RNA–Protein interactions for RNA: ENST00000238682.7

TGFB3-201, Transcript of transforming growth factor beta 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB3, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-201ENST00000238682 GPC2Q8N158 579 aa11.46□□□□□ -0.58
TGFB3-201ENST00000238682 SSH3Q8TE77 659 aa11.46□□□□□ -0.58
TGFB3-201ENST00000238682 KLRG1Q96E93 195 aa11.46□□□□□ -0.58
TGFB3-201ENST00000238682 MEIS3Q99687 375 aa11.46□□□□□ -0.58
TGFB3-201ENST00000238682 ATP6V0A2Q9Y487 856 aa11.46□□□□□ -0.58
TGFB3-201ENST00000238682 SH3TC1Q8TE82 1336 aa11.45□□□□□ -0.58
TGFB3-201ENST00000238682 MMP14P50281 582 aa11.45□□□□□ -0.58
TGFB3-201ENST00000238682 EIF6P56537 245 aaKnown RBP11.45□□□□□ -0.58
TGFB3-201ENST00000238682 SKAP1Q86WV1 359 aa11.45□□□□□ -0.58
TGFB3-201ENST00000238682 SP8Q8IXZ3 490 aa11.45□□□□□ -0.58
TGFB3-201ENST00000238682 JDP2Q8WYK2 163 aa11.45□□□□□ -0.58
TGFB3-201ENST00000238682 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
TGFB3-201ENST00000238682 NAP1L2Q9ULW6 460 aaPredicted RBP11.45□□□□□ -0.58
TGFB3-201ENST00000238682 UBN2Q6ZU65 1347 aa11.45□□□□□ -0.58
TGFB3-201ENST00000238682 ERC1Q8IUD2 1116 aa11.45□□□□□ -0.58
TGFB3-201ENST00000238682 MYH3P11055 1940 aa11.44□□□□□ -0.58
TGFB3-201ENST00000238682 SUSD4Q5VX71 490 aa11.44□□□□□ -0.58
TGFB3-201ENST00000238682 SYNE4Q8N205 404 aa11.44□□□□□ -0.58
TGFB3-201ENST00000238682 POM121Q96HA1 1249 aa11.44□□□□□ -0.58
TGFB3-201ENST00000238682 DCTPP1Q9H773 170 aa11.44□□□□□ -0.58
TGFB3-201ENST00000238682 HACL1Q9UJ83 578 aa11.44□□□□□ -0.58
TGFB3-201ENST00000238682 SF3B3Q15393 1217 aaKnown RBP11.44□□□□□ -0.58
TGFB3-201ENST00000238682 ZBTB3Q9H5J0 574 aa11.44□□□□□ -0.58
TGFB3-201ENST00000238682 CREBZFQ9NS37 354 aa11.44□□□□□ -0.58
TGFB3-201ENST00000238682 PCDHB15Q9Y5E8 787 aa11.44□□□□□ -0.58
TGFB3-201ENST00000238682 PRELPP51888 382 aa11.43□□□□□ -0.58
TGFB3-201ENST00000238682 GRAPQ13588 217 aa11.43□□□□□ -0.58
TGFB3-201ENST00000238682 DDX46Q7L014 1031 aaKnown RBP11.43□□□□□ -0.58
TGFB3-201ENST00000238682 GRAPLQ8TC17 118 aaPredicted RBP11.43□□□□□ -0.58
TGFB3-201ENST00000238682 PDE8AO60658 829 aa11.42□□□□□ -0.58
TGFB3-201ENST00000238682 CSF1RP07333 972 aa11.42□□□□□ -0.58
TGFB3-201ENST00000238682 LMOD1P29536 600 aaPredicted RBP11.42□□□□□ -0.58
TGFB3-201ENST00000238682 USP50Q70EL3 339 aaPredicted RBP11.42□□□□□ -0.58
TGFB3-201ENST00000238682 NIM1KQ8IY84 436 aa11.42□□□□□ -0.58
TGFB3-201ENST00000238682 DNAJC5GQ8N7S2 189 aa11.42□□□□□ -0.58
TGFB3-201ENST00000238682 LRRFIP2Q9Y608 721 aaKnown RBP11.42□□□□□ -0.58
TGFB3-201ENST00000238682 CWF19L2Q2TBE0 894 aaKnown RBP11.42□□□□□ -0.58
TGFB3-201ENST00000238682 TESPA1A2RU30 521 aaPredicted RBP11.41□□□□□ -0.58
TGFB3-201ENST00000238682 CIAO1O76071 339 aa11.41□□□□□ -0.58
TGFB3-201ENST00000238682 EYA3Q99504 573 aa11.41□□□□□ -0.58
TGFB3-201ENST00000238682 TAF1DQ9H5J8 278 aaPredicted RBP11.41□□□□□ -0.58
TGFB3-201ENST00000238682 COPRSQ9NQ92 184 aa11.41□□□□□ -0.58
TGFB3-201ENST00000238682 WWC3Q9ULE0 1092 aa11.41□□□□□ -0.58
TGFB3-201ENST00000238682 STK25O00506 426 aa11.41□□□□□ -0.58
TGFB3-201ENST00000238682 NBPF7P0C2Y1 421 aaPredicted RBP11.41□□□□□ -0.58
TGFB3-201ENST00000238682 TNIP1Q15025 636 aa11.41□□□□□ -0.58
TGFB3-201ENST00000238682 TEX2Q8IWB9 1127 aa11.41□□□□□ -0.58
TGFB3-201ENST00000238682 THSD7BQ9C0I4 1608 aa11.41□□□□□ -0.58
TGFB3-201ENST00000238682 SUCLG2Q96I99 432 aa11.4□□□□□ -0.58
TGFB3-201ENST00000238682 PRDM10Q9NQV6 1147 aa11.4□□□□□ -0.58
TGFB3-201ENST00000238682 PASKQ96RG2 1323 aa11.4□□□□□ -0.58
TGFB3-201ENST00000238682 RPS12P25398 132 aaKnown RBP11.4□□□□□ -0.59
TGFB3-201ENST00000238682 FOXO4P98177 505 aa11.4□□□□□ -0.59
TGFB3-201ENST00000238682 ZBTB47Q9UFB7 747 aaPredicted RBP11.4□□□□□ -0.59
TGFB3-201ENST00000238682 CACNA1SQ13698 1873 aa11.4□□□□□ -0.59
TGFB3-201ENST00000238682 AOX1Q06278 1338 aa11.39□□□□□ -0.59
TGFB3-201ENST00000238682 POTECB2RU33 542 aa11.39□□□□□ -0.59
TGFB3-201ENST00000238682 PIP4K2AP48426 406 aaPredicted RBP11.39□□□□□ -0.59
TGFB3-201ENST00000238682 NUCB1Q02818 461 aa11.39□□□□□ -0.59
TGFB3-201ENST00000238682 SIRT2Q8IXJ6 389 aa11.39□□□□□ -0.59
TGFB3-201ENST00000238682 GPR108Q9NPR9 543 aa11.39□□□□□ -0.59
TGFB3-201ENST00000238682 TRMT112Q9UI30 125 aaKnown RBP11.39□□□□□ -0.59
TGFB3-201ENST00000238682 IGHDP01880 384 aa11.39□□□□□ -0.59
TGFB3-201ENST00000238682 CHRM1P11229 460 aaPredicted RBP11.39□□□□□ -0.59
TGFB3-201ENST00000238682 KIAA2012Q0VF49 1180 aa11.39□□□□□ -0.59
TGFB3-201ENST00000238682 UBE3BQ7Z3V4 1068 aa11.39□□□□□ -0.59
TGFB3-201ENST00000238682 PLCD3Q8N3E9 789 aa11.39□□□□□ -0.59
TGFB3-201ENST00000238682 ZNRF3Q9ULT6 936 aa11.39□□□□□ -0.59
TGFB3-201ENST00000238682 CCDC88AQ3V6T2 1871 aa11.38□□□□□ -0.59
TGFB3-201ENST00000238682 ATP5J2-PTCD1G3V325 749 aa11.38□□□□□ -0.59
TGFB3-201ENST00000238682 GPTP24298 496 aa11.38□□□□□ -0.59
TGFB3-201ENST00000238682 EPHX2P34913 555 aa11.38□□□□□ -0.59
TGFB3-201ENST00000238682 CTSWP56202 376 aa11.38□□□□□ -0.59
TGFB3-201ENST00000238682 KIF1BPQ96EK5 621 aa11.38□□□□□ -0.59
TGFB3-201ENST00000238682 IRS4O14654 1257 aaPredicted RBP11.38□□□□□ -0.59
TGFB3-201ENST00000238682 CCDC152Q4G0S7 254 aa11.38□□□□□ -0.59
TGFB3-201ENST00000238682 DPP8Q6V1X1 898 aaPredicted RBP11.38□□□□□ -0.59
TGFB3-201ENST00000238682 LARGE2Q8N3Y3 721 aa11.38□□□□□ -0.59
TGFB3-201ENST00000238682 MPNDQ8N594 471 aa11.38□□□□□ -0.59
TGFB3-201ENST00000238682 KAZALD1Q96I82 304 aa11.38□□□□□ -0.59
TGFB3-201ENST00000238682 BICC1Q9H694 974 aaKnown RBP11.38□□□□□ -0.59
TGFB3-201ENST00000238682 CNTNAP1P78357 1384 aa11.37□□□□□ -0.59
TGFB3-201ENST00000238682 SRGAP3O43295 1099 aa11.37□□□□□ -0.59
TGFB3-201ENST00000238682 HSP90AA1P07900 732 aaKnown RBP11.37□□□□□ -0.59
TGFB3-201ENST00000238682 PDE4DQ08499 809 aa11.37□□□□□ -0.59
TGFB3-201ENST00000238682 IFFO2Q5TF58 517 aa11.37□□□□□ -0.59
TGFB3-201ENST00000238682 HHIPL1Q96JK4 782 aa11.37□□□□□ -0.59
TGFB3-201ENST00000238682 ZNF277Q9NRM2 450 aaPredicted RBP11.37□□□□□ -0.59
TGFB3-201ENST00000238682 A6NJR5 290 aa11.37□□□□□ -0.59
TGFB3-201ENST00000238682 NUTM1Q86Y26 1132 aa11.37□□□□□ -0.59
TGFB3-201ENST00000238682 ADARB2Q9NS39 739 aaKnown RBP11.37□□□□□ -0.59
TGFB3-201ENST00000238682 IGSF5Q9NSI5 407 aa11.37□□□□□ -0.59
TGFB3-201ENST00000238682 ZNF541Q9H0D2 1346 aa11.37□□□□□ -0.59
TGFB3-201ENST00000238682 HOXD11P31277 338 aaPredicted RBP11.36□□□□□ -0.59
TGFB3-201ENST00000238682 RFX5P48382 616 aaPredicted RBP11.36□□□□□ -0.59
TGFB3-201ENST00000238682 DPF2Q92785 391 aa11.36□□□□□ -0.59
TGFB3-201ENST00000238682 PGAP2Q9UHJ9 254 aa11.36□□□□□ -0.59
TGFB3-201ENST00000238682 LTBP1Q14766 1721 aa11.36□□□□□ -0.59
TGFB3-201ENST00000238682 TMEM88BA6NKF7 163 aa11.36□□□□□ -0.59
TGFB3-201ENST00000238682 PPIP5K2O43314 1243 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms