RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 PTGES3Q15185 160 aaKnown RBP11.57□□□□□ -0.56
PNKP-228ENST00000637325 MPPED2Q15777 294 aa11.57□□□□□ -0.56
PNKP-228ENST00000637325 ZNF404Q494X3 552 aa11.57□□□□□ -0.56
PNKP-228ENST00000637325 AMIGO2Q86SJ2 522 aa11.57□□□□□ -0.56
PNKP-228ENST00000637325 PLPP7Q8NBV4 271 aa11.57□□□□□ -0.56
PNKP-228ENST00000637325 DEFB108BQ8NET1 73 aa11.57□□□□□ -0.56
PNKP-228ENST00000637325 MRI1Q9BV20 369 aa11.57□□□□□ -0.56
PNKP-228ENST00000637325 RGCCQ9H4X1 137 aa11.57□□□□□ -0.56
PNKP-228ENST00000637325 MMP26Q9NRE1 261 aa11.57□□□□□ -0.56
PNKP-228ENST00000637325 H2AFY2Q9P0M6 372 aaPredicted RBP11.57□□□□□ -0.56
PNKP-228ENST00000637325 A0A0A6YYJ9 748 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 hCG_1807616A0A1W2PRN6 198 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 A8MXK9 166 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 TRAPPC2LH3BP13 241 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 MITFO75030 526 aaPredicted RBP11.56□□□□□ -0.56
PNKP-228ENST00000637325 FSTL3O95633 263 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 MRPL3P09001 348 aaKnown RBP11.56□□□□□ -0.56
PNKP-228ENST00000637325 ZNF12P17014 697 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 SLC2A5P22732 501 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 GNALP38405 381 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 GSK3AP49840 483 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 ZNF154Q13106 437 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 KCNJ8Q15842 424 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 SNCBQ16143 134 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 ARMCX4Q5H9R4 360 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 BTNL3Q6UXE8 466 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 LRRN1Q6UXK5 716 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 FTMTQ8N4E7 242 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 BPIFB2Q8N4F0 458 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 C19orf18Q8NEA5 215 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 CSNK2A3Q8NEV1 391 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 TEAD3Q99594 435 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 YIPF3Q9GZM5 350 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 NIPAL2Q9H841 368 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 C1orf123Q9NWV4 160 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 ENOPH1Q9UHY7 261 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 POLR3KQ9Y2Y1 108 aaPredicted RBP11.56□□□□□ -0.56
PNKP-228ENST00000637325 INSIG2Q9Y5U4 225 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 AUP1Q9Y679 476 aa11.56□□□□□ -0.56
PNKP-228ENST00000637325 hCG_38984A0A1B0GV85 526 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 PRKYO43930 277 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 ALOX5APP20292 161 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 FPR2P25090 351 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 PITPNBP48739 271 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 HCCSP53701 268 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 OR8B8Q15620 311 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 SFRP4Q6FHJ7 346 aaPredicted RBP11.55□□□□□ -0.56
PNKP-228ENST00000637325 KCTD18Q6PI47 426 aaPredicted RBP11.55□□□□□ -0.56
PNKP-228ENST00000637325 DCDC5Q6ZRR9 648 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 PRSS45Q7RTY3 260 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 TCEANCQ8N8B7 351 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 LRTOMTQ8WZ04 291 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 DUS3LQ96G46 650 aaKnown RBP11.55□□□□□ -0.56
PNKP-228ENST00000637325 PAPOLGQ9BWT3 736 aaKnown RBP11.55□□□□□ -0.56
PNKP-228ENST00000637325 SUCNR1Q9BXA5 334 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 MROQ9BYG7 248 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 SEMA6AQ9H2E6 1030 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 TRIM36Q9NQ86 728 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 ZNF319Q9P2F9 582 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 CLN8Q9UBY8 286 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 OPN4Q9UHM6 478 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 KLHDC2Q9Y2U9 406 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 LRP12Q9Y561 859 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 TMEM14AQ9Y6G1 99 aa11.55□□□□□ -0.56
PNKP-228ENST00000637325 TRAV38-1A0A0B4J264 116 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 CCDC182A6NF36 153 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 ANXA2P2A6NMY6 339 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 C3orf80F5H4A9 247 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 LGALS8O00214 317 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 VENTXO95231 258 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 PTBP3O95758 552 aaKnown RBP11.54□□□□□ -0.56
PNKP-228ENST00000637325 CD80P33681 288 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 PSMA6P60900 246 aaKnown RBP11.54□□□□□ -0.56
PNKP-228ENST00000637325 SLX4IPQ5VYV7 408 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 KDM4DQ6B0I6 523 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 LYPD2Q6UXB3 125 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 ZNF826PQ6ZT77 177 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 CCDC121Q6ZUS5 278 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 MEPCEQ7L2J0 689 aaKnown RBP11.54□□□□□ -0.56
PNKP-228ENST00000637325 CENPNQ96H22 339 aaPredicted RBP11.54□□□□□ -0.56
PNKP-228ENST00000637325 JMJD8Q96S16 334 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 CNN2Q99439 309 aaKnown RBP11.54□□□□□ -0.56
PNKP-228ENST00000637325 MICU1Q9BPX6 476 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 GABARAPL1Q9H0R8 117 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 IKZF2Q9UKS7 526 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 RHBDD3Q9Y3P4 386 aa11.54□□□□□ -0.56
PNKP-228ENST00000637325 OOEPA6NGQ2 149 aa11.53□□□□□ -0.56
PNKP-228ENST00000637325 ZAR1LA6NP61 321 aa11.53□□□□□ -0.56
PNKP-228ENST00000637325 M0R129 80 aa11.53□□□□□ -0.56
PNKP-228ENST00000637325 PSMD9O00233 223 aa11.53□□□□□ -0.56
PNKP-228ENST00000637325 IL5RAQ01344 420 aa11.53□□□□□ -0.56
PNKP-228ENST00000637325 DEGS2Q6QHC5 323 aa11.53□□□□□ -0.56
PNKP-228ENST00000637325 COMMD2Q86X83 199 aa11.53□□□□□ -0.56
PNKP-228ENST00000637325 OR8B12Q8NGG6 310 aa11.53□□□□□ -0.56
PNKP-228ENST00000637325 FAM81AQ8TBF8 368 aa11.53□□□□□ -0.56
PNKP-228ENST00000637325 TMEM163Q8TC26 289 aa11.53□□□□□ -0.56
PNKP-228ENST00000637325 RAB40AQ8WXH6 277 aa11.53□□□□□ -0.56
PNKP-228ENST00000637325 ASB17Q8WXJ9 295 aa11.53□□□□□ -0.56
PNKP-228ENST00000637325 PIGCQ92535 297 aa11.53□□□□□ -0.56
PNKP-228ENST00000637325 TECTBQ96PL2 329 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms