RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 CA6P23280 308 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 CFL1P23528 166 aaKnown RBP11.22□□□□□ -0.61
GTF3A-209ENST00000640289 RBMXP38159 391 aaKnown RBP11.22□□□□□ -0.61
GTF3A-209ENST00000640289 HNRNPA0Q13151 305 aaKnown RBP11.22□□□□□ -0.61
GTF3A-209ENST00000640289 MED21Q13503 144 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 ALKBH1Q13686 389 aaKnown RBP11.22□□□□□ -0.61
GTF3A-209ENST00000640289 ZMAT1Q5H9K5 638 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 FDX2Q6P4F2 183 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 TMPRSS11AQ6ZMR5 421 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 ZNF525Q8N782 197 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 NEU4Q8WWR8 484 aaPredicted RBP11.22□□□□□ -0.61
GTF3A-209ENST00000640289 GATAD2BQ8WXI9 593 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 MYDGFQ969H8 173 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 ELMOD3Q96FG2 381 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 MYCBPQ99417 103 aaPredicted RBP11.22□□□□□ -0.61
GTF3A-209ENST00000640289 DUSP21Q9H596 190 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 TMEM100Q9NV29 134 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 ZNF391Q9UJN7 358 aa11.22□□□□□ -0.61
GTF3A-209ENST00000640289 IGHV3-64DA0A0J9YX35 117 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 F5H5P2 479 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 MYL12BO14950 172 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 TPD52L2O43399 206 aaKnown RBP11.21□□□□□ -0.61
GTF3A-209ENST00000640289 ERCC1P07992 297 aaPredicted RBP11.21□□□□□ -0.61
GTF3A-209ENST00000640289 ADH4P08319 380 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 COL8A2P25067 703 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 DDOSTP39656 456 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 GBX2P52951 348 aaPredicted RBP11.21□□□□□ -0.61
GTF3A-209ENST00000640289 TNFAIP6P98066 277 aaPredicted RBP11.21□□□□□ -0.61
GTF3A-209ENST00000640289 PCGF3Q3KNV8 242 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 RBM48Q5RL73 367 aaKnown RBP11.21□□□□□ -0.61
GTF3A-209ENST00000640289 EGFL6Q8IUX8 553 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 NANOGP1Q8N7R0 232 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 PLPP7Q8NBV4 271 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 ZNF485Q8NCK3 441 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 WFDC11Q8NEX6 87 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 OR13G1Q8NGZ3 307 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 OR52N1Q8NH53 320 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 BARX1Q9HBU1 254 aaPredicted RBP11.21□□□□□ -0.61
GTF3A-209ENST00000640289 DECR2Q9NUI1 292 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 NKIRAS2Q9NYR9 191 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 MRPL15Q9P015 296 aaKnown RBP11.21□□□□□ -0.61
GTF3A-209ENST00000640289 ZDHHC8Q9ULC8 765 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 RHBDD3Q9Y3P4 386 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 SIRT4Q9Y6E7 314 aaPredicted RBP11.21□□□□□ -0.61
GTF3A-209ENST00000640289 SPG11Q96JI7 2443 aa11.21□□□□□ -0.61
GTF3A-209ENST00000640289 LRBAP50851 2863 aa11.21□□□□□ -0.62
GTF3A-209ENST00000640289 LOC107986453A0A1B0GWG9 222 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 A0A1B0GWJ7 208 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 A6NIN4 97 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 OR4C45A6NMZ5 311 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 ANKRD30BLA7E2S9 258 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 RGS10O43665 173 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 LMX1BO60663 402 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 DHRS3O75911 302 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 CD55P08174 381 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 DAOP14920 347 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 FAHP16930 419 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 CCL1P22362 96 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 MAP2K3P46734 347 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 CCR9P51686 369 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 TESK1Q15569 626 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 OR8G1Q15617 311 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 CARTPTQ16568 116 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 CLEC12BQ2HXU8 276 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 FAM209AQ5JX71 171 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 DOK3Q7L591 496 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 TGIF2LYQ8IUE0 185 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 CSNK2A3Q8NEV1 391 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 SEMA6DQ8NFY4 1073 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 OR14K1Q8NGZ2 314 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 OR10AC1Q8NH08 325 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 ITLN1Q8WWA0 313 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 YIPF5Q969M3 257 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 OR2V2Q96R30 315 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 DIRC2Q96SL1 478 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 PDCD1LG2Q9BQ51 273 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 ADAT1Q9BUB4 502 aaKnown RBP11.2□□□□□ -0.62
GTF3A-209ENST00000640289 PAPOLGQ9BWT3 736 aaKnown RBP11.2□□□□□ -0.62
GTF3A-209ENST00000640289 CDCA4Q9BXL8 241 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 CCDC90BQ9GZT6 254 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 SAP30LQ9HAJ7 183 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 BABAM2Q9NXR7 383 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 TREM2Q9NZC2 230 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 ERGIC3Q9Y282 383 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 PIGLQ9Y2B2 252 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 CACNG2Q9Y698 323 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 V9GYS6 101 aa11.2□□□□□ -0.62
GTF3A-209ENST00000640289 SETXQ7Z333 2677 aaKnown RBP11.2□□□□□ -0.62
GTF3A-209ENST00000640289 ITPR2Q14571 2701 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 USF3Q68DE3 2245 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 ARFGEF3Q5TH69 2177 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 TRBV2A0A0J9YWF9 115 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 ZNF816-ZNF321PA0A0X1KG74 233 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 A0A1B0GVI7 797 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 LOC390937A0A1W2PQ73 354 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 ZNF850A8MQ14 1090 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 SYT7O43581 403 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 CDC14BO60729 498 aa11.19□□□□□ -0.62
GTF3A-209ENST00000640289 MTRF1O75570 445 aaKnown RBP11.19□□□□□ -0.62
GTF3A-209ENST00000640289 ZFPL1O95159 310 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms