RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 C2CD4CQ8TF44 421 aa10.21□□□□□ -0.77
CLN6-217ENST00000636964 SH2D2AQ9NP31 389 aa10.21□□□□□ -0.77
CLN6-217ENST00000636964 KMT2EQ8IZD2 1858 aa10.21□□□□□ -0.78
CLN6-217ENST00000636964 SPAARA0A1B0GVQ0 90 aa10.21□□□□□ -0.78
CLN6-217ENST00000636964 NDUFS8O00217 210 aa10.21□□□□□ -0.78
CLN6-217ENST00000636964 ARPC1BO15143 372 aaKnown RBP10.21□□□□□ -0.78
CLN6-217ENST00000636964 GDNFP39905 211 aa10.21□□□□□ -0.78
CLN6-217ENST00000636964 DAP3P51398 398 aaKnown RBP10.21□□□□□ -0.78
CLN6-217ENST00000636964 SEC61A1P61619 476 aaKnown RBP10.21□□□□□ -0.78
CLN6-217ENST00000636964 STPG1Q5TH74 334 aa10.21□□□□□ -0.78
CLN6-217ENST00000636964 YRDCQ86U90 279 aaKnown RBP10.21□□□□□ -0.78
CLN6-217ENST00000636964 OR10AC1Q8NH08 325 aa10.21□□□□□ -0.78
CLN6-217ENST00000636964 MAFIPQ8WZ33 124 aa10.21□□□□□ -0.78
CLN6-217ENST00000636964 KCNK17Q96T54 332 aa10.21□□□□□ -0.78
CLN6-217ENST00000636964 TMPRSS13Q9BYE2 586 aa10.21□□□□□ -0.78
CLN6-217ENST00000636964 HRASLSQ9HDD0 168 aa10.21□□□□□ -0.78
CLN6-217ENST00000636964 FAM86C1Q9NVL1 165 aa10.21□□□□□ -0.78
CLN6-217ENST00000636964 RCE1Q9Y256 329 aa10.21□□□□□ -0.78
CLN6-217ENST00000636964 PHF3Q92576 2039 aaKnown RBP10.21□□□□□ -0.78
CLN6-217ENST00000636964 GPR31O00270 319 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 PIN1P1O15428 100 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 HSPA12AO43301 675 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 SERPINA3P01011 423 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 P04436 131 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 WNT5AP41221 380 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 KCNJ3P48549 501 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 EIF2B1Q14232 305 aaKnown RBP10.2□□□□□ -0.78
CLN6-217ENST00000636964 HACD4Q5VWC8 232 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 SPINK14Q6IE38 97 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 VHLLQ6RSH7 139 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 CBLN2Q8IUK8 224 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 UEVLDQ8IX04 471 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 OR5AK2Q8NH90 309 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 PSMF1Q92530 271 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 NDRG3Q9UGV2 375 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 ZNF281Q9Y2X9 895 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 CFAP47Q6ZTR5 3102 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 UBL3O95164 117 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 SERPINA7P05543 415 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 GIPP09681 153 aaPredicted RBP10.2□□□□□ -0.78
CLN6-217ENST00000636964 RFPL3SP0C7P2 107 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 CBR1P16152 277 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 EIF1AXP47813 144 aaKnown RBP10.2□□□□□ -0.78
CLN6-217ENST00000636964 KRTCAP3Q53RY4 240 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 LDLRAD3Q86YD5 345 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 SPICQ8N5J4 248 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 OR51A4Q8NGJ6 313 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 ZBTB8AQ96BR9 441 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 TMEM14AQ9Y6G1 99 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 MED13Q9UHV7 2174 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 A6NIZ1 184 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 RP2O75695 350 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 PTHLHP12272 177 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 ADCYAP1P18509 176 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 DSCR4P56555 118 aaPredicted RBP10.2□□□□□ -0.78
CLN6-217ENST00000636964 RAP1BP61224 184 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 RAP1AP62834 184 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 TGIF1Q15583 401 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 GLDNQ6ZMI3 551 aaPredicted RBP10.2□□□□□ -0.78
CLN6-217ENST00000636964 PDZD9Q8IXQ8 264 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 GTPBP8Q8N3Z3 284 aaPredicted RBP10.2□□□□□ -0.78
CLN6-217ENST00000636964 ZNF433Q8N7K0 673 aaPredicted RBP10.2□□□□□ -0.78
CLN6-217ENST00000636964 OR2G2Q8NGZ5 317 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 ZNF775Q96BV0 537 aaPredicted RBP10.2□□□□□ -0.78
CLN6-217ENST00000636964 KCTD12Q96CX2 325 aaKnown RBP10.2□□□□□ -0.78
CLN6-217ENST00000636964 TMEM41AQ96HV5 264 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 CMSS1Q9BQ75 279 aaKnown RBP10.2□□□□□ -0.78
CLN6-217ENST00000636964 ABHD6Q9BV23 337 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 ARL6Q9H0F7 186 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 UNKLQ9H9P5 680 aaKnown RBP10.2□□□□□ -0.78
CLN6-217ENST00000636964 SLC22A13Q9Y226 551 aa10.2□□□□□ -0.78
CLN6-217ENST00000636964 A0A1B0GUH1 482 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 EIF1AYO14602 144 aaKnown RBP10.19□□□□□ -0.78
CLN6-217ENST00000636964 SPDEFO95238 335 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 RFC3P40938 356 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 UBE2MP61081 183 aaKnown RBP10.19□□□□□ -0.78
CLN6-217ENST00000636964 MFAP5Q13361 173 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 GK2Q14410 553 aaPredicted RBP10.19□□□□□ -0.78
CLN6-217ENST00000636964 DCAF12L2Q5VW00 463 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 SLC18B1Q6NT16 456 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 GSG1LQ6UXU4 331 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 TMPPEQ6ZT21 453 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 PUSL1Q8N0Z8 303 aaKnown RBP10.19□□□□□ -0.78
CLN6-217ENST00000636964 PRSS35Q8N3Z0 413 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 IL22RA1Q8N6P7 574 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 ZNF676Q8N7Q3 588 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 SLC24A4Q8NFF2 622 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 SGCZQ96LD1 299 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 DEPPQ9NTK1 212 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 TREM2Q9NZC2 230 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 ZNF879B4DU55 563 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 TRAPPC6AO75865 159 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 PNPP00491 289 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 UCHL1P09936 223 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 ZNF823P16415 610 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 ZNF43P17038 809 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 SRMP19623 302 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 ADH6P28332 368 aa10.19□□□□□ -0.78
CLN6-217ENST00000636964 CDC34P49427 236 aaPredicted RBP10.19□□□□□ -0.78
CLN6-217ENST00000636964 ZNF561Q8N587 486 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms