RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 DGCR2P98153 550 aa6.32□□□□□ -1.4
BRCA1-230ENST00000634433 SNTB2Q13425 540 aaKnown RBP6.32□□□□□ -1.4
BRCA1-230ENST00000634433 SF3B4Q15427 424 aaKnown RBP eCLIP6.32□□□□□ -1.4
BRCA1-230ENST00000634433 SLC36A2Q495M3 483 aa6.32□□□□□ -1.4
BRCA1-230ENST00000634433 ETFRF1Q6IPR1 90 aa6.32□□□□□ -1.4
BRCA1-230ENST00000634433 WDFY1Q8IWB7 410 aa6.32□□□□□ -1.4
BRCA1-230ENST00000634433 GJC3Q8NFK1 279 aa6.32□□□□□ -1.4
BRCA1-230ENST00000634433 PSMF1Q92530 271 aa6.32□□□□□ -1.4
BRCA1-230ENST00000634433 SLC25A38Q96DW6 304 aa6.32□□□□□ -1.4
BRCA1-230ENST00000634433 OR2M2Q96R28 347 aa6.32□□□□□ -1.4
BRCA1-230ENST00000634433 ACTR6Q9GZN1 396 aa6.32□□□□□ -1.4
BRCA1-230ENST00000634433 PBOV1Q9GZY1 135 aa6.32□□□□□ -1.4
BRCA1-230ENST00000634433 FAM206AQ9NX38 181 aa6.32□□□□□ -1.4
BRCA1-230ENST00000634433 NUFIP1Q9UHK0 495 aaKnown RBP6.32□□□□□ -1.4
BRCA1-230ENST00000634433 FBXL3Q9UKT7 428 aa6.32□□□□□ -1.4
BRCA1-230ENST00000634433 ZNF716A6NP11 495 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 SYT7O43581 403 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 TRAPPC6AO75865 159 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 TGM6O95932 706 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 ERCC1P07992 297 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-230ENST00000634433 CD3GP09693 182 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 ZNF735P0CB33 412 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 CDK2P24941 298 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 GDF1P27539 372 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 GDNFP39905 211 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 RAG2P55895 527 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 CLDN12P56749 244 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 ANKRD16Q6P6B7 361 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 FOXL2NBQ6ZUU3 175 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 YRDCQ86U90 279 aaKnown RBP6.31□□□□□ -1.4
BRCA1-230ENST00000634433 CCDC54Q8NEL0 328 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 OR5D14Q8NGL3 314 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 OR6M1Q8NGM8 313 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 OR2V1Q8NHB1 315 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 UBASH3BQ8TF42 649 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 DVL3Q92997 716 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-230ENST00000634433 FAM3DQ96BQ1 224 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 NELFAQ9H3P2 528 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 RCE1Q9Y256 329 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 LHFPL6Q9Y693 200 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 A0A0A6YYH2 397 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 LOC101059948A0A1B0GTJ6 334 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 A6NJ64 397 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 P2RY10O00398 339 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 DHHO43323 396 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 RAMP1O60894 148 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 GLSO94925 669 aaPredicted RBP6.31□□□□□ -1.4
BRCA1-230ENST00000634433 WDPCPO95876 746 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 ACSM4P0C7M7 580 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 ITGA3P26006 1051 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 HTR2CP28335 458 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 CD96P40200 585 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 CLDN6P56747 220 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 TAS2R20P59543 309 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 CD300CQ08708 224 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 TATDN3Q17R31 274 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 DCAF10Q5QP82 559 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 LINC00696Q6ZRV3 163 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 PIP4P1Q86T03 277 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 SIAH3Q8IW03 269 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 C20orf196Q8IYI0 205 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 CLEC1AQ8NC01 280 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 DNAAF1Q8NEP3 725 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 OR6F1Q8NGZ6 308 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 ZNF596Q8TC21 504 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 SLC7A6Q92536 515 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 PTX4Q96A99 478 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 TMEM68Q96MH6 324 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 SORCS2Q96PQ0 1159 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 TAS2R8Q9NYW2 309 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 TAS2R4Q9NYW5 299 aa6.31□□□□□ -1.4
BRCA1-230ENST00000634433 PAIP2BQ9ULR5 123 aaKnown RBP6.31□□□□□ -1.4
BRCA1-230ENST00000634433 USP24Q9UPU5 2620 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 GPR179Q6PRD1 2367 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 A0A1W2PNU3 283 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-230ENST00000634433 OR14I1A6ND48 311 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 LRRC3CA6NJW4 275 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 H3BSH0 61 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 WNT11O96014 354 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 BDKRB2P30411 391 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 CDAP32320 146 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 FAUP35544 74 aaKnown RBP6.3□□□□□ -1.4
BRCA1-230ENST00000634433 PTH2RP49190 550 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 PER3P56645 1201 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 SSBP1Q04837 148 aaKnown RBP6.3□□□□□ -1.4
BRCA1-230ENST00000634433 MFAP5Q13361 173 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 KLF9Q13886 244 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-230ENST00000634433 TBRG1Q3YBR2 411 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 STPG1Q5TH74 334 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 FAM166AQ6J272 317 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 PRSS45Q7RTY3 260 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.3□□□□□ -1.4
BRCA1-230ENST00000634433 IZUMO1Q8IYV9 350 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 FAM185AQ8N0U4 392 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 TMEM123Q8N131 208 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 IL22RA1Q8N6P7 574 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 OR51D1Q8NGF3 324 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 ADAMTS17Q8TE56 1095 aa6.3□□□□□ -1.4
BRCA1-230ENST00000634433 CPNE4Q96A23 557 aaPredicted RBP6.3□□□□□ -1.4
BRCA1-230ENST00000634433 FGGYQ96C11 551 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms