RNA–Protein interactions for RNA: ENST00000628665.1

CHRNA4-212, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 4

Gene CHRNA4, Length 546 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-212ENST00000628665 NIPAL2Q9H841 368 aa13.35□□□□□ -0.27
CHRNA4-212ENST00000628665 POLR3KQ9Y2Y1 108 aaPredicted RBP13.35□□□□□ -0.27
CHRNA4-212ENST00000628665 AUP1Q9Y679 476 aa13.35□□□□□ -0.27
CHRNA4-212ENST00000628665 hCG_1807616A0A1W2PRN6 198 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 C5orf63A6NC05 138 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 A8MXK9 166 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 GRPP07492 148 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 FPR2P25090 351 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 SEC61A1P61619 476 aaKnown RBP13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 FAM3AP98173 230 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 PTGES3Q15185 160 aaKnown RBP13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 MPPED2Q15777 294 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 ARMCX4Q5H9R4 360 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 FAM201AQ5SY85 155 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 KCTD18Q6PI47 426 aaPredicted RBP13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 BTNL3Q6UXE8 466 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 DCDC5Q6ZRR9 648 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 C1orf229Q6ZS94 237 aaPredicted RBP13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 BPIFB2Q8N4F0 458 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 BOLLQ8N9W6 283 aaKnown RBP13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 DEFB108BQ8NET1 73 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 CSNK2A3Q8NEV1 391 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 JMJD8Q96S16 334 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 AMELYQ99218 206 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 TEAD3Q99594 435 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 YIPF3Q9GZM5 350 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 TRIM36Q9NQ86 728 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 MMP26Q9NRE1 261 aa13.34□□□□□ -0.27
CHRNA4-212ENST00000628665 PITPNBP48739 271 aa13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 GSK3AP49840 483 aa13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 ZNF154Q13106 437 aa13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 OR8B8Q15620 311 aa13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 LRRN1Q6UXK5 716 aa13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 DVL3Q92997 716 aaPredicted RBP13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 PAPOLGQ9BWT3 736 aaKnown RBP13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 SUCNR1Q9BXA5 334 aa13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 MROQ9BYG7 248 aa13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 C1orf123Q9NWV4 160 aa13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 CLN8Q9UBY8 286 aa13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 ZNF391Q9UJN7 358 aa13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 INSIG2Q9Y5U4 225 aa13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 TMEM14AQ9Y6G1 99 aa13.33□□□□□ -0.28
CHRNA4-212ENST00000628665 TRAV38-1A0A0B4J264 116 aa13.32□□□□□ -0.28
CHRNA4-212ENST00000628665 ANXA2P2A6NMY6 339 aa13.32□□□□□ -0.28
CHRNA4-212ENST00000628665 TRAPPC2LH3BP13 241 aa13.32□□□□□ -0.28
CHRNA4-212ENST00000628665 RGS9O75916 674 aaPredicted RBP13.32□□□□□ -0.28
CHRNA4-212ENST00000628665 ZNF12P17014 697 aa13.32□□□□□ -0.28
CHRNA4-212ENST00000628665 ALOX5APP20292 161 aa13.32□□□□□ -0.28
CHRNA4-212ENST00000628665 SLC2A5P22732 501 aa13.32□□□□□ -0.28
CHRNA4-212ENST00000628665 ANOS1P23352 680 aa13.32□□□□□ -0.28
CHRNA4-212ENST00000628665 USP43Q70EL4 1123 aa13.32□□□□□ -0.28
CHRNA4-212ENST00000628665 PRSS45Q7RTY3 260 aa13.32□□□□□ -0.28
CHRNA4-212ENST00000628665 AMIGO2Q86SJ2 522 aa13.32□□□□□ -0.28
CHRNA4-212ENST00000628665 OPN4Q9UHM6 478 aa13.32□□□□□ -0.28
CHRNA4-212ENST00000628665 DNHD1Q96M86 4753 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 hCG_38984A0A1B0GV85 526 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 C3orf80F5H4A9 247 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 LGALS8O00214 317 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 PHYHO14832 338 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 NDUFA2O43678 99 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 MITFO75030 526 aaPredicted RBP13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 PTBP3O95758 552 aaKnown RBP13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 MRPL3P09001 348 aaKnown RBP13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 NPY4RP50391 375 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 PSMA6P60900 246 aaKnown RBP13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 ACTR3P61158 418 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 IL5RAQ01344 420 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 SFRP4Q6FHJ7 346 aaPredicted RBP13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 DEGS2Q6QHC5 323 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 RBMS3Q6XE24 437 aaKnown RBP13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 CCDC121Q6ZUS5 278 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 TCEANCQ8N8B7 351 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 C19orf18Q8NEA5 215 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 FAM81AQ8TBF8 368 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 RAB40AQ8WXH6 277 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 ASB17Q8WXJ9 295 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 LRTOMTQ8WZ04 291 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 DUS3LQ96G46 650 aaKnown RBP13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 CNN2Q99439 309 aaKnown RBP13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 MICU1Q9BPX6 476 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 ABCB9Q9NP78 766 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 ERVK-18Q9QC07 812 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 LRP12Q9Y561 859 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 MPC1Q9Y5U8 109 aa13.31□□□□□ -0.28
CHRNA4-212ENST00000628665 OOEPA6NGQ2 149 aa13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 ACOD1A6NK06 481 aa13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 SLC22A31A6NKX4 558 aa13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 TRIM77I1YAP6 450 aa13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 PRKYO43930 277 aa13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 ZNF254O75437 659 aa13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 VENTXO95231 258 aa13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 HCCSP53701 268 aa13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 KDM4DQ6B0I6 523 aa13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 MEPCEQ7L2J0 689 aaKnown RBP13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 COMMD2Q86X83 199 aa13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 TMEM163Q8TC26 289 aa13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 ZFAND2BQ8WV99 257 aa13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 CENPNQ96H22 339 aaPredicted RBP13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 TECTBQ96PL2 329 aa13.3□□□□□ -0.28
CHRNA4-212ENST00000628665 HIST1H2AAQ96QV6 131 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms