RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 SCNN1DP51172 638 aa23.28■■□□□ 1.32
UPK3B-201ENST00000257632 EAPPQ56P03 285 aaPredicted RBP23.28■■□□□ 1.32
UPK3B-201ENST00000257632 TXNRD3Q86VQ6 643 aa23.28■■□□□ 1.32
UPK3B-201ENST00000257632 SIL1Q9H173 461 aa23.28■■□□□ 1.32
UPK3B-201ENST00000257632 KCNQ5Q9NR82 932 aa23.28■■□□□ 1.32
UPK3B-201ENST00000257632 SCN9AQ15858 1988 aa23.28■■□□□ 1.32
UPK3B-201ENST00000257632 UBE4AQ14139 1066 aa23.27■■□□□ 1.32
UPK3B-201ENST00000257632 SMC1BQ8NDV3 1235 aa23.27■■□□□ 1.32
UPK3B-201ENST00000257632 EPS15P42566 896 aa23.26■■□□□ 1.31
UPK3B-201ENST00000257632 PNMA8AQ86V59 439 aaPredicted RBP23.26■■□□□ 1.31
UPK3B-201ENST00000257632 FBXW7Q969H0 707 aa23.26■■□□□ 1.31
UPK3B-201ENST00000257632 GPRC5DQ9NZD1 345 aa23.26■■□□□ 1.31
UPK3B-201ENST00000257632 FBXO3Q9UK99 471 aa23.26■■□□□ 1.31
UPK3B-201ENST00000257632 ZBTB12Q9Y330 459 aaPredicted RBP23.26■■□□□ 1.31
UPK3B-201ENST00000257632 PSME4Q14997 1843 aa23.25■■□□□ 1.31
UPK3B-201ENST00000257632 ZBTB7BO15156 539 aaPredicted RBP23.25■■□□□ 1.31
UPK3B-201ENST00000257632 MTX1Q13505 466 aa23.25■■□□□ 1.31
UPK3B-201ENST00000257632 C15orf52Q6ZUT6 534 aaKnown RBP23.25■■□□□ 1.31
UPK3B-201ENST00000257632 ZNF804AQ7Z570 1209 aa23.25■■□□□ 1.31
UPK3B-201ENST00000257632 C1orf115Q9H7X2 142 aa23.25■■□□□ 1.31
UPK3B-201ENST00000257632 PA2G4Q9UQ80 394 aaKnown RBP23.25■■□□□ 1.31
UPK3B-201ENST00000257632 CLEC11AQ9Y240 323 aa23.25■■□□□ 1.31
UPK3B-201ENST00000257632 USP17L3A6NCW0 530 aa23.24■■□□□ 1.31
UPK3B-201ENST00000257632 USP17L4A6NCW7 530 aa23.24■■□□□ 1.31
UPK3B-201ENST00000257632 PDE8BO95263 885 aa23.24■■□□□ 1.31
UPK3B-201ENST00000257632 RPS12P25398 132 aaKnown RBP23.24■■□□□ 1.31
UPK3B-201ENST00000257632 MVPQ14764 893 aaKnown RBP23.24■■□□□ 1.31
UPK3B-201ENST00000257632 USP17L1Q7RTZ2 530 aa23.24■■□□□ 1.31
UPK3B-201ENST00000257632 COPRSQ9NQ92 184 aa23.24■■□□□ 1.31
UPK3B-201ENST00000257632 COG6Q9Y2V7 657 aa23.24■■□□□ 1.31
UPK3B-201ENST00000257632 CIAO1O76071 339 aa23.23■■□□□ 1.31
UPK3B-201ENST00000257632 VIL1P09327 827 aaKnown RBP23.23■■□□□ 1.31
UPK3B-201ENST00000257632 LDHDQ86WU2 507 aa23.23■■□□□ 1.31
UPK3B-201ENST00000257632 CD209Q9NNX6 404 aa23.23■■□□□ 1.31
UPK3B-201ENST00000257632 ADARB2Q9NS39 739 aaKnown RBP23.23■■□□□ 1.31
UPK3B-201ENST00000257632 CNOT7Q9UIV1 285 aaKnown RBP23.23■■□□□ 1.31
UPK3B-201ENST00000257632 H7C1D1 291 aa23.22■■□□□ 1.31
UPK3B-201ENST00000257632 POTEIP0CG38 1075 aa23.22■■□□□ 1.31
UPK3B-201ENST00000257632 POTEJP0CG39 1038 aa23.22■■□□□ 1.31
UPK3B-201ENST00000257632 RSBN1LQ6PCB5 846 aaPredicted RBP23.22■■□□□ 1.31
UPK3B-201ENST00000257632 VGLL2Q8N8G2 317 aa23.22■■□□□ 1.31
UPK3B-201ENST00000257632 DPF2Q92785 391 aa23.22■■□□□ 1.31
UPK3B-201ENST00000257632 KLRG1Q96E93 195 aa23.22■■□□□ 1.31
UPK3B-201ENST00000257632 DDX19BQ9UMR2 479 aa23.22■■□□□ 1.31
UPK3B-201ENST00000257632 IRS2Q9Y4H2 1338 aa23.22■■□□□ 1.31
UPK3B-201ENST00000257632 PNMA6EA0A0J9YXQ4 647 aa23.21■■□□□ 1.31
UPK3B-201ENST00000257632 IL15P40933 162 aaPredicted RBP23.21■■□□□ 1.31
UPK3B-201ENST00000257632 PUM3Q15397 648 aaKnown RBP23.21■■□□□ 1.31
UPK3B-201ENST00000257632 CHADLQ6NUI6 762 aa23.21■■□□□ 1.31
UPK3B-201ENST00000257632 USP50Q70EL3 339 aaPredicted RBP23.21■■□□□ 1.31
UPK3B-201ENST00000257632 ATG9AQ7Z3C6 839 aa23.21■■□□□ 1.31
UPK3B-201ENST00000257632 MICALL2Q8IY33 904 aa23.21■■□□□ 1.31
UPK3B-201ENST00000257632 CEP126Q9P2H0 1117 aa23.21■■□□□ 1.31
UPK3B-201ENST00000257632 IFIT1P09914 478 aaKnown RBP23.2■■□□□ 1.3
UPK3B-201ENST00000257632 PDE3AQ14432 1141 aa23.2■■□□□ 1.3
UPK3B-201ENST00000257632 STRIP1Q5VSL9 837 aa23.2■■□□□ 1.3
UPK3B-201ENST00000257632 VPS37DQ86XT2 251 aa23.2■■□□□ 1.3
UPK3B-201ENST00000257632 AGBL3Q8NEM8 1001 aa23.2■■□□□ 1.3
UPK3B-201ENST00000257632 CHMP4BQ9H444 224 aaKnown RBP23.2■■□□□ 1.3
UPK3B-201ENST00000257632 HIBADHP31937 336 aaKnown RBP23.19■■□□□ 1.3
UPK3B-201ENST00000257632 GYG1P46976 350 aa23.19■■□□□ 1.3
UPK3B-201ENST00000257632 GTF2IP78347 998 aa23.19■■□□□ 1.3
UPK3B-201ENST00000257632 CAVIN4Q5BKX8 364 aa23.19■■□□□ 1.3
UPK3B-201ENST00000257632 TTLL5Q6EMB2 1281 aa23.19■■□□□ 1.3
UPK3B-201ENST00000257632 SLC5A1P13866 664 aa23.18■■□□□ 1.3
UPK3B-201ENST00000257632 ATP8B2P98198 1209 aa23.18■■□□□ 1.3
UPK3B-201ENST00000257632 MYO3BQ8WXR4 1341 aa23.17■■□□□ 1.3
UPK3B-201ENST00000257632 SHTN1A0MZ66 631 aa23.17■■□□□ 1.3
UPK3B-201ENST00000257632 IL1R1P14778 569 aa23.17■■□□□ 1.3
UPK3B-201ENST00000257632 G3BP1Q13283 466 aaKnown RBP eCLIP23.17■■□□□ 1.3
UPK3B-201ENST00000257632 DACT2Q5SW24 774 aa23.17■■□□□ 1.3
UPK3B-201ENST00000257632 C20orf194Q5TEA3 1177 aa23.17■■□□□ 1.3
UPK3B-201ENST00000257632 LPIN2Q92539 896 aa23.17■■□□□ 1.3
UPK3B-201ENST00000257632 FAM84BQ96KN1 310 aaPredicted RBP23.17■■□□□ 1.3
UPK3B-201ENST00000257632 FGFR2P21802 821 aa23.16■■□□□ 1.3
UPK3B-201ENST00000257632 ATP2B3Q16720 1220 aa23.16■■□□□ 1.3
UPK3B-201ENST00000257632 ADAMTSL1Q8N6G6 1762 aa23.16■■□□□ 1.3
UPK3B-201ENST00000257632 ZNF609O15014 1411 aa23.16■■□□□ 1.3
UPK3B-201ENST00000257632 FRAT2O75474 233 aaPredicted RBP23.15■■□□□ 1.3
UPK3B-201ENST00000257632 POLA2Q14181 598 aa23.15■■□□□ 1.3
UPK3B-201ENST00000257632 TBC1D10BQ4KMP7 808 aaPredicted RBP23.15■■□□□ 1.3
UPK3B-201ENST00000257632 RBM26Q5T8P6 1007 aaKnown RBP23.15■■□□□ 1.3
UPK3B-201ENST00000257632 SAMD7Q7Z3H4 446 aa23.15■■□□□ 1.3
UPK3B-201ENST00000257632 TRPM4Q8TD43 1214 aa23.15■■□□□ 1.3
UPK3B-201ENST00000257632 MXD3Q9BW11 206 aa23.15■■□□□ 1.3
UPK3B-201ENST00000257632 USP17L8P0C7I0 530 aa23.14■■□□□ 1.29
UPK3B-201ENST00000257632 OS9Q13438 667 aaPredicted RBP23.14■■□□□ 1.29
UPK3B-201ENST00000257632 CEP85Q6P2H3 762 aa23.14■■□□□ 1.29
UPK3B-201ENST00000257632 SSH3Q8TE77 659 aa23.14■■□□□ 1.29
UPK3B-201ENST00000257632 ZNF646O15015 1829 aaPredicted RBP23.14■■□□□ 1.29
UPK3B-201ENST00000257632 RRP1P56182 461 aaKnown RBP23.13■■□□□ 1.29
UPK3B-201ENST00000257632 MAP1SQ66K74 1059 aaPredicted RBP23.13■■□□□ 1.29
UPK3B-201ENST00000257632 FBXO33Q7Z6M2 555 aa23.13■■□□□ 1.29
UPK3B-201ENST00000257632 OGFOD1Q8N543 542 aa23.13■■□□□ 1.29
UPK3B-201ENST00000257632 JMYQ8N9B5 988 aa23.13■■□□□ 1.29
UPK3B-201ENST00000257632 TDRD7Q8NHU6 1098 aaKnown RBP23.13■■□□□ 1.29
UPK3B-201ENST00000257632 GMLQ99445 158 aa23.13■■□□□ 1.29
UPK3B-201ENST00000257632 JAG2Q9Y219 1238 aa23.13■■□□□ 1.29
UPK3B-201ENST00000257632 SURF6O75683 361 aaKnown RBP23.12■■□□□ 1.29
UPK3B-201ENST00000257632 SASH1O94885 1247 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms