RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 ARRDC1Q8N5I2 433 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 OR4K17Q8NGC6 315 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 NUDCD2Q8WVJ2 157 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 TMED6Q8WW62 240 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 ADIPOR1Q96A54 375 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 S100PBPQ96BU1 408 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 CMBLQ96DG6 245 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 CNTD2Q9H8S5 307 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 G6PC2Q9NQR9 355 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 CENPMQ9NSP4 180 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 MMACHCQ9Y4U1 282 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 PCDHGA1Q9Y5H4 931 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 KNTC1P50748 2209 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 C13orf42A0A1B0GVH6 325 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 A0A1B0GWJ7 208 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 A0A1W2PQD3 144 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 P2RY10O00398 339 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 NPIPB7O75200 414 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 SRSF10O75494 262 aaKnown RBP7.75□□□□□ -1.17
VCL-207ENST00000624354 SCGNO76038 276 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 DUS4LO95620 317 aaKnown RBP7.75□□□□□ -1.17
VCL-207ENST00000624354 IGKV3-11P04433 115 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 PGAM2P15259 253 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 S100A2P29034 98 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 HRH1P35367 487 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 GLP1RP43220 463 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 CAPZBP47756 277 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 SLC26A5P58743 744 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 MRPS21P82921 87 aaKnown RBP7.75□□□□□ -1.17
VCL-207ENST00000624354 PLCXD2Q0VAA5 305 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 REC114Q7Z4M0 266 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 TSLPQ969D9 159 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 PIK3IP1Q96FE7 263 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 LANCL2Q9NS86 450 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 PPP1R14DQ9NXH3 145 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 WDFY3Q8IZQ1 3526 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 EFSO43281 561 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 LMX1BO60663 402 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 IGHMP01871 453 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 CRHP06850 196 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 H2BFMP0C1H6 154 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 NME1P15531 152 aaKnown RBP7.75□□□□□ -1.17
VCL-207ENST00000624354 TBPP20226 339 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 RAB5AP20339 215 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 CYCSP99999 105 aaKnown RBP7.75□□□□□ -1.17
VCL-207ENST00000624354 ZP2Q05996 745 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 ADAM5Q6NVV9 412 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 DEGS2Q6QHC5 323 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 LYPD6Q86Y78 171 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 LINC00346Q8IVM7 164 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 DTWD2Q8NBA8 298 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 NUBPLQ8TB37 319 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 DCUN1D4Q92564 292 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 MRGPRFQ96AM1 343 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 FGGYQ96C11 551 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 CDCA3Q99618 268 aaPredicted RBP7.75□□□□□ -1.17
VCL-207ENST00000624354 OR11A1Q9GZK7 315 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 PDE7BQ9NP56 450 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 CSAG2Q9Y5P2 127 aa7.75□□□□□ -1.17
VCL-207ENST00000624354 WISP1O95388 367 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 IGHV4-34P06331 123 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 GABRG2P18507 467 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 HSD11B1P28845 292 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 PMELP40967 661 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 GABRA4P48169 554 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 CAV2P51636 162 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 OR2B8PP59922 312 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 EBPQ15125 230 aaKnown RBP7.74□□□□□ -1.17
VCL-207ENST00000624354 SLC22A6Q4U2R8 563 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 PYY3Q5JQD4 70 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 TTLL10Q6ZVT0 673 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 GRINAQ7Z429 371 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 KDM8Q8N371 416 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 SLC22A24Q8N4F4 322 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 DEFB119Q8N690 84 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 ADAD2Q8NCV1 583 aaKnown RBP7.74□□□□□ -1.17
VCL-207ENST00000624354 SLC26A10Q8NG04 563 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 ZNF721Q8TF20 911 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 hCG_1809904A0A1W2PP81 198 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 A0A1W2PR64 198 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 A0A1W2PRV1 198 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 WIPF3A6NGB9 483 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 A6NIZ1 184 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 DDAH2O95865 285 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 SNRNP70P08621 437 aaKnown RBP7.74□□□□□ -1.17
VCL-207ENST00000624354 DRD1P21728 446 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 SERPINF1P36955 418 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 OR1D4P47884 311 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 TAS2R31P59538 309 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 RAP1BP61224 184 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 RAP1AP62834 184 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 TGIF1Q15583 401 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 PAQR4Q8N4S7 273 aaPredicted RBP7.74□□□□□ -1.17
VCL-207ENST00000624354 SLC30A7Q8NEW0 376 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 NECAB3Q96P71 396 aaPredicted RBP7.74□□□□□ -1.17
VCL-207ENST00000624354 SELENOIQ9C0D9 397 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 NUP210LQ5VU65 1888 aa7.74□□□□□ -1.17
VCL-207ENST00000624354 A0A0B4J2A0 478 aa7.73□□□□□ -1.17
VCL-207ENST00000624354 TEX13DA0A0J9YY54 714 aaPredicted RBP7.73□□□□□ -1.17
VCL-207ENST00000624354 A0A1W2PPH5 198 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms