RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 MMP7P09237 267 aaPredicted RBP10.83□□□□□ -0.68
PNKP-217ENST00000625216 H2BFMP0C1H6 154 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 DAOP14920 347 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 ZNF32P17041 273 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 GIFP27352 417 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 GABRA5P31644 462 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 CRYBB2P43320 205 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 RAD52P43351 418 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 GDI2P50395 445 aaKnown RBP10.83□□□□□ -0.68
PNKP-217ENST00000625216 SELENOVP59797 346 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 NCS1P62166 190 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 LSM3P62310 102 aaKnown RBP10.83□□□□□ -0.68
PNKP-217ENST00000625216 SLC3A1Q07837 685 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 ALKBH1Q13686 389 aaKnown RBP10.83□□□□□ -0.68
PNKP-217ENST00000625216 CNPY1Q3B7I2 92 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 WDR38Q5JTN6 314 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 FDX2Q6P4F2 183 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 RPL22L1Q6P5R6 122 aaKnown RBP10.83□□□□□ -0.68
PNKP-217ENST00000625216 PRIMA1Q86XR5 153 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 EGFL6Q8IUX8 553 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 OR13C5Q8NGS8 318 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 RGP1Q92546 391 aaPredicted RBP10.83□□□□□ -0.68
PNKP-217ENST00000625216 TMEM203Q969S6 136 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 SMIM19Q96E16 107 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 C4orf45Q96LM5 186 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 CHCHD6Q9BRQ6 235 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 MROQ9BYG7 248 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 MRPL37Q9BZE1 423 aaKnown RBP10.83□□□□□ -0.68
PNKP-217ENST00000625216 CDH20Q9HBT6 801 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 DDX28Q9NUL7 540 aaKnown RBP10.83□□□□□ -0.68
PNKP-217ENST00000625216 TMEM160Q9NX00 188 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 GPR160Q9UJ42 338 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 STUB1Q9UNE7 303 aa10.83□□□□□ -0.68
PNKP-217ENST00000625216 SONP18583 2426 aaKnown RBP10.83□□□□□ -0.68
PNKP-217ENST00000625216 ARFGEF3Q5TH69 2177 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 ZNF254O75437 659 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 TACSTD2P09758 323 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 ANOS1P23352 680 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 VBP1P61758 197 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 FABP5Q01469 135 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 MRPL28Q13084 256 aaKnown RBP10.82□□□□□ -0.68
PNKP-217ENST00000625216 GPR50Q13585 617 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 INSL4Q14641 139 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 SPCS2Q15005 226 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 CARTPTQ16568 116 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 TBC1D28Q2M2D7 210 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 CCDC58Q4VC31 144 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 CD200R1LQ6Q8B3 271 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 DEGS2Q6QHC5 323 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 UNQ6126/PRO20091Q6UXV3 157 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 PRSS35Q8N3Z0 413 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 OR2G2Q8NGZ5 317 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 UBASH3BQ8TF42 649 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 PDCD1LG2Q9BQ51 273 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 BCL7BQ9BQE9 202 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 CENPOQ9BU64 300 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 TMED9Q9BVK6 235 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 BCL2L14Q9BZR8 327 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 WNT5BQ9H1J7 359 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 FAM206AQ9NX38 181 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 FRRS1LQ9P0K9 344 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 CDC42EP3Q9UKI2 254 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 R4GMQ9 66 aa10.82□□□□□ -0.68
PNKP-217ENST00000625216 TRBV2A0A0J9YWF9 115 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 LOC100506127A0A0U1RQW1 187 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 OR4C45A6NMZ5 311 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 GABRPO00591 440 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 DOK2O60496 412 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 IFNA2P01563 188 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 CD1AP06126 327 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 IGHV4-31P0DP07 118 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 APLNRP35414 380 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 UCP2P55851 309 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 PSMA6P60900 246 aaKnown RBP10.81□□□□□ -0.68
PNKP-217ENST00000625216 PCBD1P61457 104 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 SCRN3Q0VDG4 424 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 MOGQ16653 247 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 MSMPQ1L6U9 139 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 TIMM50Q3ZCQ8 353 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 CHRFAM7AQ494W8 412 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 ELFN2Q5R3F8 820 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 RGS7BPQ6MZT1 257 aaPredicted RBP10.81□□□□□ -0.68
PNKP-217ENST00000625216 ZNF774Q6NX45 483 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 SYT9Q86SS6 491 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 CATSPERDQ86XM0 798 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 C1orf174Q8IYL3 243 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 ALDH16A1Q8IZ83 802 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 ZCCHC24Q8N2G6 241 aaKnown RBP10.81□□□□□ -0.68
PNKP-217ENST00000625216 GJC3Q8NFK1 279 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 AKR7LQ8NHP1 331 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 NDNFQ8TB73 568 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 HAVCR2Q8TDQ0 301 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 PPP1R14AQ96A00 147 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 ATF6BQ99941 703 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 WACQ9BTA9 647 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 OR2H1Q9GZK4 316 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 BPESC1Q9GZL8 116 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 EXOSC4Q9NPD3 245 aaKnown RBP10.81□□□□□ -0.68
PNKP-217ENST00000625216 G6PC2Q9NQR9 355 aa10.81□□□□□ -0.68
PNKP-217ENST00000625216 PLEK2Q9NYT0 353 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms