RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 LRRC27Q9C0I9 530 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 HOMER2Q9NSB8 354 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 VAMP4O75379 141 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 KSR2Q6VAB6 950 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 TBC1D5Q92609 795 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 CHMLP26374 656 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 UBXN1Q04323 297 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 FEZ1Q99689 392 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 CNNM2Q9H8M5 875 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 TFCP2Q12800 502 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 ATRIPQ8WXE1 791 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 PHACTR2O75167 634 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 CCDC152Q4G0S7 254 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 PLIN2Q99541 437 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 GRIN2AQ12879 1464 aa15.22■□□□□ 0.03
NEK4-201ENST00000233027 LDHCP07864 332 aa15.21■□□□□ 0.03
NEK4-201ENST00000233027 CAPN2P17655 700 aa15.21■□□□□ 0.03
NEK4-201ENST00000233027 DNAJC21Q5F1R6 531 aaKnown RBP15.21■□□□□ 0.03
NEK4-201ENST00000233027 CCDC155Q8N6L0 562 aa15.21■□□□□ 0.03
NEK4-201ENST00000233027 KRT13P13646 458 aa15.21■□□□□ 0.03
NEK4-201ENST00000233027 TEX13AQ9BXU3 409 aaPredicted RBP15.21■□□□□ 0.03
NEK4-201ENST00000233027 PRAG1Q86YV5 1406 aa15.21■□□□□ 0.03
NEK4-201ENST00000233027 TACC1O75410 805 aa15.21■□□□□ 0.03
NEK4-201ENST00000233027 FANCAO15360 1455 aa15.21■□□□□ 0.02
NEK4-201ENST00000233027 F8W031 263 aaPredicted RBP15.21■□□□□ 0.02
NEK4-201ENST00000233027 PSMA7O14818 248 aa15.21■□□□□ 0.02
NEK4-201ENST00000233027 MCM7P33993 719 aa15.21■□□□□ 0.02
NEK4-201ENST00000233027 NAPAP54920 295 aa15.21■□□□□ 0.02
NEK4-201ENST00000233027 UTP14AQ9BVJ6 771 aaKnown RBP15.21■□□□□ 0.02
NEK4-201ENST00000233027 DNAI2Q9GZS0 605 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 HLA-DOAP06340 250 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 GJC1P36383 396 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 ALDH1L1O75891 902 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 HSPA4P34932 840 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 MIGA1Q8NAN2 632 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 SELENOOQ9BVL4 669 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 TTC41PQ6P2S7 1318 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 A0A1B0GVL5 298 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 PICALMQ13492 652 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 MICALL1Q8N3F8 863 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 SELENOSQ9BQE4 189 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 RRAGDQ9NQL2 400 aaPredicted RBP15.2■□□□□ 0.02
NEK4-201ENST00000233027 IVLP07476 585 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 KRT2P35908 639 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 OTUD7AQ8TE49 926 aaPredicted RBP15.2■□□□□ 0.02
NEK4-201ENST00000233027 GTF3C6Q969F1 213 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 LRRC59Q96AG4 307 aaKnown RBP15.2■□□□□ 0.02
NEK4-201ENST00000233027 POLKQ9UBT6 870 aa15.2■□□□□ 0.02
NEK4-201ENST00000233027 SMIM23A6NLE4 172 aa15.19■□□□□ 0.02
NEK4-201ENST00000233027 RNF113AO15541 343 aaKnown RBP15.19■□□□□ 0.02
NEK4-201ENST00000233027 BMP15O95972 392 aa15.19■□□□□ 0.02
NEK4-201ENST00000233027 GTF2A1P52655 376 aaPredicted RBP15.19■□□□□ 0.02
NEK4-201ENST00000233027 CCDC174Q6PII3 467 aa15.19■□□□□ 0.02
NEK4-201ENST00000233027 TMTC2Q8N394 836 aa15.19■□□□□ 0.02
NEK4-201ENST00000233027 KDM5BQ9UGL1 1544 aa15.19■□□□□ 0.02
NEK4-201ENST00000233027 DTNBO60941 627 aa15.19■□□□□ 0.02
NEK4-201ENST00000233027 BBXQ8WY36 941 aaPredicted RBP15.19■□□□□ 0.02
NEK4-201ENST00000233027 CABP5Q9NP86 173 aa15.19■□□□□ 0.02
NEK4-201ENST00000233027 MRVI1Q9Y6F6 885 aa15.19■□□□□ 0.02
NEK4-201ENST00000233027 POLR3AO14802 1390 aaPredicted RBP15.19■□□□□ 0.02
NEK4-201ENST00000233027 TTC21AQ8NDW8 1320 aa15.19■□□□□ 0.02
NEK4-201ENST00000233027 MYCNP04198 464 aaPredicted RBP15.19■□□□□ 0.02
NEK4-201ENST00000233027 IL15P40933 162 aaPredicted RBP15.19■□□□□ 0.02
NEK4-201ENST00000233027 SPAG1Q07617 926 aa15.19■□□□□ 0.02
NEK4-201ENST00000233027 TRIM75PA6NK02 468 aa15.19■□□□□ 0.02
NEK4-201ENST00000233027 PHACTR3Q96KR7 559 aa15.19■□□□□ 0.02
NEK4-201ENST00000233027 PSMD1Q99460 953 aa15.19■□□□□ 0.02
NEK4-201ENST00000233027 MAGEB6Q8N7X4 407 aa15.18■□□□□ 0.02
NEK4-201ENST00000233027 ZKSCAN3Q9BRR0 538 aa15.18■□□□□ 0.02
NEK4-201ENST00000233027 MAGEB6P1A0A0J9YX57 407 aa15.18■□□□□ 0.02
NEK4-201ENST00000233027 OPA1O60313 960 aa15.18■□□□□ 0.02
NEK4-201ENST00000233027 NAA16Q6N069 864 aaPredicted RBP15.18■□□□□ 0.02
NEK4-201ENST00000233027 IFT81Q8WYA0 676 aa15.18■□□□□ 0.02
NEK4-201ENST00000233027 BICC1Q9H694 974 aaKnown RBP15.18■□□□□ 0.02
NEK4-201ENST00000233027 IKBKGQ9Y6K9 419 aa15.18■□□□□ 0.02
NEK4-201ENST00000233027 C17orf53Q8N3J3 647 aaPredicted RBP15.18■□□□□ 0.02
NEK4-201ENST00000233027 PPP1R14CQ8TAE6 165 aa15.18■□□□□ 0.02
NEK4-201ENST00000233027 GPATCH8Q9UKJ3 1502 aaKnown RBP15.18■□□□□ 0.02
NEK4-201ENST00000233027 CCDC129Q6ZRS4 1044 aa15.18■□□□□ 0.02
NEK4-201ENST00000233027 GSTO1P78417 241 aa15.18■□□□□ 0.02
NEK4-201ENST00000233027 KIF5AQ12840 1032 aa15.18■□□□□ 0.02
NEK4-201ENST00000233027 ERMNQ8TAM6 284 aa15.18■□□□□ 0.02
NEK4-201ENST00000233027 KRT83P78385 493 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 TTLL12Q14166 644 aaPredicted RBP15.17■□□□□ 0.02
NEK4-201ENST00000233027 AKAP4Q5JQC9 854 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 ACSBG1Q96GR2 724 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 KIF4AO95239 1232 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 CALM1P0DP23 149 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 CALM2P0DP24 149 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 CALM3P0DP25 149 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 HELBQ8NG08 1087 aaPredicted RBP15.17■□□□□ 0.02
NEK4-201ENST00000233027 KRT86O43790 486 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 CCDC172P0C7W6 258 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 HS1BP3Q53T59 392 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 TTC16Q8NEE8 873 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 RASAL2Q9UJF2 1139 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 NBPF6Q5VWK0 638 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 MSL1Q68DK7 614 aa15.17■□□□□ 0.02
NEK4-201ENST00000233027 NBPF5PQ86XG9 351 aaPredicted RBP15.17■□□□□ 0.02
NEK4-201ENST00000233027 NBPF4Q96M43 638 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms