RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 RNF216Q9NWF9 866 aaPredicted RBP13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 PALD1Q9ULE6 856 aa13.33□□□□□ -0.28
DNMT3B-201ENST00000201963 ZSCAN16Q9H4T2 348 aaPredicted RBP13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 A0A087WZG4 1122 aa13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 UBASH3AP57075 661 aa13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 ZNHIT6Q9NWK9 470 aaKnown RBP13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 MYO3AQ8NEV4 1616 aa13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 XBP1P17861 261 aa13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 CDR1P51861 262 aa13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 U3KPZ7 1027 aaPredicted RBP13.32□□□□□ -0.28
DNMT3B-201ENST00000201963 ZNF75DP51815 510 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 CCDC57Q2TAC2 916 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 RAB11FIP4Q86YS3 637 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 ZBTB7AO95365 584 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 IFNKQ9P0W0 207 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 RSPH14Q9UHP6 348 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 PARP3Q9Y6F1 533 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 CAPN2P17655 700 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 GTF2A1P52655 376 aaPredicted RBP13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 SMIM5Q71RC9 77 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 UBE3BQ7Z3V4 1068 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 SLC52A2Q9HAB3 445 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 RAI14Q9P0K7 980 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 LRRC7Q96NW7 1537 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 MST1RQ04912 1400 aa13.31□□□□□ -0.28
DNMT3B-201ENST00000201963 LOC102724428A0A0B4J2F2 783 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 LIG1P18858 919 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 SIK1P57059 783 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 CNNM3Q8NE01 707 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 TMEM131LA2VDJ0 1609 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 PHACTR2O75167 634 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 UTP14CQ5TAP6 766 aaKnown RBP13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 CCDC181Q5TID7 509 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 G2E3Q7L622 706 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 TRIM22Q8IYM9 498 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 ZNF215Q9UL58 517 aaPredicted RBP13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 C6orf229H3BNL8 230 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 RAD21O60216 631 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 CEP89Q96ST8 783 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 MAP3K2Q9Y2U5 619 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 REREQ9P2R6 1566 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 HMGB2P26583 209 aaKnown RBP13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 ANKRD13DQ6ZTN6 518 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 BRMS1Q9HCU9 246 aa13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 MAGEC2Q9UBF1 373 aaPredicted RBP13.3□□□□□ -0.28
DNMT3B-201ENST00000201963 MRPS27Q92552 414 aaKnown RBP13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 ANKIB1Q9P2G1 1089 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 CTNNA3Q9UI47 895 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 CCDC158Q5M9N0 1113 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 SNX14Q9Y5W7 946 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 VPS72Q15906 364 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 VPS53Q5VIR6 699 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 SAMD1Q6SPF0 538 aaPredicted RBP13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 IL17REQ8NFR9 667 aa13.29□□□□□ -0.28
DNMT3B-201ENST00000201963 CYP27B1O15528 508 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 R3HDM1Q15032 1099 aaKnown RBP13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 TTC39AQ5SRH9 613 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 KIAA1328Q86T90 577 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 CCDC82Q8N4S0 544 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 NUP133Q8WUM0 1156 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 ORC3Q9UBD5 711 aaPredicted RBP13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 CCDC148Q8NFR7 591 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 RASSF4Q9H2L5 321 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 MTMR7Q9Y216 660 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 TULP4Q9NRJ4 1543 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 ARHGAP23Q9P227 1491 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 SHTN1A0MZ66 631 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 GOLGA6L9A6NEM1 432 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 CDKL5O76039 1030 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 HMGB1P09429 215 aaKnown RBP13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 ZSCAN25Q6NSZ9 544 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 ATP7BP35670 1465 aa13.28□□□□□ -0.28
DNMT3B-201ENST00000201963 GOLGA8BA8MQT2 603 aa13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 GPR162Q16538 588 aa13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 IMMTQ16891 758 aaKnown RBP13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 CREB3L3Q68CJ9 461 aa13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 KRBA2Q6ZNG9 492 aa13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 RBM5P52756 815 aaKnown RBP eCLIP13.27□□□□□ -0.287e-10■■■■■ 35.1
DNMT3B-201ENST00000201963 EVCP57679 992 aa13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 SRRTQ9BXP5 876 aaKnown RBP13.27□□□□□ -0.28
DNMT3B-201ENST00000201963 PNPLA6Q8IY17 1366 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 MNAT1P51948 309 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 IRX3P78415 501 aaPredicted RBP13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 Q6ZUG5 572 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 KIAA1524Q8TCG1 905 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 PDLIM2Q96JY6 352 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 HYPKQ9NX55 129 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 HMG20BQ9P0W2 317 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 PA2G4Q9UQ80 394 aaKnown RBP13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 MAP9Q49MG5 647 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 PIGBQ92521 554 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 UTP14AQ9BVJ6 771 aaKnown RBP13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 VPS18Q9P253 973 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 SLIT1O75093 1534 aa13.27□□□□□ -0.29
DNMT3B-201ENST00000201963 HAND2P61296 217 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 RUFY3Q7L099 469 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 CEP126Q9P2H0 1117 aa13.26□□□□□ -0.29
DNMT3B-201ENST00000201963 IGHMBP2P38935 993 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms