RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 PPEF1O14829 653 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-201ENST00000229265 ST18O60284 1047 aa12.92□□□□□ -0.34
CDCA3-201ENST00000229265 SASH1O94885 1247 aa12.92□□□□□ -0.34
CDCA3-201ENST00000229265 PCCAP05165 728 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-201ENST00000229265 RFX5P48382 616 aaPredicted RBP12.92□□□□□ -0.34
CDCA3-201ENST00000229265 PTPN12Q05209 780 aaKnown RBP12.92□□□□□ -0.34
CDCA3-201ENST00000229265 CRAMP1Q96RY5 1269 aa12.92□□□□□ -0.34
CDCA3-201ENST00000229265 CWC22Q9HCG8 908 aaKnown RBP12.92□□□□□ -0.34
CDCA3-201ENST00000229265 IL1RAPL2Q9NP60 686 aa12.92□□□□□ -0.34
CDCA3-201ENST00000229265 KCNQ5Q9NR82 932 aa12.92□□□□□ -0.34
CDCA3-201ENST00000229265 TRMT112Q9UI30 125 aaKnown RBP12.92□□□□□ -0.34
CDCA3-201ENST00000229265 CDHR2Q9BYE9 1310 aa12.91□□□□□ -0.34
CDCA3-201ENST00000229265 YDJCA8MPS7 323 aa12.91□□□□□ -0.34
CDCA3-201ENST00000229265 FZD9O00144 591 aa12.91□□□□□ -0.34
CDCA3-201ENST00000229265 GTF2E1P29083 439 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-201ENST00000229265 IL15P40933 162 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-201ENST00000229265 IARSP41252 1262 aaKnown RBP12.91□□□□□ -0.34
CDCA3-201ENST00000229265 FOXO4P98177 505 aa12.91□□□□□ -0.34
CDCA3-201ENST00000229265 AOC3Q16853 763 aa12.91□□□□□ -0.34
CDCA3-201ENST00000229265 PARP10Q53GL7 1025 aa12.91□□□□□ -0.34
CDCA3-201ENST00000229265 DLK2Q6UY11 383 aa12.91□□□□□ -0.34
CDCA3-201ENST00000229265 RBM46Q8TBY0 533 aaKnown RBP12.91□□□□□ -0.34
CDCA3-201ENST00000229265 RILPL2Q969X0 211 aa12.91□□□□□ -0.34
CDCA3-201ENST00000229265 CCDC85AQ96PX6 553 aaPredicted RBP12.91□□□□□ -0.34
CDCA3-201ENST00000229265 NYXQ9GZU5 481 aa12.91□□□□□ -0.34
CDCA3-201ENST00000229265 SNRKQ9NRH2 765 aa12.91□□□□□ -0.34
CDCA3-201ENST00000229265 K7ELQ4 463 aaPredicted RBP12.9□□□□□ -0.34
CDCA3-201ENST00000229265 CSF1RP07333 972 aa12.9□□□□□ -0.34
CDCA3-201ENST00000229265 ATP5JP18859 108 aa12.9□□□□□ -0.34
CDCA3-201ENST00000229265 ZBTB38Q8NAP3 1195 aaPredicted RBP12.9□□□□□ -0.34
CDCA3-201ENST00000229265 PTMSP20962 102 aa12.89□□□□□ -0.35
CDCA3-201ENST00000229265 SLC4A3P48751 1232 aa12.89□□□□□ -0.35
CDCA3-201ENST00000229265 KIAA1211Q6ZU35 1233 aa12.89□□□□□ -0.35
CDCA3-201ENST00000229265 UBE3BQ7Z3V4 1068 aa12.89□□□□□ -0.35
CDCA3-201ENST00000229265 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.89□□□□□ -0.35
CDCA3-201ENST00000229265 RPGRQ92834 1020 aaKnown RBP12.89□□□□□ -0.35
CDCA3-201ENST00000229265 ATP6V0A2Q9Y487 856 aa12.89□□□□□ -0.35
CDCA3-201ENST00000229265 SH3TC1Q8TE82 1336 aa12.88□□□□□ -0.35
CDCA3-201ENST00000229265 SCN4AP35499 1836 aa12.88□□□□□ -0.35
CDCA3-201ENST00000229265 SGSM2O43147 1006 aa12.88□□□□□ -0.35
CDCA3-201ENST00000229265 SCNN1DP51172 638 aa12.88□□□□□ -0.35
CDCA3-201ENST00000229265 GPSM2P81274 684 aa12.88□□□□□ -0.35
CDCA3-201ENST00000229265 LMBR1LQ6UX01 489 aa12.88□□□□□ -0.35
CDCA3-201ENST00000229265 AACSQ86V21 672 aa12.88□□□□□ -0.35
CDCA3-201ENST00000229265 EAF2Q96CJ1 260 aaPredicted RBP12.88□□□□□ -0.35
CDCA3-201ENST00000229265 PSMD1Q99460 953 aa12.88□□□□□ -0.35
CDCA3-201ENST00000229265 TAF1DQ9H5J8 278 aaPredicted RBP12.88□□□□□ -0.35
CDCA3-201ENST00000229265 POLLQ9UGP5 575 aa12.88□□□□□ -0.35
CDCA3-201ENST00000229265 AKAP2Q9Y2D5 859 aa12.88□□□□□ -0.35
CDCA3-201ENST00000229265 A0A1B0GUL6 1792 aa12.88□□□□□ -0.35
CDCA3-201ENST00000229265 RAD50Q92878 1312 aa12.88□□□□□ -0.35
CDCA3-201ENST00000229265 ZC3H4Q9UPT8 1303 aaKnown RBP12.88□□□□□ -0.35
CDCA3-201ENST00000229265 RFX7Q2KHR2 1363 aa12.87□□□□□ -0.35
CDCA3-201ENST00000229265 IRS4O14654 1257 aaPredicted RBP12.87□□□□□ -0.35
CDCA3-201ENST00000229265 PDIA4P13667 645 aaKnown RBP12.87□□□□□ -0.35
CDCA3-201ENST00000229265 VEGFAP15692 232 aaPredicted RBP12.87□□□□□ -0.35
CDCA3-201ENST00000229265 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
CDCA3-201ENST00000229265 HSPA4P34932 840 aa12.87□□□□□ -0.35
CDCA3-201ENST00000229265 DDIT3P35638 169 aa12.87□□□□□ -0.35
CDCA3-201ENST00000229265 EPS15P42566 896 aa12.87□□□□□ -0.35
CDCA3-201ENST00000229265 SF3B3Q15393 1217 aaKnown RBP12.87□□□□□ -0.35
CDCA3-201ENST00000229265 NFKBIBQ15653 356 aa12.87□□□□□ -0.35
CDCA3-201ENST00000229265 EPHA10Q5JZY3 1008 aa12.87□□□□□ -0.35
CDCA3-201ENST00000229265 RBM17Q96I25 401 aaKnown RBP12.87□□□□□ -0.35
CDCA3-201ENST00000229265 L3MBTL3Q96JM7 780 aaPredicted RBP12.87□□□□□ -0.35
CDCA3-201ENST00000229265 NLRP3Q96P20 1036 aa12.87□□□□□ -0.35
CDCA3-201ENST00000229265 MYH3P11055 1940 aa12.86□□□□□ -0.35
CDCA3-201ENST00000229265 EYA2O00167 538 aa12.86□□□□□ -0.35
CDCA3-201ENST00000229265 EGFRP00533 1210 aa12.86□□□□□ -0.35
CDCA3-201ENST00000229265 GRAPQ13588 217 aa12.86□□□□□ -0.35
CDCA3-201ENST00000229265 CCDC57Q2TAC2 916 aa12.86□□□□□ -0.35
CDCA3-201ENST00000229265 LRRFIP1Q32MZ4 808 aaKnown RBP12.86□□□□□ -0.35
CDCA3-201ENST00000229265 TNNI3KQ59H18 835 aa12.86□□□□□ -0.35
CDCA3-201ENST00000229265 GRAPLQ8TC17 118 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-201ENST00000229265 KCNB2Q92953 911 aa12.86□□□□□ -0.35
CDCA3-201ENST00000229265 RTFDC1Q9BY42 306 aaPredicted RBP12.86□□□□□ -0.35
CDCA3-201ENST00000229265 PA2G4Q9UQ80 394 aaKnown RBP12.86□□□□□ -0.35
CDCA3-201ENST00000229265 FPGT-TNNI3KV9GXZ4 949 aa12.86□□□□□ -0.35
CDCA3-201ENST00000229265 RTL9Q8NET4 1388 aa12.85□□□□□ -0.35
CDCA3-201ENST00000229265 ITGBL1O95965 494 aaPredicted RBP12.85□□□□□ -0.35
CDCA3-201ENST00000229265 CXCL9Q07325 125 aa12.85□□□□□ -0.35
CDCA3-201ENST00000229265 CLEC17AQ6ZS10 378 aa12.85□□□□□ -0.35
CDCA3-201ENST00000229265 RTKN2Q8IZC4 609 aa12.85□□□□□ -0.35
CDCA3-201ENST00000229265 TM6SF1Q9BZW5 370 aa12.85□□□□□ -0.35
CDCA3-201ENST00000229265 DIAPH3Q9NSV4 1193 aa12.85□□□□□ -0.35
CDCA3-201ENST00000229265 PASKQ96RG2 1323 aa12.85□□□□□ -0.35
CDCA3-201ENST00000229265 SNAP23O00161 211 aa12.84□□□□□ -0.35
CDCA3-201ENST00000229265 HIRAP54198 1017 aaPredicted RBP12.84□□□□□ -0.35
CDCA3-201ENST00000229265 NUCB2P80303 420 aa12.84□□□□□ -0.35
CDCA3-201ENST00000229265 SP8Q8IXZ3 490 aa12.84□□□□□ -0.35
CDCA3-201ENST00000229265 INTS4Q96HW7 963 aaKnown RBP12.84□□□□□ -0.35
CDCA3-201ENST00000229265 CEP126Q9P2H0 1117 aa12.84□□□□□ -0.35
CDCA3-201ENST00000229265 GJA3Q9Y6H8 435 aa12.84□□□□□ -0.35
CDCA3-201ENST00000229265 PPIP5K2O43314 1243 aa12.83□□□□□ -0.36
CDCA3-201ENST00000229265 PDE8AO60658 829 aa12.83□□□□□ -0.36
CDCA3-201ENST00000229265 RAD17O75943 681 aa12.83□□□□□ -0.36
CDCA3-201ENST00000229265 KLRK1P26718 216 aa12.83□□□□□ -0.36
CDCA3-201ENST00000229265 FSTL1Q12841 308 aa12.83□□□□□ -0.36
CDCA3-201ENST00000229265 TSGA10IPQ3SY00 556 aa12.83□□□□□ -0.36
CDCA3-201ENST00000229265 MAP1SQ66K74 1059 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms