RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 TIMM10BQ9Y5J6 103 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 OR52A4PA6NMU1 304 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 CTBSQ01459 385 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 GAMTQ14353 236 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 OR1Q1Q15612 314 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 FCRLBQ6BAA4 426 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 TRILQ7L0X0 811 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 ANKRD10Q9NXR5 420 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 IL36GQ9NZH8 169 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 CGGBP1Q9UFW8 167 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-212ENST00000636194 A0A0U1RQF3 1178 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 GIPP09681 153 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-212ENST00000636194 FBXO45P0C2W1 286 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 LMO2P25791 158 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 SDHAP31040 664 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 P2RY2P41231 377 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 PCBP4P57723 403 aaKnown RBP5.49□□□□□ -1.53
SCN1A-212ENST00000636194 OR2B8PP59922 312 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 MLLT11Q13015 90 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-212ENST00000636194 CLPPQ16740 277 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-212ENST00000636194 Q499Y3 187 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 TOMM20LQ6UXN7 152 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 C16orf92Q96LL3 132 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 FAM206AQ9NX38 181 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 DSCR3O14972 297 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 LANCL1O43813 399 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF735P0CB33 412 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 PJVKQ0ZLH3 352 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 COX19Q49B96 90 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 DPY19L2P2Q6ZN68 376 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 SYT9Q86SS6 491 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 D2HGDHQ8N465 521 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 ACOT4Q8N9L9 421 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 OR1N1Q8NGS0 311 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 DUS3LQ96G46 650 aaKnown RBP5.49□□□□□ -1.53
SCN1A-212ENST00000636194 OSGIN1Q9UJX0 560 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 CSNK1G3Q9Y6M4 447 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 DOPEY1Q5JWR5 2465 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 LAMB1P07942 1786 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 PRSS38A1L453 326 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 OR4C45A6NMZ5 311 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF749O43361 778 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 NME2P1O60361 137 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 WDR1O75083 606 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 OR8G3PP0DMU2 310 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 FABP2P12104 132 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 RPA2P15927 270 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF542PQ5EBM4 170 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 TEX30Q5JUR7 227 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 EBLN2Q6P2I7 272 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 FCRLAQ7L513 359 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 LRP11Q86VZ4 500 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 CYB561A3Q8NBI2 242 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 TMEM106AQ96A25 262 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 NTNG2Q96CW9 530 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 TNFRSF13CQ96RJ3 184 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 RANBP9Q96S59 729 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 PRRX2Q99811 253 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 DPH2Q9BQC3 489 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-212ENST00000636194 OR52D1Q9H346 318 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 NOCTQ9UK39 431 aaKnown RBP5.49□□□□□ -1.53
SCN1A-212ENST00000636194 NWD2Q9ULI1 1742 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 FAM159BA6NKW6 160 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 CORTO00230 105 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 UPK1AO00322 258 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 NCR1O76036 304 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 PF4V1P10720 104 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 NID1P14543 1247 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 FAM3AP98173 230 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 RTP5Q14D33 572 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 ECM1Q16610 540 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 PIP5KL1Q5T9C9 394 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 CPZQ66K79 652 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 JMJD6Q6NYC1 403 aaPredicted RBP5.49□□□□□ -1.53
SCN1A-212ENST00000636194 ZDHHC23Q8IYP9 409 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 ZNF441Q8N8Z8 693 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 BRI3BPQ8WY22 251 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 GNRHR2Q96P88 292 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 ST6GALNAC4Q9H4F1 302 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 FGF21Q9NSA1 209 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 ASH2LQ9UBL3 628 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 ICAM5Q9UMF0 924 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 PPT2Q9UMR5 302 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 TANC2Q9HCD6 1990 aa5.49□□□□□ -1.53
SCN1A-212ENST00000636194 C5orf49A4QMS7 147 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TLCD2A6NGC4 264 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 M0QZK8 103 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 GGCTO75223 188 aaKnown RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 MYOGP15173 224 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TNFAIP6P98066 277 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 HYAL1Q12794 435 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 SNAI3Q3KNW1 292 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 TOR2AQ5JU69 321 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 IRF2BP2Q7Z5L9 587 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 FAM26EQ8N5C1 309 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 ADTRPQ96IZ2 230 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 HARBI1Q96MB7 349 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 HSD17B10Q99714 261 aaKnown RBP5.48□□□□□ -1.53
SCN1A-212ENST00000636194 C2orf88Q9BSF0 95 aa5.48□□□□□ -1.53
SCN1A-212ENST00000636194 NAT8BQ9UHF3 227 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms