RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 FPGT-TNNI3KV9GXZ4 949 aa21.29■■□□□ 1
SRSF1-201ENST00000258962 TAF1P21675 1872 aa21.29■■□□□ 1
SRSF1-201ENST00000258962 CCDC88AQ3V6T2 1871 aa21.29■■□□□ 1
SRSF1-201ENST00000258962 IL15P40933 162 aaPredicted RBP21.29■■□□□ 1
SRSF1-201ENST00000258962 JDP2Q8WYK2 163 aa21.29■■□□□ 1
SRSF1-201ENST00000258962 RTL9Q8NET4 1388 aa21.28■■□□□ 1
SRSF1-201ENST00000258962 SPEF2Q9C093 1822 aa21.28■■□□□ 1
SRSF1-201ENST00000258962 GLRX3O76003 335 aaKnown RBP21.28■■□□□ 1
SRSF1-201ENST00000258962 ITGA6P23229 1130 aa21.28■■□□□ 1
SRSF1-201ENST00000258962 IFIT5Q13325 482 aaKnown RBP21.28■■□□□ 1
SRSF1-201ENST00000258962 LARGE2Q8N3Y3 721 aa21.28■■□□□ 1
SRSF1-201ENST00000258962 GPATCH3Q96I76 525 aa21.28■■□□□ 1
SRSF1-201ENST00000258962 IPO9Q96P70 1041 aaKnown RBP21.28■■□□□ 1
SRSF1-201ENST00000258962 FBXO3Q9UK99 471 aa21.28■■□□□ 1
SRSF1-201ENST00000258962 IGHMBP2P38935 993 aaKnown RBP21.27■■□□□ 1
SRSF1-201ENST00000258962 RTFDC1Q9BY42 306 aaPredicted RBP21.27■■□□□ 1
SRSF1-201ENST00000258962 VPS33BQ9H267 617 aa21.27■■□□□ 1
SRSF1-201ENST00000258962 ANKIB1Q9P2G1 1089 aa21.27■■□□□ 1
SRSF1-201ENST00000258962 ZNF609O15014 1411 aa21.27■■□□□ 1
SRSF1-201ENST00000258962 SNED1Q8TER0 1413 aa21.27■■□□□ 1
SRSF1-201ENST00000258962 ANKRD18BA2A2Z9 1011 aa21.26■□□□□ 0.99
SRSF1-201ENST00000258962 TRIM6-TRIM34B2RNG4 842 aa21.26■□□□□ 0.99
SRSF1-201ENST00000258962 ERC2O15083 957 aa21.26■□□□□ 0.99
SRSF1-201ENST00000258962 PPIP5K2O43314 1243 aa21.26■□□□□ 0.99
SRSF1-201ENST00000258962 RILPL2Q969X0 211 aa21.26■□□□□ 0.99
SRSF1-201ENST00000258962 DBNLQ9UJU6 430 aaKnown RBP21.26■□□□□ 0.99
SRSF1-201ENST00000258962 GLTPD2A6NH11 291 aa21.25■□□□□ 0.99
SRSF1-201ENST00000258962 MAP4K4O95819 1239 aaPredicted RBP21.25■□□□□ 0.99
SRSF1-201ENST00000258962 MPHOSPH8Q99549 860 aa21.25■□□□□ 0.99
SRSF1-201ENST00000258962 C22orf23Q9BZE7 217 aa21.25■□□□□ 0.99
SRSF1-201ENST00000258962 GPR108Q9NPR9 543 aa21.25■□□□□ 0.99
SRSF1-201ENST00000258962 BSDC1Q9NW68 430 aaPredicted RBP21.25■□□□□ 0.99
SRSF1-201ENST00000258962 C6orf229H3BNL8 230 aa21.24■□□□□ 0.99
SRSF1-201ENST00000258962 GPSM2P81274 684 aa21.24■□□□□ 0.99
SRSF1-201ENST00000258962 AOC3Q16853 763 aa21.24■□□□□ 0.99
SRSF1-201ENST00000258962 TAF7LQ5H9L4 462 aa21.24■□□□□ 0.99
SRSF1-201ENST00000258962 CASC1Q6TDU7 716 aa21.24■□□□□ 0.99
SRSF1-201ENST00000258962 NIM1KQ8IY84 436 aa21.24■□□□□ 0.99
SRSF1-201ENST00000258962 COL4A1P02462 1669 aa21.23■□□□□ 0.99
SRSF1-201ENST00000258962 CHMLP26374 656 aa21.23■□□□□ 0.99
SRSF1-201ENST00000258962 EYA3Q99504 573 aa21.23■□□□□ 0.99
SRSF1-201ENST00000258962 DBNDD2Q9BQY9 259 aa21.23■□□□□ 0.99
SRSF1-201ENST00000258962 DICER1Q9UPY3 1922 aaKnown RBP21.23■□□□□ 0.99
SRSF1-201ENST00000258962 RBM25P49756 843 aaKnown RBP21.22■□□□□ 0.99
SRSF1-201ENST00000258962 WASHC4Q2M389 1173 aa21.22■□□□□ 0.99
SRSF1-201ENST00000258962 CNTROBQ8N137 903 aa21.22■□□□□ 0.99
SRSF1-201ENST00000258962 PODXL2Q9NZ53 605 aa21.22■□□□□ 0.99
SRSF1-201ENST00000258962 GGA1Q9UJY5 639 aa21.22■□□□□ 0.99
SRSF1-201ENST00000258962 RIPOR2Q9Y4F9 1068 aa21.22■□□□□ 0.99
SRSF1-201ENST00000258962 EIF5BO60841 1220 aaKnown RBP21.21■□□□□ 0.99
SRSF1-201ENST00000258962 EIF6P56537 245 aaKnown RBP21.21■□□□□ 0.99
SRSF1-201ENST00000258962 KIAA2012Q0VF49 1180 aa21.21■□□□□ 0.99
SRSF1-201ENST00000258962 DDRGK1Q96HY6 314 aa21.21■□□□□ 0.99
SRSF1-201ENST00000258962 NMRK2Q9NPI5 230 aa21.21■□□□□ 0.99
SRSF1-201ENST00000258962 POLLQ9UGP5 575 aa21.21■□□□□ 0.99
SRSF1-201ENST00000258962 MINPP1Q9UNW1 487 aa21.21■□□□□ 0.99
SRSF1-201ENST00000258962 XDHP47989 1333 aa21.21■□□□□ 0.99
SRSF1-201ENST00000258962 A0A1B0GUL6 1792 aa21.21■□□□□ 0.99
SRSF1-201ENST00000258962 FZD9O00144 591 aa21.2■□□□□ 0.98
SRSF1-201ENST00000258962 UFL1O94874 794 aa21.2■□□□□ 0.98
SRSF1-201ENST00000258962 TBC1D16Q8TBP0 767 aa21.2■□□□□ 0.98
SRSF1-201ENST00000258962 RRAGCQ9HB90 399 aa21.2■□□□□ 0.98
SRSF1-201ENST00000258962 CEP126Q9P2H0 1117 aa21.2■□□□□ 0.98
SRSF1-201ENST00000258962 ARAP2Q8WZ64 1704 aa21.2■□□□□ 0.98
SRSF1-201ENST00000258962 ATP5JP18859 108 aa21.19■□□□□ 0.98
SRSF1-201ENST00000258962 TIMM10P62072 90 aa21.19■□□□□ 0.98
SRSF1-201ENST00000258962 LDHAL6AQ6ZMR3 332 aa21.19■□□□□ 0.98
SRSF1-201ENST00000258962 ESYT1Q9BSJ8 1104 aa21.19■□□□□ 0.98
SRSF1-201ENST00000258962 ZC3H12CQ9C0D7 883 aaKnown RBP21.19■□□□□ 0.98
SRSF1-201ENST00000258962 TIAM2Q8IVF5 1701 aa21.19■□□□□ 0.98
SRSF1-201ENST00000258962 A0A1B0GUL7 405 aa21.19■□□□□ 0.98
SRSF1-201ENST00000258962 RIMBP2O15034 1052 aa21.19■□□□□ 0.98
SRSF1-201ENST00000258962 DDNO94850 711 aaPredicted RBP21.19■□□□□ 0.98
SRSF1-201ENST00000258962 ATP2B4P23634 1241 aa21.19■□□□□ 0.98
SRSF1-201ENST00000258962 ANKRD2Q9GZV1 360 aa21.19■□□□□ 0.98
SRSF1-201ENST00000258962 ZNRF3Q9ULT6 936 aa21.19■□□□□ 0.98
SRSF1-201ENST00000258962 LRRC37AA6NMS7 1700 aa21.18■□□□□ 0.98
SRSF1-201ENST00000258962 G3V3G9 751 aa21.18■□□□□ 0.98
SRSF1-201ENST00000258962 VEGFAP15692 232 aaPredicted RBP21.18■□□□□ 0.98
SRSF1-201ENST00000258962 DCAF8Q5TAQ9 597 aa21.18■□□□□ 0.98
SRSF1-201ENST00000258962 VGLL2Q8N8G2 317 aa21.18■□□□□ 0.98
SRSF1-201ENST00000258962 BOLA2Q9H3K6 86 aa21.18■□□□□ 0.98
SRSF1-201ENST00000258962 EVI5LQ96CN4 794 aa21.17■□□□□ 0.98
SRSF1-201ENST00000258962 NEUROD6Q96NK8 337 aa21.17■□□□□ 0.98
SRSF1-201ENST00000258962 USP26Q9BXU7 913 aa21.17■□□□□ 0.98
SRSF1-201ENST00000258962 CNNM1Q9NRU3 951 aa21.17■□□□□ 0.98
SRSF1-201ENST00000258962 ZNF541Q9H0D2 1346 aa21.17■□□□□ 0.98
SRSF1-201ENST00000258962 METTL24Q5JXM2 366 aa21.16■□□□□ 0.98
SRSF1-201ENST00000258962 IL25Q9H293 177 aa21.16■□□□□ 0.98
SRSF1-201ENST00000258962 KIF3CO14782 793 aa21.15■□□□□ 0.98
SRSF1-201ENST00000258962 GPC2Q8N158 579 aa21.15■□□□□ 0.98
SRSF1-201ENST00000258962 AKAP2Q9Y2D5 859 aa21.15■□□□□ 0.98
SRSF1-201ENST00000258962 LEMD3Q9Y2U8 911 aa21.15■□□□□ 0.98
SRSF1-201ENST00000258962 GJA3Q9Y6H8 435 aa21.15■□□□□ 0.98
SRSF1-201ENST00000258962 REC8O95072 547 aa21.14■□□□□ 0.98
SRSF1-201ENST00000258962 KCNJ4P48050 445 aa21.14■□□□□ 0.98
SRSF1-201ENST00000258962 CHRNDQ07001 517 aa21.14■□□□□ 0.98
SRSF1-201ENST00000258962 GPR101Q96P66 508 aaPredicted RBP21.14■□□□□ 0.98
SRSF1-201ENST00000258962 ADORA1P30542 326 aa21.14■□□□□ 0.97
SRSF1-201ENST00000258962 ERICH6Q7L0X2 663 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms