RNA–Protein interactions for RNA: ENST00000238633.6

NPC2-201, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene NPC2, Length 796 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-201ENST00000238633 SPRYD7Q5W111 196 aa12.24□□□□□ -0.45
NPC2-201ENST00000238633 PLBD2Q8NHP8 589 aa12.24□□□□□ -0.45
NPC2-201ENST00000238633 CHPF2Q9P2E5 772 aa12.24□□□□□ -0.45
NPC2-201ENST00000238633 GGA1Q9UJY5 639 aa12.24□□□□□ -0.45
NPC2-201ENST00000238633 CUL9Q8IWT3 2517 aa12.24□□□□□ -0.45
NPC2-201ENST00000238633 DDX60Q8IY21 1712 aaKnown RBP12.23□□□□□ -0.45
NPC2-201ENST00000238633 SREBF2Q12772 1141 aa12.23□□□□□ -0.45
NPC2-201ENST00000238633 TTLL12Q14166 644 aaPredicted RBP12.23□□□□□ -0.45
NPC2-201ENST00000238633 INTS3Q68E01 1043 aaKnown RBP12.23□□□□□ -0.45
NPC2-201ENST00000238633 ANKIB1Q9P2G1 1089 aa12.23□□□□□ -0.45
NPC2-201ENST00000238633 FZD1Q9UP38 647 aa12.23□□□□□ -0.45
NPC2-201ENST00000238633 COLQQ9Y215 455 aaPredicted RBP12.23□□□□□ -0.45
NPC2-201ENST00000238633 TRIM17Q9Y577 477 aa12.23□□□□□ -0.45
NPC2-201ENST00000238633 USP17L3A6NCW0 530 aa12.22□□□□□ -0.45
NPC2-201ENST00000238633 USP17L4A6NCW7 530 aa12.22□□□□□ -0.45
NPC2-201ENST00000238633 WNT10BO00744 389 aa12.22□□□□□ -0.45
NPC2-201ENST00000238633 TRIM28Q13263 835 aaKnown RBP12.22□□□□□ -0.45
NPC2-201ENST00000238633 PRKG1Q13976 671 aa12.22□□□□□ -0.45
NPC2-201ENST00000238633 ANKRD13DQ6ZTN6 518 aa12.22□□□□□ -0.45
NPC2-201ENST00000238633 USP17L1Q7RTZ2 530 aa12.22□□□□□ -0.45
NPC2-201ENST00000238633 ARMC5Q96C12 935 aa12.22□□□□□ -0.45
NPC2-201ENST00000238633 BABAM1Q9NWV8 329 aa12.22□□□□□ -0.45
NPC2-201ENST00000238633 DLG5Q8TDM6 1919 aa12.21□□□□□ -0.45
NPC2-201ENST00000238633 G3V3G9 751 aa12.21□□□□□ -0.45
NPC2-201ENST00000238633 IGF2BP3O00425 579 aaKnown RBP eCLIP12.21□□□□□ -0.45
NPC2-201ENST00000238633 DACT2Q5SW24 774 aa12.21□□□□□ -0.45
NPC2-201ENST00000238633 DCAF8Q5TAQ9 597 aa12.21□□□□□ -0.45
NPC2-201ENST00000238633 IFNL1Q8IU54 200 aa12.21□□□□□ -0.45
NPC2-201ENST00000238633 PTPN22Q9Y2R2 807 aa12.21□□□□□ -0.45
NPC2-201ENST00000238633 SASH1O94885 1247 aa12.2□□□□□ -0.46
NPC2-201ENST00000238633 NEFMP07197 916 aa12.2□□□□□ -0.46
NPC2-201ENST00000238633 RIPK4P57078 832 aa12.2□□□□□ -0.46
NPC2-201ENST00000238633 PODNQ7Z5L7 613 aa12.2□□□□□ -0.46
NPC2-201ENST00000238633 ZBED3Q96IU2 234 aaPredicted RBP12.2□□□□□ -0.46
NPC2-201ENST00000238633 CHL1O00533 1208 aa12.19□□□□□ -0.46
NPC2-201ENST00000238633 ALDH1A1P00352 501 aa12.19□□□□□ -0.46
NPC2-201ENST00000238633 ARMC9Q7Z3E5 817 aa12.19□□□□□ -0.46
NPC2-201ENST00000238633 ZBTB38Q8NAP3 1195 aaPredicted RBP12.19□□□□□ -0.46
NPC2-201ENST00000238633 CD99L2Q8TCZ2 262 aa12.19□□□□□ -0.46
NPC2-201ENST00000238633 JARID2Q92833 1246 aaPredicted RBP12.19□□□□□ -0.46
NPC2-201ENST00000238633 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
NPC2-201ENST00000238633 CLMNQ96JQ2 1002 aa12.19□□□□□ -0.46
NPC2-201ENST00000238633 COL6A3P12111 3177 aa12.19□□□□□ -0.46
NPC2-201ENST00000238633 XDHP47989 1333 aa12.18□□□□□ -0.46
NPC2-201ENST00000238633 NF2P35240 595 aa12.18□□□□□ -0.46
NPC2-201ENST00000238633 GJA5P36382 358 aa12.18□□□□□ -0.46
NPC2-201ENST00000238633 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
NPC2-201ENST00000238633 CCER1Q8TC90 406 aaPredicted RBP12.18□□□□□ -0.46
NPC2-201ENST00000238633 CCDC85AQ96PX6 553 aaPredicted RBP12.18□□□□□ -0.46
NPC2-201ENST00000238633 ANGEL1Q9UNK9 670 aaKnown RBP12.18□□□□□ -0.46
NPC2-201ENST00000238633 MAPK8IP3Q9UPT6 1336 aa12.17□□□□□ -0.46
NPC2-201ENST00000238633 MANSC4A6NHS7 340 aaPredicted RBP12.17□□□□□ -0.46
NPC2-201ENST00000238633 H0YGN5 161 aa12.17□□□□□ -0.46
NPC2-201ENST00000238633 ATP2B4P23634 1241 aa12.17□□□□□ -0.46
NPC2-201ENST00000238633 TMPOP42166 694 aaKnown RBP12.17□□□□□ -0.46
NPC2-201ENST00000238633 INHBEP58166 350 aa12.17□□□□□ -0.46
NPC2-201ENST00000238633 CRHR2Q13324 411 aa12.17□□□□□ -0.46
NPC2-201ENST00000238633 MAP3K11Q16584 847 aa12.17□□□□□ -0.46
NPC2-201ENST00000238633 HDGFL1Q5TGJ6 251 aa12.17□□□□□ -0.46
NPC2-201ENST00000238633 TXNRD3Q86VQ6 643 aa12.17□□□□□ -0.46
NPC2-201ENST00000238633 MIER1Q8N108 512 aa12.17□□□□□ -0.46
NPC2-201ENST00000238633 SLC10A4Q96EP9 437 aa12.17□□□□□ -0.46
NPC2-201ENST00000238633 WNK4Q96J92 1243 aa12.17□□□□□ -0.46
NPC2-201ENST00000238633 ZNF333Q96JL9 665 aa12.17□□□□□ -0.46
NPC2-201ENST00000238633 PTPN18Q99952 460 aa12.17□□□□□ -0.46
NPC2-201ENST00000238633 LAMA3Q16787 3333 aa12.16□□□□□ -0.46
NPC2-201ENST00000238633 CCDC152Q4G0S7 254 aa12.16□□□□□ -0.46
NPC2-201ENST00000238633 STRIP1Q5VSL9 837 aa12.16□□□□□ -0.46
NPC2-201ENST00000238633 ERO1AQ96HE7 468 aa12.16□□□□□ -0.46
NPC2-201ENST00000238633 EFCC1Q9HA90 598 aa12.16□□□□□ -0.46
NPC2-201ENST00000238633 SSC5DA1L4H1 1573 aa12.16□□□□□ -0.46
NPC2-201ENST00000238633 ZBTB48P10074 688 aaPredicted RBP12.15□□□□□ -0.46
NPC2-201ENST00000238633 OGFOD1Q8N543 542 aa12.15□□□□□ -0.46
NPC2-201ENST00000238633 DEFB129Q9H1M3 183 aa12.15□□□□□ -0.46
NPC2-201ENST00000238633 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.15□□□□□ -0.46
NPC2-201ENST00000238633 DBF4Q9UBU7 674 aaPredicted RBP12.15□□□□□ -0.46
NPC2-201ENST00000238633 MINPP1Q9UNW1 487 aa12.15□□□□□ -0.46
NPC2-201ENST00000238633 MED23Q9ULK4 1368 aa12.15□□□□□ -0.46
NPC2-201ENST00000238633 PDE8AO60658 829 aa12.14□□□□□ -0.47
NPC2-201ENST00000238633 PCCAP05165 728 aaPredicted RBP12.14□□□□□ -0.47
NPC2-201ENST00000238633 KLRK1P26718 216 aa12.14□□□□□ -0.47
NPC2-201ENST00000238633 APOBEC3FQ8IUX4 373 aaKnown RBP12.14□□□□□ -0.47
NPC2-201ENST00000238633 ANKRD18AQ8IVF6 992 aa12.14□□□□□ -0.47
NPC2-201ENST00000238633 PNNQ9H307 717 aaKnown RBP12.14□□□□□ -0.47
NPC2-201ENST00000238633 HYPKQ9NX55 129 aa12.14□□□□□ -0.47
NPC2-201ENST00000238633 TRIM35Q9UPQ4 493 aa12.14□□□□□ -0.47
NPC2-201ENST00000238633 PCDHAC2Q9Y5I4 1007 aa12.14□□□□□ -0.47
NPC2-201ENST00000238633 PSME4Q14997 1843 aa12.14□□□□□ -0.47
NPC2-201ENST00000238633 AOX1Q06278 1338 aa12.13□□□□□ -0.47
NPC2-201ENST00000238633 TESPA1A2RU30 521 aaPredicted RBP12.13□□□□□ -0.47
NPC2-201ENST00000238633 HOXB7P09629 217 aa12.13□□□□□ -0.47
NPC2-201ENST00000238633 SP3Q02447 781 aa12.13□□□□□ -0.47
NPC2-201ENST00000238633 KIAA0825Q8IV33 1275 aa12.13□□□□□ -0.47
NPC2-201ENST00000238633 PLCD3Q8N3E9 789 aa12.13□□□□□ -0.47
NPC2-201ENST00000238633 FBXW7Q969H0 707 aa12.13□□□□□ -0.47
NPC2-201ENST00000238633 MYD88Q99836 296 aa12.13□□□□□ -0.47
NPC2-201ENST00000238633 COA1Q9GZY4 146 aa12.13□□□□□ -0.47
NPC2-201ENST00000238633 PHAXQ9H814 394 aaKnown RBP12.13□□□□□ -0.47
NPC2-201ENST00000238633 PTCH2Q9Y6C5 1203 aa12.13□□□□□ -0.47
NPC2-201ENST00000238633 MYO3BQ8WXR4 1341 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms