RNA–Protein interactions for RNA: ENST00000636466.1

GABRB3-219, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-219ENST00000636466 CLEC1BQ9P126 229 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 KIF25Q9UIL4 384 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 ST8SIA3O43173 380 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 GIPP09681 153 aaPredicted RBP12.73□□□□□ -0.37
GABRB3-219ENST00000636466 GZMMP51124 257 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 UBE2KP61086 200 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 BAXQ07812 192 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 CDC20Q12834 499 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 ELFN2Q5R3F8 820 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 PLXDC2Q6UX71 529 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 ZNF680Q8NEM1 530 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 OR2V1Q8NHB1 315 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 PPP1R1CQ8WVI7 109 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 TCTEX1D2Q8WW35 142 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 PLK3Q9H4B4 646 aa12.73□□□□□ -0.37
GABRB3-219ENST00000636466 PURGQ9UJV8 347 aaKnown RBP12.73□□□□□ -0.37
GABRB3-219ENST00000636466 ZFP92A6NM28 416 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 D6RAR5 112 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 OR13C7P0DN81 318 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 ARL3P36405 182 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 NKX2-1P43699 371 aaPredicted RBP12.72□□□□□ -0.37
GABRB3-219ENST00000636466 MZT1Q08AG7 82 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 IL10RAQ13651 578 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 TFAP2EQ6VUC0 442 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 CDX2Q99626 313 aaPredicted RBP12.72□□□□□ -0.37
GABRB3-219ENST00000636466 ESRP2Q9H6T0 727 aaKnown RBP12.72□□□□□ -0.37
GABRB3-219ENST00000636466 CREBBPQ92793 2442 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 DOCK8Q8NF50 2099 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 TRAV1-2A0A0B4J238 106 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 XRCC3O43542 346 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 HLA-HP01893 362 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 CNR1P21554 472 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 NOVA1P51513 510 aaKnown RBP12.72□□□□□ -0.37
GABRB3-219ENST00000636466 ACER2Q5QJU3 275 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 LPCAT3Q6P1A2 487 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 OR11L1Q8NGX0 322 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 SLC39A9Q9NUM3 307 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 OR5V1Q9UGF6 321 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 IGHV4-34P06331 123 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 PSMB6P28072 239 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 EMP3P54852 163 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 TMEM268Q5VZI3 342 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 NOXO1Q8NFA2 376 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 NME2P1O60361 137 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 IL2RAP01589 272 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 TRAPPC2P0DI81 140 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 TRAPPC2BP0DI82 140 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 ZFP36L2P47974 494 aaKnown RBP12.72□□□□□ -0.37
GABRB3-219ENST00000636466 RAB1AP62820 205 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 EXOSC2Q13868 293 aaKnown RBP12.72□□□□□ -0.37
GABRB3-219ENST00000636466 DGAT2L6Q6ZPD8 337 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 DOK1Q99704 481 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 MOB1AQ9H8S9 216 aa12.72□□□□□ -0.37
GABRB3-219ENST00000636466 OR5H15A6NDH6 313 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 ICMTO60725 284 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 CHATP28329 748 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 OR1C1Q15619 314 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 HIST2H3PS2Q5TEC6 136 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 OPA3Q9H6K4 179 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 KIR2DS1A0A191URI9 304 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 OIP5O43482 229 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 EPPINO95925 133 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 CD80P33681 288 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 KIR2DS4P43632 304 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 C21orf58P58505 322 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 KIR2DS1Q14954 304 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 PRSS53Q2L4Q9 553 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 SPANXN5Q5MJ07 72 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 ZNF774Q6NX45 483 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 OR6K3Q8NGY3 331 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 FBXW5Q969U6 566 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 LIN37Q96GY3 246 aaPredicted RBP12.71□□□□□ -0.37
GABRB3-219ENST00000636466 TAF9BQ9HBM6 251 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 MIA3Q5JRA6 1907 aa12.71□□□□□ -0.37
GABRB3-219ENST00000636466 OR6C6A6NF89 314 aa12.71□□□□□ -0.38
GABRB3-219ENST00000636466 LGALS8O00214 317 aa12.71□□□□□ -0.38
GABRB3-219ENST00000636466 DSCR4P56555 118 aaPredicted RBP12.71□□□□□ -0.38
GABRB3-219ENST00000636466 SSTP61278 116 aa12.71□□□□□ -0.38
GABRB3-219ENST00000636466 OR4A16Q8NH70 328 aa12.71□□□□□ -0.38
GABRB3-219ENST00000636466 RTN4IP1Q8WWV3 396 aaPredicted RBP12.71□□□□□ -0.38
GABRB3-219ENST00000636466 CACNA1BQ00975 2339 aa12.71□□□□□ -0.38
GABRB3-219ENST00000636466 TMEM200CA6NKL6 621 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 SPINT2O43291 252 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 CTSBP07858 339 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 CT45A8P0DMV1 189 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 CT45A9P0DMV2 189 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 NKX6-1P78426 367 aaPredicted RBP12.7□□□□□ -0.38
GABRB3-219ENST00000636466 CT45A2Q5DJT8 189 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 OR52N4Q8NGI2 321 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 TMPRSS13Q9BYE2 586 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 SLC22A20A6NK97 555 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 KRBOX1C9JBD0 128 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 FOXS1O43638 330 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 SCAF4O95104 1147 aaKnown RBP12.7□□□□□ -0.38
GABRB3-219ENST00000636466 HOXA1P49639 335 aaPredicted RBP12.7□□□□□ -0.38
GABRB3-219ENST00000636466 P2RX3P56373 397 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 PIGPP57054 158 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 ZNF141Q15928 474 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 TOR2AQ5JU69 321 aa12.7□□□□□ -0.38
GABRB3-219ENST00000636466 H3F3CQ6NXT2 135 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms