RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 J3QRE1 110 aa18.35■□□□□ 0.53
SCN1B-206ENST00000638536 ZNF205O95201 554 aa18.35■□□□□ 0.53
SCN1B-206ENST00000638536 OR2T7P0C7T2 308 aa18.35■□□□□ 0.53
SCN1B-206ENST00000638536 DCTDP32321 178 aa18.35■□□□□ 0.53
SCN1B-206ENST00000638536 POU4F2Q12837 409 aa18.35■□□□□ 0.53
SCN1B-206ENST00000638536 OR2T27Q8NH04 317 aa18.35■□□□□ 0.53
SCN1B-206ENST00000638536 ADAT1Q9BUB4 502 aaKnown RBP18.35■□□□□ 0.53
SCN1B-206ENST00000638536 OPA3Q9H6K4 179 aa18.35■□□□□ 0.53
SCN1B-206ENST00000638536 G6PC2Q9NQR9 355 aa18.35■□□□□ 0.53
SCN1B-206ENST00000638536 RHBDD3Q9Y3P4 386 aa18.35■□□□□ 0.53
SCN1B-206ENST00000638536 MXRA5Q9NR99 2828 aa18.35■□□□□ 0.53
SCN1B-206ENST00000638536 CASQ2O14958 399 aaPredicted RBP18.34■□□□□ 0.53
SCN1B-206ENST00000638536 CYB5R3P00387 301 aaPredicted RBP18.34■□□□□ 0.53
SCN1B-206ENST00000638536 ATP6V1E1P36543 226 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 SRP9P49458 86 aaKnown RBP18.34■□□□□ 0.53
SCN1B-206ENST00000638536 EGR3Q06889 387 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 TMED1Q13445 227 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 OR8B8Q15620 311 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 FAM201AQ5SY85 155 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 OGFRL1Q5TC84 451 aaPredicted RBP18.34■□□□□ 0.53
SCN1B-206ENST00000638536 MEDAGQ5VYS4 303 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 UFSP2Q9NUQ7 469 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 NPTNQ9Y639 398 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 TMEM178BH3BS89 294 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 PHYHO14832 338 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 RPP14O95059 124 aaKnown RBP18.34■□□□□ 0.53
SCN1B-206ENST00000638536 CD200P41217 278 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 GZMKP49863 264 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 RAB1CQ92928 201 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 RDH12Q96NR8 316 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 RGCCQ9H4X1 137 aa18.34■□□□□ 0.53
SCN1B-206ENST00000638536 GMDSO60547 372 aa18.33■□□□□ 0.52
SCN1B-206ENST00000638536 TGFAP01135 160 aa18.33■□□□□ 0.52
SCN1B-206ENST00000638536 IGLV3-1P01715 115 aa18.33■□□□□ 0.52
SCN1B-206ENST00000638536 IGHV2-70P01814 119 aa18.33■□□□□ 0.52
SCN1B-206ENST00000638536 TTRP02766 147 aa18.33■□□□□ 0.52
SCN1B-206ENST00000638536 DDOSTP39656 456 aa18.33■□□□□ 0.52
SCN1B-206ENST00000638536 ZNF91Q05481 1191 aa18.33■□□□□ 0.52
SCN1B-206ENST00000638536 SMN1Q16637 294 aaKnown RBP18.33■□□□□ 0.52
SCN1B-206ENST00000638536 WDR86Q86TI4 376 aa18.33■□□□□ 0.52
SCN1B-206ENST00000638536 OR51E1Q8TCB6 317 aa18.33■□□□□ 0.52
SCN1B-206ENST00000638536 HPS1Q92902 700 aa18.33■□□□□ 0.52
SCN1B-206ENST00000638536 RNF166Q96A37 237 aaPredicted RBP18.33■□□□□ 0.52
SCN1B-206ENST00000638536 LGALS12Q96DT0 336 aa18.33■□□□□ 0.52
SCN1B-206ENST00000638536 C1orf159Q96HA4 380 aa18.33■□□□□ 0.52
SCN1B-206ENST00000638536 NUFIP1Q9UHK0 495 aaKnown RBP18.33■□□□□ 0.52
SCN1B-206ENST00000638536 R4GMQ9 66 aa18.33■□□□□ 0.52
SCN1B-206ENST00000638536 ISPDA4D126 451 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 A8MV72 311 aaPredicted RBP18.32■□□□□ 0.52
SCN1B-206ENST00000638536 WBP4O75554 376 aaKnown RBP18.32■□□□□ 0.52
SCN1B-206ENST00000638536 GATA4P43694 442 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 ZMYND11Q15326 602 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 ZNF829Q3KNS6 432 aaPredicted RBP18.32■□□□□ 0.52
SCN1B-206ENST00000638536 TP53I3Q53FA7 332 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 LIPNQ5VXI9 398 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 YIPF7Q8N8F6 280 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 ZNF555Q8NEP9 628 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 TIMD4Q96H15 378 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 FGF23Q9GZV9 251 aaPredicted RBP18.32■□□□□ 0.52
SCN1B-206ENST00000638536 SLC22A4Q9H015 551 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 DCLRE1BQ9H816 532 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 LPAR2Q9HBW0 351 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 GPR84Q9NQS5 396 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 GTF2A1LQ9UNN4 478 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 SLC22A13Q9Y226 551 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 EXOGQ9Y2C4 368 aaKnown RBP18.32■□□□□ 0.52
SCN1B-206ENST00000638536 MYRFQ9Y2G1 1151 aa18.32■□□□□ 0.52
SCN1B-206ENST00000638536 A0A0U1RQV5 110 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 ACOD1A6NK06 481 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 ANKRD30BLA7E2S9 258 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 LOC110117498-PIK3R3F6TDL0 507 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 PTBP3O95758 552 aaKnown RBP18.31■□□□□ 0.52
SCN1B-206ENST00000638536 DBTP11182 482 aaKnown RBP18.31■□□□□ 0.52
SCN1B-206ENST00000638536 CFL1P23528 166 aaKnown RBP18.31■□□□□ 0.52
SCN1B-206ENST00000638536 CDH15P55291 814 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 SLC3A1Q07837 685 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 DMRTC1Q5HYR2 192 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 PACRGLQ8N7B6 248 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 CELF2-AS1Q8N7Q2 184 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 CYGBQ8WWM9 190 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 RORBQ92753 470 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 ZNF665Q9H7R5 613 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 METTL15A6NJ78 407 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 FAM20BO75063 409 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 IGHV2-5P01817 119 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 KRT8P05787 483 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 ADARB1P78563 741 aaKnown RBP18.31■□□□□ 0.52
SCN1B-206ENST00000638536 ZNF691Q5VV52 312 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 ZNF826PQ6ZT77 177 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 C19orf18Q8NEA5 215 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 NRG4Q8WWG1 115 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 FAM71F1Q96KD3 344 aaPredicted RBP18.31■□□□□ 0.52
SCN1B-206ENST00000638536 PAPOLGQ9BWT3 736 aaKnown RBP18.31■□□□□ 0.52
SCN1B-206ENST00000638536 UBAP1Q9NZ09 502 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 OR52A1Q9UKL2 312 aa18.31■□□□□ 0.52
SCN1B-206ENST00000638536 ZNF850A8MQ14 1090 aa18.3■□□□□ 0.52
SCN1B-206ENST00000638536 MPZL2O60487 215 aa18.3■□□□□ 0.52
SCN1B-206ENST00000638536 GRPP07492 148 aa18.3■□□□□ 0.52
SCN1B-206ENST00000638536 PSMB10P40306 273 aa18.3■□□□□ 0.52
SCN1B-206ENST00000638536 ISL1P61371 349 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms