RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 HELBQ8NG08 1087 aaPredicted RBP28.17■■■□□ 2.1
VTI1B-201ENST00000216456 FBXW7Q969H0 707 aa28.17■■■□□ 2.1
VTI1B-201ENST00000216456 THSD7BQ9C0I4 1608 aa28.17■■■□□ 2.1
VTI1B-201ENST00000216456 ECE1P42892 770 aa28.16■■■□□ 2.1
VTI1B-201ENST00000216456 PODNQ7Z5L7 613 aa28.16■■■□□ 2.1
VTI1B-201ENST00000216456 DCPSQ96C86 337 aaKnown RBP28.16■■■□□ 2.1
VTI1B-201ENST00000216456 ZIC5Q96T25 663 aa28.16■■■□□ 2.1
VTI1B-201ENST00000216456 MPHOSPH8Q99549 860 aa28.16■■■□□ 2.1
VTI1B-201ENST00000216456 TSKSQ9UJT2 592 aa28.16■■■□□ 2.1
VTI1B-201ENST00000216456 CHMP3Q9Y3E7 222 aa28.16■■■□□ 2.1
VTI1B-201ENST00000216456 CACNA1FO60840 1977 aa28.16■■■□□ 2.1
VTI1B-201ENST00000216456 TAF5LO75529 589 aa28.15■■■□□ 2.1
VTI1B-201ENST00000216456 CHRNDQ07001 517 aa28.15■■■□□ 2.1
VTI1B-201ENST00000216456 SCARF1Q14162 830 aa28.15■■■□□ 2.1
VTI1B-201ENST00000216456 SLC4A10Q6U841 1118 aa28.15■■■□□ 2.1
VTI1B-201ENST00000216456 AGBL3Q8NEM8 1001 aa28.15■■■□□ 2.1
VTI1B-201ENST00000216456 ZNF594Q96JF6 807 aaPredicted RBP28.15■■■□□ 2.1
VTI1B-201ENST00000216456 PSME4Q14997 1843 aa28.15■■■□□ 2.1
VTI1B-201ENST00000216456 ZNF804BA4D1E1 1349 aa28.15■■■□□ 2.1
VTI1B-201ENST00000216456 MAP2K1Q02750 393 aaPredicted RBP28.14■■■□□ 2.1
VTI1B-201ENST00000216456 DACT2Q5SW24 774 aa28.14■■■□□ 2.1
VTI1B-201ENST00000216456 ANGEL2Q5VTE6 544 aaKnown RBP28.14■■■□□ 2.1
VTI1B-201ENST00000216456 ANKRD18BA2A2Z9 1011 aa28.13■■■□□ 2.09
VTI1B-201ENST00000216456 USP17L8P0C7I0 530 aa28.13■■■□□ 2.09
VTI1B-201ENST00000216456 LMBR1LQ6UX01 489 aa28.13■■■□□ 2.09
VTI1B-201ENST00000216456 MYOZ2Q9NPC6 264 aa28.13■■■□□ 2.09
VTI1B-201ENST00000216456 PRDM10Q9NQV6 1147 aa28.13■■■□□ 2.09
VTI1B-201ENST00000216456 LEMD3Q9Y2U8 911 aa28.13■■■□□ 2.09
VTI1B-201ENST00000216456 ZNF646O15015 1829 aaPredicted RBP28.13■■■□□ 2.09
VTI1B-201ENST00000216456 ZNF609O15014 1411 aa28.12■■■□□ 2.09
VTI1B-201ENST00000216456 GRM8O00222 908 aa28.12■■■□□ 2.09
VTI1B-201ENST00000216456 HUNKP57058 714 aa28.12■■■□□ 2.09
VTI1B-201ENST00000216456 IFIT5Q13325 482 aaKnown RBP28.1■■■□□ 2.09
VTI1B-201ENST00000216456 ANKRD2Q9GZV1 360 aa28.1■■■□□ 2.09
VTI1B-201ENST00000216456 COA1Q9GZY4 146 aa28.1■■■□□ 2.09
VTI1B-201ENST00000216456 GBA2Q9HCG7 927 aaPredicted RBP28.1■■■□□ 2.09
VTI1B-201ENST00000216456 NBPF9Q3BBW0 867 aa28.09■■■□□ 2.09
VTI1B-201ENST00000216456 SULF1Q8IWU6 871 aa28.09■■■□□ 2.09
VTI1B-201ENST00000216456 MRPL50Q8N5N7 158 aaKnown RBP28.09■■■□□ 2.09
VTI1B-201ENST00000216456 CDCA5Q96FF9 252 aa28.09■■■□□ 2.09
VTI1B-201ENST00000216456 IRS2Q9Y4H2 1338 aa28.09■■■□□ 2.09
VTI1B-201ENST00000216456 KCNJ4P48050 445 aa28.08■■■□□ 2.09
VTI1B-201ENST00000216456 PRAMEF18Q5VWM3 479 aa28.08■■■□□ 2.09
VTI1B-201ENST00000216456 CDCA7LQ96GN5 454 aa28.08■■■□□ 2.09
VTI1B-201ENST00000216456 KAZALD1Q96I82 304 aa28.08■■■□□ 2.09
VTI1B-201ENST00000216456 SUCLG2Q96I99 432 aa28.08■■■□□ 2.09
VTI1B-201ENST00000216456 HHIPL1Q96JK4 782 aa28.08■■■□□ 2.09
VTI1B-201ENST00000216456 C9orf78Q9NZ63 289 aaPredicted RBP28.08■■■□□ 2.09
VTI1B-201ENST00000216456 SRCIN1Q9C0H9 1055 aa28.07■■■□□ 2.08
VTI1B-201ENST00000216456 PLIN1O60240 522 aa28.06■■■□□ 2.08
VTI1B-201ENST00000216456 NBPF7P0C2Y1 421 aaPredicted RBP28.06■■■□□ 2.08
VTI1B-201ENST00000216456 MAP2K2P36507 400 aa28.06■■■□□ 2.08
VTI1B-201ENST00000216456 GTF2IP78347 998 aa28.06■■■□□ 2.08
VTI1B-201ENST00000216456 STRIP1Q5VSL9 837 aa28.06■■■□□ 2.08
VTI1B-201ENST00000216456 ALDH1L1O75891 902 aa28.05■■■□□ 2.08
VTI1B-201ENST00000216456 SASH1O94885 1247 aa28.05■■■□□ 2.08
VTI1B-201ENST00000216456 TTLL5Q6EMB2 1281 aa28.05■■■□□ 2.08
VTI1B-201ENST00000216456 FAM155AB1AL88 458 aaPredicted RBP28.04■■■□□ 2.08
VTI1B-201ENST00000216456 MOB2Q70IA6 237 aa28.04■■■□□ 2.08
VTI1B-201ENST00000216456 KIAA0825Q8IV33 1275 aa28.04■■■□□ 2.08
VTI1B-201ENST00000216456 C2orf69Q8N8R5 385 aa28.04■■■□□ 2.08
VTI1B-201ENST00000216456 SSH1Q8WYL5 1049 aa28.04■■■□□ 2.08
VTI1B-201ENST00000216456 CD209Q9NNX6 404 aa28.04■■■□□ 2.08
VTI1B-201ENST00000216456 JAG2Q9Y219 1238 aa28.04■■■□□ 2.08
VTI1B-201ENST00000216456 A0A1B0GUL6 1792 aa28.04■■■□□ 2.08
VTI1B-201ENST00000216456 SLFN5Q08AF3 891 aa28.03■■■□□ 2.08
VTI1B-201ENST00000216456 RGMBQ6NW40 437 aa28.03■■■□□ 2.08
VTI1B-201ENST00000216456 BEGAINQ9BUH8 593 aa28.03■■■□□ 2.08
VTI1B-201ENST00000216456 PUS3Q9BZE2 481 aaKnown RBP28.03■■■□□ 2.08
VTI1B-201ENST00000216456 WNT10BO00744 389 aa28.02■■■□□ 2.08
VTI1B-201ENST00000216456 CCDC57Q2TAC2 916 aa28.02■■■□□ 2.08
VTI1B-201ENST00000216456 CERS5Q8N5B7 392 aa28.02■■■□□ 2.08
VTI1B-201ENST00000216456 E9PSI1 815 aa28.01■■■□□ 2.07
VTI1B-201ENST00000216456 TAF7LQ5H9L4 462 aa28.01■■■□□ 2.07
VTI1B-201ENST00000216456 LDHAL6AQ6ZMR3 332 aa28.01■■■□□ 2.07
VTI1B-201ENST00000216456 PCDHAC2Q9Y5I4 1007 aa28.01■■■□□ 2.07
VTI1B-201ENST00000216456 CNNM1Q9NRU3 951 aa28■■■□□ 2.07
VTI1B-201ENST00000216456 ZNF157P51786 506 aaPredicted RBP27.99■■■□□ 2.07
VTI1B-201ENST00000216456 BRPF1P55201 1214 aaPredicted RBP27.99■■■□□ 2.07
VTI1B-201ENST00000216456 OGFOD1Q8N543 542 aa27.99■■■□□ 2.07
VTI1B-201ENST00000216456 NOGQ13253 232 aa27.98■■■□□ 2.07
VTI1B-201ENST00000216456 BICC1Q9H694 974 aaKnown RBP27.98■■■□□ 2.07
VTI1B-201ENST00000216456 MYO3BQ8WXR4 1341 aa27.97■■■□□ 2.07
VTI1B-201ENST00000216456 PITPNM2Q9BZ72 1349 aa27.97■■■□□ 2.07
VTI1B-201ENST00000216456 F8W031 263 aaPredicted RBP27.97■■■□□ 2.07
VTI1B-201ENST00000216456 KIF23Q02241 960 aaPredicted RBP27.97■■■□□ 2.07
VTI1B-201ENST00000216456 C15orf52Q6ZUT6 534 aaKnown RBP27.97■■■□□ 2.07
VTI1B-201ENST00000216456 ANKRD44Q8N8A2 993 aa27.97■■■□□ 2.07
VTI1B-201ENST00000216456 UTYO14607 1347 aa27.96■■■□□ 2.07
VTI1B-201ENST00000216456 AOX1Q06278 1338 aa27.95■■■□□ 2.07
VTI1B-201ENST00000216456 ZBED3Q96IU2 234 aaPredicted RBP27.95■■■□□ 2.06
VTI1B-201ENST00000216456 UBE2Q2LH0YL09 131 aa27.94■■■□□ 2.06
VTI1B-201ENST00000216456 IL1R1P14778 569 aa27.94■■■□□ 2.06
VTI1B-201ENST00000216456 KLHDC4Q8TBB5 520 aa27.94■■■□□ 2.06
VTI1B-201ENST00000216456 SLC10A3P09131 477 aa27.93■■■□□ 2.06
VTI1B-201ENST00000216456 GYG1P46976 350 aa27.93■■■□□ 2.06
VTI1B-201ENST00000216456 LRRC24Q50LG9 513 aa27.93■■■□□ 2.06
VTI1B-201ENST00000216456 ZNF804AQ7Z570 1209 aa27.93■■■□□ 2.06
VTI1B-201ENST00000216456 FZD1Q9UP38 647 aa27.93■■■□□ 2.06
VTI1B-201ENST00000216456 RASAL3Q86YV0 1011 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 261.9 ms