RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 USP17L3A6NCW0 530 aa22.45■■□□□ 1.18
SNRPA1-201ENST00000254193 USP17L4A6NCW7 530 aa22.45■■□□□ 1.18
SNRPA1-201ENST00000254193 PTPN12Q05209 780 aaKnown RBP22.45■■□□□ 1.18
SNRPA1-201ENST00000254193 METTL24Q5JXM2 366 aa22.45■■□□□ 1.18
SNRPA1-201ENST00000254193 USP17L1Q7RTZ2 530 aa22.45■■□□□ 1.18
SNRPA1-201ENST00000254193 DPF2Q92785 391 aa22.45■■□□□ 1.18
SNRPA1-201ENST00000254193 YTHDC1Q96MU7 727 aaKnown RBP22.45■■□□□ 1.18
SNRPA1-201ENST00000254193 ADARB2Q9NS39 739 aaKnown RBP22.45■■□□□ 1.18
SNRPA1-201ENST00000254193 MROH5Q6ZUA9 1318 aa22.45■■□□□ 1.18
SNRPA1-201ENST00000254193 RPS12P25398 132 aaKnown RBP22.44■■□□□ 1.18
SNRPA1-201ENST00000254193 MAP1SQ66K74 1059 aaPredicted RBP22.44■■□□□ 1.18
SNRPA1-201ENST00000254193 C15orf52Q6ZUT6 534 aaKnown RBP22.44■■□□□ 1.18
SNRPA1-201ENST00000254193 USP50Q70EL3 339 aaPredicted RBP22.44■■□□□ 1.18
SNRPA1-201ENST00000254193 ITPRIPQ8IWB1 547 aa22.44■■□□□ 1.18
SNRPA1-201ENST00000254193 H7C1D1 291 aa22.43■■□□□ 1.18
SNRPA1-201ENST00000254193 EYA2O00167 538 aa22.43■■□□□ 1.18
SNRPA1-201ENST00000254193 GNAI2P04899 355 aa22.43■■□□□ 1.18
SNRPA1-201ENST00000254193 UBE4AQ14139 1066 aa22.43■■□□□ 1.18
SNRPA1-201ENST00000254193 RSBN1LQ6PCB5 846 aaPredicted RBP22.43■■□□□ 1.18
SNRPA1-201ENST00000254193 PANK1Q8TE04 598 aa22.43■■□□□ 1.18
SNRPA1-201ENST00000254193 FBXW7Q969H0 707 aa22.43■■□□□ 1.18
SNRPA1-201ENST00000254193 CD209Q9NNX6 404 aa22.43■■□□□ 1.18
SNRPA1-201ENST00000254193 SPEF2Q9C093 1822 aa22.43■■□□□ 1.18
SNRPA1-201ENST00000254193 TRPM4Q8TD43 1214 aa22.42■■□□□ 1.18
SNRPA1-201ENST00000254193 MXD3Q9BW11 206 aa22.42■■□□□ 1.18
SNRPA1-201ENST00000254193 SIL1Q9H173 461 aa22.42■■□□□ 1.18
SNRPA1-201ENST00000254193 PA2G4Q9UQ80 394 aaKnown RBP22.42■■□□□ 1.18
SNRPA1-201ENST00000254193 APLP1P51693 650 aa22.41■■□□□ 1.18
SNRPA1-201ENST00000254193 HIRAP54198 1017 aaPredicted RBP22.41■■□□□ 1.18
SNRPA1-201ENST00000254193 SAMD7Q7Z3H4 446 aa22.41■■□□□ 1.18
SNRPA1-201ENST00000254193 ZNF804AQ7Z570 1209 aa22.41■■□□□ 1.18
SNRPA1-201ENST00000254193 VGLL2Q8N8G2 317 aa22.41■■□□□ 1.18
SNRPA1-201ENST00000254193 SCN4AP35499 1836 aa22.41■■□□□ 1.18
SNRPA1-201ENST00000254193 SRGAP3O43295 1099 aa22.4■■□□□ 1.18
SNRPA1-201ENST00000254193 PDE8BO95263 885 aa22.4■■□□□ 1.18
SNRPA1-201ENST00000254193 HTRA3P83110 453 aa22.4■■□□□ 1.18
SNRPA1-201ENST00000254193 DACT2Q5SW24 774 aa22.4■■□□□ 1.18
SNRPA1-201ENST00000254193 ATG9AQ7Z3C6 839 aa22.4■■□□□ 1.18
SNRPA1-201ENST00000254193 CNTROBQ8N137 903 aa22.4■■□□□ 1.18
SNRPA1-201ENST00000254193 AGBL3Q8NEM8 1001 aa22.4■■□□□ 1.18
SNRPA1-201ENST00000254193 GMLQ99445 158 aa22.4■■□□□ 1.18
SNRPA1-201ENST00000254193 ITGBL1O95965 494 aaPredicted RBP22.39■■□□□ 1.17
SNRPA1-201ENST00000254193 EGFRP00533 1210 aa22.39■■□□□ 1.17
SNRPA1-201ENST00000254193 GYG1P46976 350 aa22.39■■□□□ 1.17
SNRPA1-201ENST00000254193 GTF2IP78347 998 aa22.39■■□□□ 1.17
SNRPA1-201ENST00000254193 MTX1Q13505 466 aa22.39■■□□□ 1.17
SNRPA1-201ENST00000254193 TBC1D10BQ4KMP7 808 aaPredicted RBP22.39■■□□□ 1.17
SNRPA1-201ENST00000254193 RBM26Q5T8P6 1007 aaKnown RBP22.39■■□□□ 1.17
SNRPA1-201ENST00000254193 STRIP1Q5VSL9 837 aa22.39■■□□□ 1.17
SNRPA1-201ENST00000254193 TTLL5Q6EMB2 1281 aa22.39■■□□□ 1.17
SNRPA1-201ENST00000254193 ZBTB7BO15156 539 aaPredicted RBP22.38■■□□□ 1.17
SNRPA1-201ENST00000254193 FAM84BQ96KN1 310 aaPredicted RBP22.38■■□□□ 1.17
SNRPA1-201ENST00000254193 C1orf115Q9H7X2 142 aa22.38■■□□□ 1.17
SNRPA1-201ENST00000254193 COPRSQ9NQ92 184 aa22.38■■□□□ 1.17
SNRPA1-201ENST00000254193 CIAO1O76071 339 aa22.37■■□□□ 1.17
SNRPA1-201ENST00000254193 USP17L8P0C7I0 530 aa22.37■■□□□ 1.17
SNRPA1-201ENST00000254193 IL1R1P14778 569 aa22.37■■□□□ 1.17
SNRPA1-201ENST00000254193 HIBADHP31937 336 aaKnown RBP22.37■■□□□ 1.17
SNRPA1-201ENST00000254193 FBXO3Q9UK99 471 aa22.37■■□□□ 1.17
SNRPA1-201ENST00000254193 ZNF280AP59817 542 aaPredicted RBP22.36■■□□□ 1.17
SNRPA1-201ENST00000254193 PUM3Q15397 648 aaKnown RBP22.36■■□□□ 1.17
SNRPA1-201ENST00000254193 JAG2Q9Y219 1238 aa22.36■■□□□ 1.17
SNRPA1-201ENST00000254193 PASKQ96RG2 1323 aa22.35■■□□□ 1.17
SNRPA1-201ENST00000254193 PNMA6EA0A0J9YXQ4 647 aa22.35■■□□□ 1.17
SNRPA1-201ENST00000254193 MS4A1P11836 297 aa22.35■■□□□ 1.17
SNRPA1-201ENST00000254193 FGFR2P21802 821 aa22.35■■□□□ 1.17
SNRPA1-201ENST00000254193 IL15P40933 162 aaPredicted RBP22.35■■□□□ 1.17
SNRPA1-201ENST00000254193 FBXO33Q7Z6M2 555 aa22.35■■□□□ 1.17
SNRPA1-201ENST00000254193 CEP126Q9P2H0 1117 aa22.35■■□□□ 1.17
SNRPA1-201ENST00000254193 SCN9AQ15858 1988 aa22.35■■□□□ 1.17
SNRPA1-201ENST00000254193 ZNF609O15014 1411 aa22.34■■□□□ 1.17
SNRPA1-201ENST00000254193 KIF4BQ2VIQ3 1234 aa22.34■■□□□ 1.17
SNRPA1-201ENST00000254193 TDRD7Q8NHU6 1098 aaKnown RBP22.34■■□□□ 1.17
SNRPA1-201ENST00000254193 ZC3H15Q8WU90 426 aaKnown RBP22.34■■□□□ 1.17
SNRPA1-201ENST00000254193 PGAP2Q9UHJ9 254 aa22.34■■□□□ 1.17
SNRPA1-201ENST00000254193 IFIT1P09914 478 aaKnown RBP22.33■■□□□ 1.17
SNRPA1-201ENST00000254193 BCAMP50895 628 aa22.33■■□□□ 1.17
SNRPA1-201ENST00000254193 FMR1Q06787 632 aaKnown RBP eCLIP22.33■■□□□ 1.17
SNRPA1-201ENST00000254193 VPS37DQ86XT2 251 aa22.33■■□□□ 1.17
SNRPA1-201ENST00000254193 KIAA0825Q8IV33 1275 aa22.33■■□□□ 1.17
SNRPA1-201ENST00000254193 CERS5Q8N5B7 392 aa22.33■■□□□ 1.17
SNRPA1-201ENST00000254193 ADAMTSL1Q8N6G6 1762 aa22.33■■□□□ 1.16
SNRPA1-201ENST00000254193 MYO3BQ8WXR4 1341 aa22.32■■□□□ 1.16
SNRPA1-201ENST00000254193 TRAF5O00463 557 aa22.32■■□□□ 1.16
SNRPA1-201ENST00000254193 SASH1O94885 1247 aa22.32■■□□□ 1.16
SNRPA1-201ENST00000254193 CAVIN4Q5BKX8 364 aa22.32■■□□□ 1.16
SNRPA1-201ENST00000254193 LPIN2Q92539 896 aa22.32■■□□□ 1.16
SNRPA1-201ENST00000254193 GLIS2Q9BZE0 524 aaPredicted RBP22.32■■□□□ 1.16
SNRPA1-201ENST00000254193 MYOZ2Q9NPC6 264 aa22.32■■□□□ 1.16
SNRPA1-201ENST00000254193 IQSEC3Q9UPP2 1182 aaPredicted RBP22.32■■□□□ 1.16
SNRPA1-201ENST00000254193 COG6Q9Y2V7 657 aa22.32■■□□□ 1.16
SNRPA1-201ENST00000254193 SLC5A1P13866 664 aa22.31■■□□□ 1.16
SNRPA1-201ENST00000254193 ATP8B2P98198 1209 aa22.31■■□□□ 1.16
SNRPA1-201ENST00000254193 OGFOD1Q8N543 542 aa22.31■■□□□ 1.16
SNRPA1-201ENST00000254193 ASTN2O75129 1339 aaPredicted RBP22.31■■□□□ 1.16
SNRPA1-201ENST00000254193 POLA2Q14181 598 aa22.3■■□□□ 1.16
SNRPA1-201ENST00000254193 MVPQ14764 893 aaKnown RBP22.3■■□□□ 1.16
SNRPA1-201ENST00000254193 ATP2B3Q16720 1220 aa22.3■■□□□ 1.16
SNRPA1-201ENST00000254193 C20orf194Q5TEA3 1177 aa22.3■■□□□ 1.16
SNRPA1-201ENST00000254193 DNAJC5GQ8N7S2 189 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms