC1Q9C099 1032 aa25.45■■□□□ 1.66
RTCA-201ENST00000260563 GPR108Q9NPR9 543 aa25.45■■□□□ 1.66
RTCA-201ENST00000260563 IRS2Q9Y4H2 1338 aa25.45■■□□□ 1.66
RTCA-201ENST00000260563 A0A1B0GUL7 405 aa25.44■■□□□ 1.66
RTCA-201ENST00000260563 TNNI3KQ59H18 835 aa25.44■■□□□ 1.66
RTCA-201ENST00000260563 C15orf52Q6ZUT6 534 aaKnown RBP25.44■■□□□ 1.66
RTCA-201ENST00000260563 CHD1LQ86WJ1 897 aa25.44■■□□□ 1.66
RTCA-201ENST00000260563 FPGT-TNNI3KV9GXZ4 949 aa25.44■■□□□ 1.66
RTCA-201ENST00000260563 C9orf131Q5VYM1 1079 aa25.43■■□□□ 1.66
RTCA-201ENST00000260563 TXNRD3Q86VQ6 643 aa25.43■■□□□ 1.66
RTCA-201ENST00000260563 JDP2Q8WYK2 163 aa25.43■■□□□ 1.66
RTCA-201ENST00000260563 IL1RAPL2Q9NP60 686 aa25.43■■□□□ 1.66
RTCA-201ENST00000260563 SCN9AQ15858 1988 aa25.43■■□□□ 1.66
RTCA-201ENST00000260563 G3V3G9 751 aa25.42■■□□□ 1.66
RTCA-201ENST00000260563 DCAF8Q5TAQ9 597 aa25.42■■□□□ 1.66
RTCA-201ENST00000260563 ZNF804AQ7Z570 1209 aa25.42■■□□□ 1.66
RTCA-201ENST00000260563 NIM1KQ8IY84 436 aa25.42■■□□□ 1.66
RTCA-201ENST00000260563 ZBTB47Q9UFB7 747 aaPredicted RBP25.42■■□□□ 1.66
RTCA-201ENST00000260563 CLASRPQ8N2M8 674 aaKnown RBP25.42■■□□□ 1.66
RTCA-201ENST00000260563 NEUROD6Q96NK8 337 aa25.42■■□□□ 1.66
RTCA-201ENST00000260563 LNPKQ9C0E8 428 aa25.42■■□□□ 1.66
RTCA-201ENST00000260563 ZNF646O15015 1829 aaPredicted RBP25.41■■□□□ 1.66
RTCA-201ENST00000260563 TIMM10P62072 90 aa25.41■■□□□ 1.66
RTCA-201ENST00000260563 CAVIN4Q5BKX8 364 aa25.41■■□□□ 1.66
RTCA-201ENST00000260563 SKAP1Q86WV1 359 aa25.41■■□□□ 1.66
RTCA-201ENST00000260563 DBNDD1Q9H9R9 158 aa25.41■■□□□ 1.66
RTCA-201ENST00000260563 ECE2O60344 883 aa25.4■■□□□ 1.66
RTCA-201ENST00000260563 GYG1P46976 350 aa25.4■■□□□ 1.66
RTCA-201ENST00000260563 DOK7Q18PE1 504 aa25.4■■□□□ 1.66
RTCA-201ENST00000260563 VPS37DQ86XT2 251 aa25.4■■□□□ 1.66
RTCA-201ENST00000260563 BCL11AQ9H165 835 aa25.4■■□□□ 1.66
RTCA-201ENST00000260563 SMARCA5O60264 1052 aaPredicted RBP25.39■■□□□ 1.66
RTCA-201ENST00000260563 AACSQ86V21 672 aa25.39■■□□□ 1.66
RTCA-201ENST00000260563 XAGE2Q96GT9 111 aa25.39■■□□□ 1.66
RTCA-201ENST00000260563 COA1Q9GZY4 146 aa25.39■■□□□ 1.66
RTCA-201ENST00000260563 ADORA1P30542 326 aa25.38■■□□□ 1.65
RTCA-201ENST00000260563 HIBADHP31937 336 aaKnown RBP25.38■■□□□ 1.65
RTCA-201ENST00000260563 EAF2Q96CJ1 260 aaPredicted RBP25.38■■□□□ 1.65
RTCA-201ENST00000260563 FAM84BQ96KN1 310 aaPredicted RBP25.38■■□□□ 1.65
RTCA-201ENST00000260563 ZC3H4Q9UPT8 1303 aaKnown RBP25.37■■□□□ 1.65
RTCA-201ENST00000260563 GORABQ5T7V8 394 aa25.37■■□□□ 1.65
RTCA-201ENST00000260563 CCDC8Q9H0W5 538 aaPredicted RBP25.37■■□□□ 1.65
RTCA-201ENST00000260563 CD209Q9NNX6 404 aa25.37■■□□□ 1.65
RTCA-201ENST00000260563 ZNRF3Q9ULT6 936 aa25.37■■□□□ 1.65
RTCA-201ENST00000260563 PDE4AP27815 886 aa25.36■■□□□ 1.65
RTCA-201ENST00000260563 RGS3P49796 1198 aa25.36■■□□□ 1.65
RTCA-201ENST00000260563 BCAMP50895 628 aa25.36■■□□□ 1.65
RTCA-201ENST00000260563 PODNQ7Z5L7 613 aa25.36■■□□□ 1.65
RTCA-201ENST00000260563 FBXO33Q7Z6M2 555 aa25.36■■□□□ 1.65
RTCA-201ENST00000260563 DBNDD2Q9BQY9 259 aa25.36■■□□□ 1.65
RTCA-201ENST00000260563 IFIT2P09913 472 aaKnown RBP25.35■■□□□ 1.65
RTCA-201ENST00000260563 TLR7Q9NYK1 1049 aaKnown RBP25.35■■□□□ 1.65
RTCA-201ENST00000260563 DBNLQ9UJU6 430 aaKnown RBP25.35■■□□□ 1.65
RTCA-201ENST00000260563 YDJCA8MPS7 323 aa25.34■■□□□ 1.65
RTCA-201ENST00000260563 FZD9O00144 591 aa25.34■■□□□ 1.65
RTCA-201ENST00000260563 EIF6P56537 245 aaKnown RBP25.34■■□□□ 1.65
RTCA-201ENST00000260563 IL1R1P14778 569 aa25.33■■□□□ 1.65
RTCA-201ENST00000260563 PHKA1P46020 1223 aa25.33■■□□□ 1.65
RTCA-201ENST00000260563 CCDC102BQ68D86 513 aa25.33■■□□□ 1.65
RTCA-201ENST00000260563 GNL3LQ9NVN8 582 aaKnown RBP25.33■■□□□ 1.65
RTCA-201ENST00000260563 AKAP11Q9UKA4 1901 aa25.33■■□□□ 1.65
RTCA-201ENST00000260563 CCDC158Q5M9N0 1113 aa25.32■■□□□ 1.64
RTCA-201ENST00000260563 FRAT2O75474 233 aaPredicted RBP25.32■■□□□ 1.64
RTCA-201ENST00000260563 C16orf71Q8IYS4 520 aaPredicted RBP25.32■■□□□ 1.64
RTCA-201ENST00000260563 ZNF541Q9H0D2 1346 aa25.31■■□□□ 1.64
RTCA-201ENST00000260563 TTC39AQ5SRH9 613 aa25.31■■□□□ 1.64
RTCA-201ENST00000260563 TDRD7Q8NHU6 1098 aaKnown RBP25.31■■□□□ 1.64
RTCA-201ENST00000260563 IQSEC3Q9UPP2 1182 aaPredicted RBP25.31■■□□□ 1.64
RTCA-201ENST00000260563 FBXW7Q969H0 707 aa25.3■■□□□ 1.64
RTCA-201ENST00000260563 COL1A1P02452 1464 aaPredicted RBP25.29■■□□□ 1.64
RTCA-201ENST00000260563 RAD17O75943 681 aa25.29■■□□□ 1.64
RTCA-201ENST00000260563 CIAPIN1Q6FI81 312 aa25.29■■□□□ 1.64
RTCA-201ENST00000260563 KCNQ5Q9NR82 932 aa25.29■■□□□ 1.64
RTCA-201ENST00000260563 SEMA3EO15041 775 aa25.28■■□□□ 1.64
RTCA-201ENST00000260563 UQCRFS1P1P0C7P4 283 aa25.28■■□□□ 1.64
RTCA-201ENST00000260563 ARID4AP29374 1257 aaPredicted RBP25.28■■□□□ 1.64
RTCA-201ENST00000260563 CXCL9Q07325 125 aa25.28■■□□□ 1.64
RTCA-201ENST00000260563 USP17L3A6NCW0 530 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms