RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 OSGIN2Q9Y236 505 aa10.27□□□□□ -0.76
LINC00538-201ENST00000626109 TRAV1-2A0A0B4J238 106 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 A0A0G2JMP0 313 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 A0A0X1KG70 313 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 PRSS29PA6NIE9 313 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 SERPINE3A8MV23 424 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 ACOT7O00154 380 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 ARL6IP5O75915 188 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 LYPD3O95274 346 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 RAB3BP20337 219 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 SLC6A1P30531 599 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 FXYD6P3P58550 94 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 Q0VFX4 171 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 C5orf64Q2M2E5 130 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 ZNF550Q7Z398 422 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 ACBD4Q8NC06 268 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 OR4M2Q8NGB6 313 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 UPRTQ96BW1 309 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 LMF2Q9BU23 707 aaKnown RBP10.27□□□□□ -0.77
LINC00538-201ENST00000626109 BEX2Q9BXY8 128 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 Q9N2J8 555 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 ACOXLQ9NUZ1 547 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 ABRACLQ9P1F3 81 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 RPS6KB2Q9UBS0 482 aa10.27□□□□□ -0.77
LINC00538-201ENST00000626109 SIRT4Q9Y6E7 314 aaPredicted RBP10.27□□□□□ -0.77
LINC00538-201ENST00000626109 PCSK5Q92824 1860 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 AKAP13Q12802 2813 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 A0A0B4J2E0 115 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 LOC102723971A0A1B0GUV8 181 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 A0A1B0GX12 115 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 A0A1W2PNR3 127 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 METTL21EPA6NDL7 271 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 ZNF729A6NN14 1252 aaPredicted RBP10.26□□□□□ -0.77
LINC00538-201ENST00000626109 K7ENP7 123 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 PRKNO60260 465 aaPredicted RBP10.26□□□□□ -0.77
LINC00538-201ENST00000626109 FZD7O75084 574 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 NKX2-2O95096 273 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 ITPKBP27987 946 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 PPICP45877 212 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 KCNJ3P48549 501 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 FLI1Q01543 452 aaPredicted RBP10.26□□□□□ -0.77
LINC00538-201ENST00000626109 ACSM3Q53FZ2 586 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 HSD17B12Q53GQ0 312 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 FIGNL1Q6PIW4 674 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 B3GLCTQ6Y288 498 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 OR51A7Q8NH64 312 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 ABCG5Q9H222 651 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 DPAGT1Q9H3H5 408 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 ADGRL4Q9HBW9 690 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 ING4Q9UNL4 249 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 OR10H1Q9Y4A9 318 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 NPTNQ9Y639 398 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 NCOR2Q9Y618 2525 aa10.26□□□□□ -0.77
LINC00538-201ENST00000626109 CENPVL1A0A0U1RR11 272 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 ZC3H12DA2A288 527 aaKnown RBP10.25□□□□□ -0.77
LINC00538-201ENST00000626109 FRG2CA6NGY1 282 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 SNAI2O43623 268 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 GATBO75879 557 aaKnown RBP10.25□□□□□ -0.77
LINC00538-201ENST00000626109 APOC1P02654 83 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 CD1AP06126 327 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 NR2C1P13056 603 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 ZNF44P15621 663 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 SLC2A5P22732 501 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 NTF4P34130 210 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 MAP3K8P41279 467 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 NR0B1P51843 470 aaKnown RBP10.25□□□□□ -0.77
LINC00538-201ENST00000626109 GNG2P59768 71 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 PSG6Q00889 435 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 RIPPLY1Q0D2K3 151 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 ALKBH1Q13686 389 aaKnown RBP10.25□□□□□ -0.77
LINC00538-201ENST00000626109 NNATQ16517 81 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 DMKNQ6E0U4 476 aaPredicted RBP10.25□□□□□ -0.77
LINC00538-201ENST00000626109 C5orf46Q6UWT4 87 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 CREB3L2Q70SY1 520 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 ZNF767PQ75MW2 155 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 SYS1Q8N2H4 156 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 GALNT16Q8N428 558 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 OR4M1Q8NGD0 313 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 OR2T27Q8NH04 317 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 TRMT10AQ8TBZ6 339 aaKnown RBP10.25□□□□□ -0.77
LINC00538-201ENST00000626109 TIMP4Q99727 224 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 MRPL13Q9BYD1 178 aaKnown RBP10.25□□□□□ -0.77
LINC00538-201ENST00000626109 NXF5Q9H1B4 397 aaKnown RBP10.25□□□□□ -0.77
LINC00538-201ENST00000626109 MED28Q9H204 178 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 PLSCR3Q9NRY6 295 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 NUBP2Q9Y5Y2 271 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 TRAV27A0A087WT01 109 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 GXYLT2A0PJZ3 443 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 ANKRD30BLA7E2S9 258 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 KIAA1324LA8MWY0 1029 aaPredicted RBP10.25□□□□□ -0.77
LINC00538-201ENST00000626109 MCIDASD6RGH6 385 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 SC5DO75845 299 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 UBL3O95164 117 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 NDUFB2O95178 105 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 EIF4EP06730 217 aaKnown RBP10.25□□□□□ -0.77
LINC00538-201ENST00000626109 MRPL3P09001 348 aaKnown RBP10.25□□□□□ -0.77
LINC00538-201ENST00000626109 SLC2A1P11166 492 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 FCGR2AP12318 317 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 PYCR1P32322 319 aa10.25□□□□□ -0.77
LINC00538-201ENST00000626109 MMP15P51511 669 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms