RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 BTBD11A6QL63 1104 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 TCERG1O14776 1098 aaKnown RBP4.48□□□□□ -1.69
UFM1-201ENST00000239878 LMOD1P29536 600 aaPredicted RBP4.48□□□□□ -1.69
UFM1-201ENST00000239878 CRKLP46109 303 aaKnown RBP4.48□□□□□ -1.69
UFM1-201ENST00000239878 SLC39A6Q13433 755 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 SKAP1Q86WV1 359 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 SPACA7Q96KW9 195 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 FMNL2Q96PY5 1086 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 CCDC94Q9BW85 323 aaPredicted RBP4.48□□□□□ -1.69
UFM1-201ENST00000239878 CUEDC1Q9NWM3 386 aaPredicted RBP4.48□□□□□ -1.69
UFM1-201ENST00000239878 CCNL1Q9UK58 526 aaPredicted RBP4.48□□□□□ -1.69
UFM1-201ENST00000239878 ANKRD33BA6NCL7 494 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 RPS6KA4O75676 772 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 HMGB2P26583 209 aaKnown RBP4.48□□□□□ -1.69
UFM1-201ENST00000239878 NPDC1Q9NQX5 325 aaPredicted RBP4.48□□□□□ -1.69
UFM1-201ENST00000239878 TFIP11Q9UBB9 837 aaKnown RBP4.48□□□□□ -1.69
UFM1-201ENST00000239878 RRP7AQ9Y3A4 280 aaKnown RBP4.48□□□□□ -1.69
UFM1-201ENST00000239878 MAFBQ9Y5Q3 323 aaPredicted RBP4.48□□□□□ -1.69
UFM1-201ENST00000239878 GRXCR2A6NFK2 248 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 TTLL13PA6NNM8 815 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 CAMTA2O94983 1202 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 SNRPA1P09661 255 aaKnown RBP4.48□□□□□ -1.69
UFM1-201ENST00000239878 DSG2Q14126 1118 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 TUSC1Q2TAM9 212 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 TMEM164Q5U3C3 297 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 DNAJC10Q8IXB1 793 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 VTI1AQ96AJ9 217 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 TINF2Q9BSI4 451 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 TEX13AQ9BXU3 409 aaPredicted RBP4.48□□□□□ -1.69
UFM1-201ENST00000239878 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.48□□□□□ -1.69
UFM1-201ENST00000239878 ADCY9O60503 1353 aa4.48□□□□□ -1.69
UFM1-201ENST00000239878 MAFGO15525 162 aa4.47□□□□□ -1.69
UFM1-201ENST00000239878 OFD1O75665 1012 aa4.47□□□□□ -1.69
UFM1-201ENST00000239878 MAP4K4O95819 1239 aaPredicted RBP4.47□□□□□ -1.69
UFM1-201ENST00000239878 TM4SF1P30408 202 aa4.47□□□□□ -1.69
UFM1-201ENST00000239878 IL6STP40189 918 aaPredicted RBP4.47□□□□□ -1.69
UFM1-201ENST00000239878 GNAI1P63096 354 aa4.47□□□□□ -1.69
UFM1-201ENST00000239878 CBX1P83916 185 aa4.47□□□□□ -1.69
UFM1-201ENST00000239878 HDLBPQ00341 1268 aaKnown RBP4.47□□□□□ -1.69
UFM1-201ENST00000239878 COL23A1Q86Y22 540 aaPredicted RBP4.47□□□□□ -1.69
UFM1-201ENST00000239878 C8orf58Q8NAV2 365 aa4.47□□□□□ -1.69
UFM1-201ENST00000239878 STK32AQ8WU08 396 aa4.47□□□□□ -1.69
UFM1-201ENST00000239878 ZNF622Q969S3 477 aaKnown RBP eCLIP4.47□□□□□ -1.69
UFM1-201ENST00000239878 PIF1Q9H611 641 aa4.47□□□□□ -1.69
UFM1-201ENST00000239878 CCDC87Q9NVE4 849 aa4.47□□□□□ -1.69
UFM1-201ENST00000239878 VAMP4O75379 141 aa4.47□□□□□ -1.69
UFM1-201ENST00000239878 CT47B1P0C2W7 299 aaPredicted RBP4.47□□□□□ -1.69
UFM1-201ENST00000239878 PDGFDQ9GZP0 370 aaPredicted RBP4.47□□□□□ -1.69
UFM1-201ENST00000239878 MYH16Q9H6N6 1097 aa4.47□□□□□ -1.69
UFM1-201ENST00000239878 PPP1R1BQ9UD71 204 aaPredicted RBP4.47□□□□□ -1.69
UFM1-201ENST00000239878 R3HCC1Q9Y3T6 440 aaKnown RBP4.47□□□□□ -1.69
UFM1-201ENST00000239878 USP16Q9Y5T5 823 aa4.47□□□□□ -1.69
UFM1-201ENST00000239878 UQCRHLA0A096LP55 91 aa4.46□□□□□ -1.69
UFM1-201ENST00000239878 KLRG2A4D1S0 409 aaPredicted RBP4.46□□□□□ -1.69
UFM1-201ENST00000239878 UQCRHP07919 91 aa4.46□□□□□ -1.69
UFM1-201ENST00000239878 SLC20A2Q08357 652 aa4.46□□□□□ -1.69
UFM1-201ENST00000239878 KRT24Q2M2I5 525 aa4.46□□□□□ -1.69
UFM1-201ENST00000239878 TSPYL6Q8N831 410 aa4.46□□□□□ -1.69
UFM1-201ENST00000239878 SLC16A10Q8TF71 515 aa4.46□□□□□ -1.69
UFM1-201ENST00000239878 PIK3R5Q8WYR1 880 aa4.46□□□□□ -1.69
UFM1-201ENST00000239878 ZBTB1Q9Y2K1 713 aa4.46□□□□□ -1.69
UFM1-201ENST00000239878 RNF123Q5XPI4 1314 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 POTEB3A0JP26 581 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 ERVV-1B6SEH8 477 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 GYS1P13807 737 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 ATP6V1AP38606 617 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 FOSBP53539 338 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 TEFQ10587 303 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 MRPL58Q14197 206 aaKnown RBP4.46□□□□□ -1.7
UFM1-201ENST00000239878 PROSER3Q2NL68 480 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 TAF3Q5VWG9 929 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 POTEBQ6S5H4 581 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 MPNDQ8N594 471 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 RTF1Q92541 710 aaKnown RBP4.46□□□□□ -1.7
UFM1-201ENST00000239878 KCNB2Q92953 911 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 TRPC6Q9Y210 931 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 DUOX1Q9NRD9 1551 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 PTMAP06454 111 aaKnown RBP4.46□□□□□ -1.7
UFM1-201ENST00000239878 KCNJ4P48050 445 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 TERF1P54274 439 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 MARSP56192 900 aaKnown RBP4.46□□□□□ -1.7
UFM1-201ENST00000239878 KCNQ4P56696 695 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 FLAD1Q8NFF5 587 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 PRR7Q8TB68 274 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 MIS18AQ9NYP9 233 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 NARFQ9UHQ1 456 aa4.46□□□□□ -1.7
UFM1-201ENST00000239878 ARAP2Q8WZ64 1704 aa4.45□□□□□ -1.7
UFM1-201ENST00000239878 A0A0G2JS52 829 aa4.45□□□□□ -1.7
UFM1-201ENST00000239878 ATP2B3Q16720 1220 aa4.45□□□□□ -1.7
UFM1-201ENST00000239878 METTL16Q86W50 562 aaKnown RBP4.45□□□□□ -1.7
UFM1-201ENST00000239878 DDX21Q9NR30 783 aaKnown RBP eCLIP4.45□□□□□ -1.7
UFM1-201ENST00000239878 TSPYL4Q9UJ04 414 aa4.45□□□□□ -1.7
UFM1-201ENST00000239878 UTYO14607 1347 aa4.45□□□□□ -1.7
UFM1-201ENST00000239878 MYH3P11055 1940 aa4.45□□□□□ -1.7
UFM1-201ENST00000239878 POLRMTO00411 1230 aaKnown RBP4.45□□□□□ -1.7
UFM1-201ENST00000239878 DDR1Q08345 913 aa4.45□□□□□ -1.7
UFM1-201ENST00000239878 SDE2Q6IQ49 451 aa4.45□□□□□ -1.7
UFM1-201ENST00000239878 CLEC4GQ6UXB4 293 aa4.45□□□□□ -1.7
UFM1-201ENST00000239878 MTERF4Q7Z6M4 381 aaKnown RBP4.45□□□□□ -1.7
UFM1-201ENST00000239878 EGFL6Q8IUX8 553 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms