RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 TTRP02766 147 aa22.5■■□□□ 1.19
VEGFA-231ENST00000640499 DDOSTP39656 456 aa22.5■■□□□ 1.19
VEGFA-231ENST00000640499 ISL1P61371 349 aa22.5■■□□□ 1.19
VEGFA-231ENST00000640499 ZNF91Q05481 1191 aa22.5■■□□□ 1.19
VEGFA-231ENST00000640499 NRG4Q8WWG1 115 aa22.5■■□□□ 1.19
VEGFA-231ENST00000640499 LGALS12Q96DT0 336 aa22.5■■□□□ 1.19
VEGFA-231ENST00000640499 AMBNQ9NP70 447 aa22.5■■□□□ 1.19
VEGFA-231ENST00000640499 PPP1R3CQ9UQK1 317 aa22.5■■□□□ 1.19
VEGFA-231ENST00000640499 RHBDD3Q9Y3P4 386 aa22.5■■□□□ 1.19
VEGFA-231ENST00000640499 SONP18583 2426 aaKnown RBP22.49■■□□□ 1.19
VEGFA-231ENST00000640499 HIVEP2P31629 2446 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 A0A0U1RQV5 110 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 MPZL2O60487 215 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 GMDSO60547 372 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 PTBP3O95758 552 aaKnown RBP22.49■■□□□ 1.19
VEGFA-231ENST00000640499 CFL1P23528 166 aaKnown RBP22.49■■□□□ 1.19
VEGFA-231ENST00000640499 ATP6V1E1P36543 226 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 GATA4P43694 442 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 SRP9P49458 86 aaKnown RBP22.49■■□□□ 1.19
VEGFA-231ENST00000640499 OR8G1Q15617 311 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 MPPED2Q15777 294 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 SMN1Q16637 294 aaKnown RBP22.49■■□□□ 1.19
VEGFA-231ENST00000640499 ZNF691Q5VV52 312 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 PRAMEF6Q5VXH4 476 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 CYB5R2Q6BCY4 276 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 MOGAT3Q86VF5 341 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 ZNF555Q8NEP9 628 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 HPS1Q92902 700 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 ADAT1Q9BUB4 502 aaKnown RBP22.49■■□□□ 1.19
VEGFA-231ENST00000640499 SLC22A4Q9H015 551 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 NUFIP1Q9UHK0 495 aaKnown RBP22.49■■□□□ 1.19
VEGFA-231ENST00000640499 R4GMQ9 66 aa22.49■■□□□ 1.19
VEGFA-231ENST00000640499 DBTP11182 482 aaKnown RBP22.48■■□□□ 1.19
VEGFA-231ENST00000640499 SLC34A1Q06495 639 aa22.48■■□□□ 1.19
VEGFA-231ENST00000640499 ZNF829Q3KNS6 432 aaPredicted RBP22.48■■□□□ 1.19
VEGFA-231ENST00000640499 C6orf52Q5T4I8 152 aa22.48■■□□□ 1.19
VEGFA-231ENST00000640499 LIPNQ5VXI9 398 aa22.48■■□□□ 1.19
VEGFA-231ENST00000640499 CELF2-AS1Q8N7Q2 184 aa22.48■■□□□ 1.19
VEGFA-231ENST00000640499 ZNF649Q9BS31 505 aa22.48■■□□□ 1.19
VEGFA-231ENST00000640499 NPTNQ9Y639 398 aa22.48■■□□□ 1.19
VEGFA-231ENST00000640499 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.47■■□□□ 1.192e-8■■■□□ 14.7
VEGFA-231ENST00000640499 METTL15A6NJ78 407 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 FAM157AC9JC47 383 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 INAFM1C9JVW0 142 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 TMEM178BH3BS89 294 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 SULT1C4O75897 302 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 IGHV2-70P01814 119 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 ZNF16P17020 682 aaPredicted RBP22.47■■□□□ 1.19
VEGFA-231ENST00000640499 GZMKP49863 264 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 KRT74Q7RTS7 529 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 WDR86Q86TI4 376 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 OR51E1Q8TCB6 317 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 CYGBQ8WWM9 190 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 RORBQ92753 470 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 FGF23Q9GZV9 251 aaPredicted RBP22.47■■□□□ 1.19
VEGFA-231ENST00000640499 YAE1D1Q9NRH1 226 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 MRPS18AQ9NVS2 196 aaKnown RBP22.47■■□□□ 1.19
VEGFA-231ENST00000640499 OR52A1Q9UKL2 312 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 SLC22A13Q9Y226 551 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 MYRFQ9Y2G1 1151 aa22.47■■□□□ 1.19
VEGFA-231ENST00000640499 A0A1B0GTI1 187 aa22.46■■□□□ 1.19
VEGFA-231ENST00000640499 ANKRD30BLA7E2S9 258 aa22.46■■□□□ 1.19
VEGFA-231ENST00000640499 RPP14O95059 124 aaKnown RBP22.46■■□□□ 1.19
VEGFA-231ENST00000640499 KRT8P05787 483 aa22.46■■□□□ 1.19
VEGFA-231ENST00000640499 HOXB4P17483 251 aaPredicted RBP22.46■■□□□ 1.19
VEGFA-231ENST00000640499 HOXA4Q00056 320 aaPredicted RBP22.46■■□□□ 1.19
VEGFA-231ENST00000640499 TP53I3Q53FA7 332 aa22.46■■□□□ 1.19
VEGFA-231ENST00000640499 ELMOD2Q8IZ81 293 aa22.46■■□□□ 1.19
VEGFA-231ENST00000640499 DHRSXQ8N5I4 330 aa22.46■■□□□ 1.19
VEGFA-231ENST00000640499 YIPF7Q8N8F6 280 aa22.46■■□□□ 1.19
VEGFA-231ENST00000640499 RAB1CQ92928 201 aa22.46■■□□□ 1.19
VEGFA-231ENST00000640499 Q96MT0 163 aa22.46■■□□□ 1.19
VEGFA-231ENST00000640499 GPR84Q9NQS5 396 aa22.46■■□□□ 1.19
VEGFA-231ENST00000640499 ZNF391Q9UJN7 358 aa22.46■■□□□ 1.19
VEGFA-231ENST00000640499 LOC110117498-PIK3R3F6TDL0 507 aa22.45■■□□□ 1.18
VEGFA-231ENST00000640499 CYB5R3P00387 301 aaPredicted RBP22.45■■□□□ 1.18
VEGFA-231ENST00000640499 SLC3A1Q07837 685 aa22.45■■□□□ 1.18
VEGFA-231ENST00000640499 ZMYND11Q15326 602 aa22.45■■□□□ 1.18
VEGFA-231ENST00000640499 ZNF181Q2M3W8 571 aa22.45■■□□□ 1.18
VEGFA-231ENST00000640499 CDONQ4KMG0 1287 aa22.45■■□□□ 1.18
VEGFA-231ENST00000640499 FAM201AQ5SY85 155 aa22.45■■□□□ 1.18
VEGFA-231ENST00000640499 TTC23Q5W5X9 447 aa22.45■■□□□ 1.18
VEGFA-231ENST00000640499 KLBQ86Z14 1044 aa22.45■■□□□ 1.18
VEGFA-231ENST00000640499 C11orf53Q8IXP5 236 aa22.45■■□□□ 1.18
VEGFA-231ENST00000640499 CSNK2A3Q8NEV1 391 aa22.45■■□□□ 1.18
VEGFA-231ENST00000640499 CNIH3Q8TBE1 160 aa22.45■■□□□ 1.18
VEGFA-231ENST00000640499 Q8TCH9 128 aa22.45■■□□□ 1.18
VEGFA-231ENST00000640499 RNPEPL1Q9HAU8 725 aa22.45■■□□□ 1.18
VEGFA-231ENST00000640499 CST4P01036 141 aa22.44■■□□□ 1.18
VEGFA-231ENST00000640499 GNAO1P09471 354 aa22.44■■□□□ 1.18
VEGFA-231ENST00000640499 CDH15P55291 814 aa22.44■■□□□ 1.18
VEGFA-231ENST00000640499 RIPPLY3P57055 190 aa22.44■■□□□ 1.18
VEGFA-231ENST00000640499 IL5RAQ01344 420 aa22.44■■□□□ 1.18
VEGFA-231ENST00000640499 LAIR2Q6ISS4 152 aa22.44■■□□□ 1.18
VEGFA-231ENST00000640499 Q6ZSR3 168 aa22.44■■□□□ 1.18
VEGFA-231ENST00000640499 LRRC28Q86X40 367 aaPredicted RBP22.44■■□□□ 1.18
VEGFA-231ENST00000640499 CATSPERDQ86XM0 798 aa22.44■■□□□ 1.18
VEGFA-231ENST00000640499 PLPP7Q8NBV4 271 aa22.44■■□□□ 1.18
VEGFA-231ENST00000640499 TIMD4Q96H15 378 aa22.44■■□□□ 1.18
VEGFA-231ENST00000640499 ADI1Q9BV57 179 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms