RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 MVKQ03426 396 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 MRPL28Q13084 256 aaKnown RBP12.55□□□□□ -0.4
PNKP-221ENST00000627317 ELMOD2Q8IZ81 293 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 OR56B2PQ8NGI1 322 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 OR2G2Q8NGZ5 317 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 OR52N1Q8NH53 320 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 OR51E1Q8TCB6 317 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 HAVCR2Q8TDQ0 301 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 GTF3AQ92664 365 aaKnown RBP12.55□□□□□ -0.4
PNKP-221ENST00000627317 ZNF649Q9BS31 505 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 REPIN1Q9BWE0 567 aaKnown RBP12.55□□□□□ -0.4
PNKP-221ENST00000627317 RAB1BQ9H0U4 201 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 TPK1Q9H3S4 243 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 G6PC2Q9NQR9 355 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 GPR84Q9NQS5 396 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 PAK1IP1Q9NWT1 392 aaPredicted RBP12.55□□□□□ -0.4
PNKP-221ENST00000627317 UBAP1Q9NZ09 502 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 CLEC2DQ9UHP7 191 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 SLC22A13Q9Y226 551 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 ERGIC3Q9Y282 383 aa12.55□□□□□ -0.4
PNKP-221ENST00000627317 FN1P02751 2386 aaKnown RBP12.55□□□□□ -0.4
PNKP-221ENST00000627317 ZSCAN5BA6NJL1 495 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 RGS10O43665 173 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 TTRP02766 147 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 HEXAP06865 529 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 HOXB4P17483 251 aaPredicted RBP12.54□□□□□ -0.4
PNKP-221ENST00000627317 DDOSTP39656 456 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 GSK3AP49840 483 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 MMP15P51511 669 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 FAM3AP98173 230 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 KRTAP1-1Q07627 177 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 TNK1Q13470 666 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 WDR38Q5JTN6 314 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 OR2G6Q5TZ20 316 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 ZCCHC24Q8N2G6 241 aaKnown RBP12.54□□□□□ -0.4
PNKP-221ENST00000627317 OR8G5Q8NG78 346 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 SGCDQ92629 289 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 PPP1R14AQ96A00 147 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 FAM71F1Q96KD3 344 aaPredicted RBP12.54□□□□□ -0.4
PNKP-221ENST00000627317 SORCS2Q96PQ0 1159 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 CCDC90BQ9GZT6 254 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 DUSP21Q9H596 190 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 BARX1Q9HBU1 254 aaPredicted RBP12.54□□□□□ -0.4
PNKP-221ENST00000627317 MSL2Q9HCI7 577 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 ERVK-18Q9QC07 812 aa12.54□□□□□ -0.4
PNKP-221ENST00000627317 A0A096LNT2 108 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 A0A1B0GVI7 797 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 C17orf100A8MU93 164 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 P2RY10O00398 339 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 SPRY3O43610 288 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 LY6G6DO95868 133 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 UBCP0CG48 685 aaKnown RBP12.53□□□□□ -0.4
PNKP-221ENST00000627317 KIR3DL2P43630 455 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 ALKBH1Q13686 389 aaKnown RBP12.53□□□□□ -0.4
PNKP-221ENST00000627317 CLEC12BQ2HXU8 276 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 ODF4Q2M2E3 257 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 PCGF3Q3KNV8 242 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 FDX2Q6P4F2 183 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 KLBQ86Z14 1044 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 PRSS35Q8N3Z0 413 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 CSNK2A3Q8NEV1 391 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 OR13G1Q8NGZ3 307 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 POM121Q96HA1 1249 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 LYZL4Q96KX0 146 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 DIRC2Q96SL1 478 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 MND1Q9BWT6 205 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 TRIM36Q9NQ86 728 aa12.53□□□□□ -0.4
PNKP-221ENST00000627317 NOP16Q9Y3C1 178 aaKnown RBP12.53□□□□□ -0.4
PNKP-221ENST00000627317 LOC107986453A0A1B0GWG9 222 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 ANKRD30BLA7E2S9 258 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 E9PI62 339 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 TPD52L2O43399 206 aaKnown RBP12.52□□□□□ -0.41
PNKP-221ENST00000627317 LILRA1O75019 489 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 MTRF1O75570 445 aaKnown RBP12.52□□□□□ -0.41
PNKP-221ENST00000627317 MT-ND2P03891 347 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 ATP6V1B1P15313 513 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 TNFSF4P23510 183 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 MAP2K3P46734 347 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 TGM4P49221 684 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 CCR9P51686 369 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 WNT4P56705 351 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 NANOS3P60323 173 aaKnown RBP12.52□□□□□ -0.41
PNKP-221ENST00000627317 GABARAPL2P60520 117 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 OR8B8Q15620 311 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 TSTQ16762 297 aaKnown RBP12.52□□□□□ -0.41
PNKP-221ENST00000627317 CLEC9AQ6UXN8 241 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 DOK3Q7L591 496 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 FTMTQ8N4E7 242 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 ZNF676Q8N7Q3 588 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 OR2Z1Q8NG97 314 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 GATAD2BQ8WXI9 593 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 RNF166Q96A37 237 aaPredicted RBP12.52□□□□□ -0.41
PNKP-221ENST00000627317 ELMOD3Q96FG2 381 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 SLC30A2Q9BRI3 323 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 CDCA4Q9BXL8 241 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 YTHDF1Q9BYJ9 559 aaKnown RBP12.52□□□□□ -0.41
PNKP-221ENST00000627317 TMEM100Q9NV29 134 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 FRRS1LQ9P0K9 344 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 ZDHHC8Q9ULC8 765 aa12.52□□□□□ -0.41
PNKP-221ENST00000627317 CSPG4Q6UVK1 2322 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms