RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 GABARAPL3Q9BY60 117 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 RIBC2Q9H4K1 309 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 FN3KRPQ9HA64 309 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 TMEM165Q9HC07 324 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 LRP12Q9Y561 859 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 TMEM14AQ9Y6G1 99 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 STAB1Q9NY15 2570 aa12.62□□□□□ -0.39
PHGDH-231ENST00000641939 DNHD1Q96M86 4753 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 PPIAL4EA0A075B759 164 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 CEACAM18A8MTB9 384 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 PPIAL4DF5H284 164 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 H3BNX3 289 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 J3QLI3 93 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 FAM20BO75063 409 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 PPIAL4FP0DN26 164 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 GATA3P23771 443 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 CPT2P23786 658 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 ZFP36P26651 326 aaKnown RBP12.61□□□□□ -0.39
PHGDH-231ENST00000641939 SNCBQ16143 134 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 DCAF12L2Q5VW00 463 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 GID4Q8IVV7 300 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 TEX29Q8N6K0 151 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 CSNK2A3Q8NEV1 391 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 MROQ9BYG7 248 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 C14orf119Q9NWQ9 140 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 ZNF391Q9UJN7 358 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 PPIAL4AQ9Y536 164 aa12.61□□□□□ -0.39
PHGDH-231ENST00000641939 PPIAL4CA0A0B4J2A2 164 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 ACOD1A6NK06 481 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 PSMD9O00233 223 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 PHF1O43189 567 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-231ENST00000641939 POLR2IP36954 125 aaKnown RBP12.6□□□□□ -0.39
PHGDH-231ENST00000641939 SEC61A1P61619 476 aaKnown RBP12.6□□□□□ -0.39
PHGDH-231ENST00000641939 ROM1Q03395 351 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 OR8B8Q15620 311 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 ZNF404Q494X3 552 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 ESCO2Q56NI9 601 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 FAM201AQ5SY85 155 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 ZNF679Q8IYX0 411 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 FTMTQ8N4E7 242 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 OR8B12Q8NGG6 310 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 OR8S1Q8NH09 359 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 TMEM246Q9BRR3 403 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 TMPRSS13Q9BYE2 586 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 ADGRL4Q9HBW9 690 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 HAO2Q9NYQ3 351 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 RNF7Q9UBF6 113 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 MIOXQ9UGB7 285 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 METRNQ9UJH8 293 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 COPS3Q9UNS2 423 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 LRCH1Q9Y2L9 728 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 POLR3KQ9Y2Y1 108 aaPredicted RBP12.6□□□□□ -0.39
PHGDH-231ENST00000641939 ORC6Q9Y5N6 252 aa12.6□□□□□ -0.39
PHGDH-231ENST00000641939 A8MXK9 166 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 PRR32B1ATL7 298 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 PHYHO14832 338 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 ZNF254O75437 659 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 AVPP01185 164 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 ALPLP05186 524 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 GRPP07492 148 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 WNT2P09544 360 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 RPS2P15880 293 aaKnown RBP12.59□□□□□ -0.39
PHGDH-231ENST00000641939 DCTDP32321 178 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 GNALP38405 381 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 RIDAP52758 137 aaKnown RBP12.59□□□□□ -0.39
PHGDH-231ENST00000641939 C1orf229Q6ZS94 237 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-231ENST00000641939 SLC35F2Q8IXU6 374 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 TMEM158Q8WZ71 300 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 RAB3IPQ96QF0 476 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-231ENST00000641939 OR8B4Q96RC9 309 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 MNTQ99583 582 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 C7orf69Q9H7B7 122 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 METTL17Q9H7H0 456 aaPredicted RBP12.59□□□□□ -0.39
PHGDH-231ENST00000641939 C1orf123Q9NWV4 160 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 CLN6Q9NWW5 311 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 FAM206AQ9NX38 181 aa12.59□□□□□ -0.39
PHGDH-231ENST00000641939 LOC105371242A0A075B767 164 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 TMEM269A0A1B0GVZ9 245 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 A6NLC8 198 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 RNF212BA8MTL3 300 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 TRAPPC2LH3BP13 241 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 ACKR3P25106 362 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 CDC42P60953 191 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 CXCR4P61073 352 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 SCGB2A2Q13296 93 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 ZNF829Q3KNS6 432 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-231ENST00000641939 ZNF322Q6U7Q0 402 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-231ENST00000641939 RFLNBQ8N5W9 214 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 OR51G2Q8NGK0 314 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 OR8J1Q8NGP2 316 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 LYZL4Q96KX0 146 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 PAPOLGQ9BWT3 736 aaKnown RBP12.58□□□□□ -0.4
PHGDH-231ENST00000641939 SSBP3Q9BWW4 388 aaPredicted RBP12.58□□□□□ -0.4
PHGDH-231ENST00000641939 TTTY10Q9BZA0 68 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 USE1Q9NZ43 259 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 WARS2Q9UGM6 360 aaKnown RBP12.58□□□□□ -0.4
PHGDH-231ENST00000641939 IKZF2Q9UKS7 526 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 RHBDD3Q9Y3P4 386 aa12.58□□□□□ -0.4
PHGDH-231ENST00000641939 A0A0U1RQV5 110 aa12.57□□□□□ -0.4
PHGDH-231ENST00000641939 hCG_1807616A0A1W2PRN6 198 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms