RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 TBC1D2BQ9UPU7 963 aa10.77□□□□□ -0.69
SYDE2-201ENST00000234668 WDR17Q8IZU2 1322 aa10.77□□□□□ -0.69
SYDE2-201ENST00000234668 TRPM3Q9HCF6 1732 aaPredicted RBP10.77□□□□□ -0.69
SYDE2-201ENST00000234668 FGAP02671 866 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 CCDC186Q7Z3E2 898 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 CCAR1Q8IX12 1150 aaKnown RBP10.76□□□□□ -0.69
SYDE2-201ENST00000234668 GOLPH3LQ9H4A5 285 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 PCDH11XQ9BZA7 1347 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 PCDH11YQ9BZA8 1340 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 APPP05067 770 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 TCIRG1Q13488 830 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 CCDC158Q5M9N0 1113 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 SASS6Q6UVJ0 657 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 FAM200AQ8TCP9 573 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 GREM2Q9H772 168 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 CRYBG1Q9Y4K1 1723 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 TNS3Q68CZ2 1445 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 FOXP2O15409 715 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 PFKFB2O60825 505 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 MCM5P33992 734 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 ADD1P35611 737 aaKnown RBP10.76□□□□□ -0.69
SYDE2-201ENST00000234668 ME1P48163 572 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 ZNF165P49910 485 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 EXOSC10Q01780 885 aaKnown RBP10.76□□□□□ -0.69
SYDE2-201ENST00000234668 LDHAL6AQ6ZMR3 332 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 SLAIN2Q9P270 581 aa10.76□□□□□ -0.69
SYDE2-201ENST00000234668 ARID5BQ14865 1188 aa10.75□□□□□ -0.69
SYDE2-201ENST00000234668 METTL24Q5JXM2 366 aa10.75□□□□□ -0.69
SYDE2-201ENST00000234668 ISM2Q6H9L7 571 aa10.75□□□□□ -0.69
SYDE2-201ENST00000234668 PIBF1Q8WXW3 757 aa10.75□□□□□ -0.69
SYDE2-201ENST00000234668 AIFM3Q96NN9 605 aa10.75□□□□□ -0.69
SYDE2-201ENST00000234668 HELLSQ9NRZ9 838 aa10.75□□□□□ -0.69
SYDE2-201ENST00000234668 SIPA1L3O60292 1781 aaPredicted RBP10.75□□□□□ -0.69
SYDE2-201ENST00000234668 A0A1B0GVL5 298 aa10.75□□□□□ -0.69
SYDE2-201ENST00000234668 ERVV-2B6SEH9 535 aa10.75□□□□□ -0.69
SYDE2-201ENST00000234668 RRP9O43818 475 aaKnown RBP10.75□□□□□ -0.69
SYDE2-201ENST00000234668 IDH1O75874 414 aaKnown RBP10.75□□□□□ -0.69
SYDE2-201ENST00000234668 FDPSP14324 419 aaKnown RBP10.75□□□□□ -0.69
SYDE2-201ENST00000234668 IFIT5Q13325 482 aaKnown RBP10.75□□□□□ -0.69
SYDE2-201ENST00000234668 C11orf57Q6ZUT1 292 aaPredicted RBP10.75□□□□□ -0.69
SYDE2-201ENST00000234668 VSIG10Q8N0Z9 540 aa10.75□□□□□ -0.69
SYDE2-201ENST00000234668 CLSTN2Q9H4D0 955 aa10.75□□□□□ -0.69
SYDE2-201ENST00000234668 SH3TC1Q8TE82 1336 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 ALDH8A1Q9H2A2 487 aaPredicted RBP10.74□□□□□ -0.69
SYDE2-201ENST00000234668 CNNM1Q9NRU3 951 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 SCN11AQ9UI33 1791 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 CAMTA1Q9Y6Y1 1673 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 PHRF1Q9P1Y6 1649 aaKnown RBP10.74□□□□□ -0.69
SYDE2-201ENST00000234668 JCADQ9P266 1359 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 ZNF335Q9H4Z2 1342 aaPredicted RBP10.74□□□□□ -0.69
SYDE2-201ENST00000234668 KLF18A0A0U1RQI7 1052 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 UBE2Q2LH0YL09 131 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 ITGA6P23229 1130 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 ILDR1Q86SU0 546 aaPredicted RBP10.74□□□□□ -0.69
SYDE2-201ENST00000234668 SMARCC2Q8TAQ2 1214 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 DSCC1Q9BVC3 393 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 SENP2Q9HC62 589 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 PALLDQ8WX93 1383 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 ELP1O95163 1332 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 PRC1O43663 620 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 ISCA1Q9BUE6 129 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 BTG4Q9NY30 223 aa10.74□□□□□ -0.69
SYDE2-201ENST00000234668 BIN1O00499 593 aa10.73□□□□□ -0.69
SYDE2-201ENST00000234668 MCAMP43121 646 aa10.73□□□□□ -0.69
SYDE2-201ENST00000234668 FSIP1Q8NA03 581 aa10.73□□□□□ -0.69
SYDE2-201ENST00000234668 SLC4A9Q96Q91 983 aa10.73□□□□□ -0.69
SYDE2-201ENST00000234668 MYL10Q9BUA6 226 aa10.73□□□□□ -0.69
SYDE2-201ENST00000234668 ATG3Q9NT62 314 aa10.73□□□□□ -0.69
SYDE2-201ENST00000234668 CFAP45Q9UL16 551 aa10.73□□□□□ -0.69
SYDE2-201ENST00000234668 CLIC4Q9Y696 253 aa10.73□□□□□ -0.69
SYDE2-201ENST00000234668 GOLGA8BA8MQT2 603 aa10.73□□□□□ -0.69
SYDE2-201ENST00000234668 GPAA1O43292 621 aa10.73□□□□□ -0.69
SYDE2-201ENST00000234668 ATP2B3Q16720 1220 aa10.73□□□□□ -0.69
SYDE2-201ENST00000234668 SLC9C2Q5TAH2 1124 aa10.73□□□□□ -0.69
SYDE2-201ENST00000234668 KIF6Q6ZMV9 814 aa10.73□□□□□ -0.69
SYDE2-201ENST00000234668 DDX19AQ9NUU7 478 aaKnown RBP10.73□□□□□ -0.69
SYDE2-201ENST00000234668 TRMT112Q9UI30 125 aaKnown RBP10.73□□□□□ -0.69
SYDE2-201ENST00000234668 CCDC144BQ3MJ40 725 aa10.72□□□□□ -0.69
SYDE2-201ENST00000234668 CCDC82Q8N4S0 544 aa10.72□□□□□ -0.69
SYDE2-201ENST00000234668 ZBTB1Q9Y2K1 713 aa10.72□□□□□ -0.69
SYDE2-201ENST00000234668 AFDNP55196 1824 aaKnown RBP10.72□□□□□ -0.69
SYDE2-201ENST00000234668 PHKA1P46020 1223 aa10.72□□□□□ -0.69
SYDE2-201ENST00000234668 ANTXR2P58335 489 aa10.72□□□□□ -0.69
SYDE2-201ENST00000234668 KIAA1524Q8TCG1 905 aa10.72□□□□□ -0.69
SYDE2-201ENST00000234668 CARD10Q9BWT7 1032 aa10.72□□□□□ -0.69
SYDE2-201ENST00000234668 ZSCAN16Q9H4T2 348 aaPredicted RBP10.72□□□□□ -0.69
SYDE2-201ENST00000234668 ORC3Q9UBD5 711 aaPredicted RBP10.72□□□□□ -0.69
SYDE2-201ENST00000234668 IQSEC3Q9UPP2 1182 aaPredicted RBP10.72□□□□□ -0.69
SYDE2-201ENST00000234668 ZNF213O14771 459 aa10.71□□□□□ -0.69
SYDE2-201ENST00000234668 HMGB1P09429 215 aaKnown RBP10.71□□□□□ -0.69
SYDE2-201ENST00000234668 MARCKSP29966 332 aaPredicted RBP10.71□□□□□ -0.69
SYDE2-201ENST00000234668 SF3A1Q15459 793 aaKnown RBP10.71□□□□□ -0.69
SYDE2-201ENST00000234668 IMMTQ16891 758 aaKnown RBP10.71□□□□□ -0.69
SYDE2-201ENST00000234668 FILIP1Q7Z7B0 1213 aa10.71□□□□□ -0.69
SYDE2-201ENST00000234668 PHKBQ93100 1093 aa10.71□□□□□ -0.69
SYDE2-201ENST00000234668 SDF4Q9BRK5 362 aa10.71□□□□□ -0.69
SYDE2-201ENST00000234668 PIH1D3Q9NQM4 214 aaKnown RBP10.71□□□□□ -0.69
SYDE2-201ENST00000234668 PCDHA7Q9UN72 937 aa10.71□□□□□ -0.69
SYDE2-201ENST00000234668 ALS2Q96Q42 1657 aa10.71□□□□□ -0.69
SYDE2-201ENST00000234668 CPLX1O14810 134 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms