RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 DBHP09172 617 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 FAHP16930 419 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 CTRB1P17538 263 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 OR3A2P47893 321 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 AIMP2Q13155 320 aaKnown RBP12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 PDCD1Q15116 288 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 TOMM20Q15388 145 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 RAB30Q15771 203 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 HSPB2Q16082 182 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 CTRB2Q6GPI1 263 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 ZNF585AQ6P3V2 769 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 MOB3CQ70IA8 216 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 ANKRD37Q7Z713 158 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 D2HGDHQ8N465 521 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 NKAIN3Q8N8D7 197 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 ZSCAN4Q8NAM6 433 aaPredicted RBP12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 OR5AP2Q8NGF4 316 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 MFSD8Q8NHS3 518 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 SLCO5A1Q9H2Y9 848 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 ZNF768Q9H5H4 540 aaKnown RBP12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 C5orf66Q9H5L9 145 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 NCOR1O75376 2440 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 ANKUB1A6NFN9 424 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 STMND1H3BQB6 276 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 ABCD4O14678 606 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 OR2F2O95006 317 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 ISG15P05161 165 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 RPL35P42766 123 aaKnown RBP12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 CX3CR1P49238 355 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 NXPH1P58417 271 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 GABREP78334 506 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 OR2F1Q13607 317 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 DRAM2Q6UX65 266 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 OR10C1Q96KK4 312 aa12.4□□□□□ -0.42
CACNA1A-228ENST00000636610 MED19A0JLT2 244 aaPredicted RBP12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 FAM221AA4D161 298 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 TMEM200CA6NKL6 621 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 CRHP06850 196 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 PNLIPP16233 465 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 ZNF43P17038 809 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 GABRR1P24046 479 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 CLDN17P56750 224 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 CSNK2A1P68400 391 aaPredicted RBP12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 QRFPP83859 136 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 SMAD4Q13485 552 aaKnown RBP12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 CLEC18BQ6UXF7 455 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 ZNF574Q6ZN55 896 aaPredicted RBP12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 LYPD6Q86Y78 171 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 PUSL1Q8N0Z8 303 aaKnown RBP12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 OR5AS1Q8N127 324 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 CSNK2A3Q8NEV1 391 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 ZNF576Q9H609 170 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 SDHAF3Q9NRP4 125 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 EHFQ9NZC4 300 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 SHANK1Q9Y566 2161 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 KNTC1P50748 2209 aa12.4□□□□□ -0.43
CACNA1A-228ENST00000636610 OR5H15A6NDH6 313 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 F8W036 122 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 IGLV3-19P01714 112 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 RCC1P18754 421 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 AKR1C3P42330 323 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 BLOC1S1P78537 153 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 ANKRD55Q3KP44 614 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 PDSS1Q5T2R2 415 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 C20orf196Q8IYI0 205 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 ZFP82Q8N141 532 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 TERB2Q8NHR7 220 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 MVB12AQ96EY5 273 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 WDR77Q9BQA1 342 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 RNF126Q9BV68 326 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 ZNF416Q9BWM5 594 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 IGKV1-9A0A0C4DH69 117 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 A0A1B0GV50 99 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 LOC390937A0A1W2PQ73 354 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 ZNF878C9JN71 531 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 ANGPTL7O43827 346 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 CDC14BO60729 498 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 SCRG1O75711 98 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 SCGB1D2O95969 90 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 SERPINA5P05154 406 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 ZNF17P17021 662 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 PRKACAP17612 351 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 BLVRBP30043 206 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 SSBP1Q04837 148 aaKnown RBP12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 POC1BQ8TC44 478 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 GNRHR2Q96P88 292 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 CRB3Q9BUF7 120 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 PCDHB16Q9NRJ7 776 aa12.39□□□□□ -0.43
CACNA1A-228ENST00000636610 ZNF726A6NNF4 738 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 IGHG1P01857 330 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 PATE4P0C8F1 98 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 ADCYAP1P18509 176 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 SPINK2P20155 84 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 APOBEC1P41238 236 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 RAB32Q13637 225 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 GUSBP11Q6P575 273 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 PGAP1Q75T13 922 aa12.38□□□□□ -0.43
CACNA1A-228ENST00000636610 C6orf201Q7Z4U5 140 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms