RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 TUBB2AQ13885 445 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 PAF1Q8N7H5 531 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 TUBB2BQ9BVA1 445 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 ERCC6Q03468 1493 aa11.6□□□□□ -0.55
TRPM1-201ENST00000256552 A0A1B0GVL5 298 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 FRMD3A2A2Y4 597 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 GOLGA6BA6NDN3 693 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 DTNBO60941 627 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 VAV2P52735 878 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 LARP1Q6PKG0 1096 aaKnown RBP11.59□□□□□ -0.55
TRPM1-201ENST00000256552 Q6ZUG5 572 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 PIK3C2GO75747 1445 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 PTPRGP23470 1445 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 AKR1B15C9JRZ8 316 aaPredicted RBP11.59□□□□□ -0.55
TRPM1-201ENST00000256552 KRT86O43790 486 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 PNMA6AP0CW24 399 aaPredicted RBP11.59□□□□□ -0.55
TRPM1-201ENST00000256552 CCDC38Q502W7 563 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 LMNTD2Q8IXW0 634 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 ATAD2Q6PL18 1390 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 TACC1O75410 805 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 TRIM21P19474 475 aaKnown RBP11.59□□□□□ -0.55
TRPM1-201ENST00000256552 HPDP32754 393 aaPredicted RBP11.59□□□□□ -0.55
TRPM1-201ENST00000256552 FLIIQ13045 1269 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 RUFY3Q7L099 469 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 AKR1B10O60218 316 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 CLCN6P51797 869 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 SELENOSQ9BQE4 189 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 CARD10Q9BWT7 1032 aa11.59□□□□□ -0.55
TRPM1-201ENST00000256552 POLR3AO14802 1390 aaPredicted RBP11.59□□□□□ -0.55
TRPM1-201ENST00000256552 ARHGAP6O43182 974 aa11.58□□□□□ -0.55
TRPM1-201ENST00000256552 PSMD2Q13200 908 aa11.58□□□□□ -0.55
TRPM1-201ENST00000256552 SNCBQ16143 134 aa11.58□□□□□ -0.55
TRPM1-201ENST00000256552 NUTM2GQ5VZR2 741 aa11.58□□□□□ -0.55
TRPM1-201ENST00000256552 TMED8Q6PL24 325 aaPredicted RBP11.58□□□□□ -0.55
TRPM1-201ENST00000256552 LEO1Q8WVC0 666 aaPredicted RBP11.58□□□□□ -0.55
TRPM1-201ENST00000256552 SCAF11Q99590 1463 aaKnown RBP11.58□□□□□ -0.56
TRPM1-201ENST00000256552 FAM83GA6ND36 823 aa11.58□□□□□ -0.56
TRPM1-201ENST00000256552 KRT83P78385 493 aa11.58□□□□□ -0.56
TRPM1-201ENST00000256552 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.58□□□□□ -0.56
TRPM1-201ENST00000256552 RPGRIP1LQ68CZ1 1315 aa11.58□□□□□ -0.56
TRPM1-201ENST00000256552 EPRSP07814 1512 aaKnown RBP11.58□□□□□ -0.56
TRPM1-201ENST00000256552 TRAF1Q13077 416 aa11.58□□□□□ -0.56
TRPM1-201ENST00000256552 TAF7Q15545 349 aaPredicted RBP11.58□□□□□ -0.56
TRPM1-201ENST00000256552 CCDC82Q8N4S0 544 aa11.58□□□□□ -0.56
TRPM1-201ENST00000256552 TROQ12816 1431 aaPredicted RBP11.58□□□□□ -0.56
TRPM1-201ENST00000256552 CHUKO15111 745 aa11.58□□□□□ -0.56
TRPM1-201ENST00000256552 MYO1BO43795 1136 aa11.58□□□□□ -0.56
TRPM1-201ENST00000256552 ETF1P62495 437 aaKnown RBP11.58□□□□□ -0.56
TRPM1-201ENST00000256552 EGFL6Q8IUX8 553 aa11.58□□□□□ -0.56
TRPM1-201ENST00000256552 TEX11Q8IYF3 940 aa11.58□□□□□ -0.56
TRPM1-201ENST00000256552 AFMP43652 599 aa11.58□□□□□ -0.56
TRPM1-201ENST00000256552 LACTBP83111 547 aaPredicted RBP11.58□□□□□ -0.56
TRPM1-201ENST00000256552 NACAP1Q9BZK3 213 aa11.58□□□□□ -0.56
TRPM1-201ENST00000256552 INSRP06213 1382 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 GDAP1L1Q96MZ0 367 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 SAMD15Q9P1V8 674 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 NSFL1CQ9UNZ2 370 aaKnown RBP11.57□□□□□ -0.56
TRPM1-201ENST00000256552 LUC7L2Q9Y383 392 aaKnown RBP11.57□□□□□ -0.56
TRPM1-201ENST00000256552 MRFAP1Q9Y605 127 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 GNGT1P63211 74 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 SSRP1Q08945 709 aaKnown RBP11.57□□□□□ -0.56
TRPM1-201ENST00000256552 KMT5BQ4FZB7 885 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 RRAGBQ5VZM2 374 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 XPO4Q9C0E2 1151 aaKnown RBP11.57□□□□□ -0.56
TRPM1-201ENST00000256552 GSTTP1A0A1W2PQM5 241 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 PCK1P35558 622 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 KIF5AQ12840 1032 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 ARMCX6Q7L4S7 300 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 PHAXQ9H814 394 aaKnown RBP11.57□□□□□ -0.56
TRPM1-201ENST00000256552 RWDD2BP57060 319 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 PNMA8AQ86V59 439 aaPredicted RBP11.57□□□□□ -0.56
TRPM1-201ENST00000256552 CCDC155Q8N6L0 562 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 C8orf58Q8NAV2 365 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 FAM71BQ8TC56 605 aa11.57□□□□□ -0.56
TRPM1-201ENST00000256552 ARHGAP5Q13017 1502 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 FERP16591 822 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 CCT5P48643 541 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 PRPF4BQ13523 1007 aaKnown RBP11.56□□□□□ -0.56
TRPM1-201ENST00000256552 IQCA1Q86XH1 822 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 BCAS4Q8TDM0 211 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 PLEKHA4Q9H4M7 779 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 BAIAP2L1Q9UHR4 511 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 CTIFO43310 598 aaKnown RBP11.56□□□□□ -0.56
TRPM1-201ENST00000256552 PPP1R12BO60237 982 aaPredicted RBP11.56□□□□□ -0.56
TRPM1-201ENST00000256552 NOP2P46087 812 aaKnown RBP11.56□□□□□ -0.56
TRPM1-201ENST00000256552 CREB3L3Q68CJ9 461 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 GOLGA8AA7E2F4 631 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 POTEJP0CG39 1038 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 ELF1P32519 619 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 STX17P56962 302 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 SH2D4BQ5SQS7 431 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 CACTINQ8WUQ7 758 aaKnown RBP11.56□□□□□ -0.56
TRPM1-201ENST00000256552 VAMP4O75379 141 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 SPAG1Q07617 926 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 PPFIA1Q13136 1202 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 CCDC122Q5T0U0 273 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 CNGA4Q8IV77 575 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 CCDC144CPQ8IYA2 1237 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 TSPYL6Q8N831 410 aa11.56□□□□□ -0.56
TRPM1-201ENST00000256552 TESK2Q96S53 571 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms