RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 SSBP1Q04837 148 aaKnown RBP11.46□□□□□ -0.58
MSH6-215ENST00000622629 MRPL49Q13405 166 aaKnown RBP11.46□□□□□ -0.58
MSH6-215ENST00000622629 EXT1Q16394 746 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 LINC01590Q5TEZ4 76 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 OR5L1Q8NGL2 311 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 NINJ1Q92982 152 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 ARHGAP5-AS1Q96IT6 56 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 SLC17A5Q9NRA2 495 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 ZFP57Q9NU63 452 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 ZNF230Q9UIE0 474 aaPredicted RBP11.46□□□□□ -0.58
MSH6-215ENST00000622629 ZNF175Q9Y473 711 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 ANAPC1Q9H1A4 1944 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 PHF1O43189 567 aaPredicted RBP11.46□□□□□ -0.58
MSH6-215ENST00000622629 CER1O95813 267 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 IL11P20809 199 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 DEGS2Q6QHC5 323 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 TRILQ7L0X0 811 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 LRRTM1Q86UE6 522 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 SEH1LQ96EE3 360 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 SPIN2AQ99865 258 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 SPIN2BQ9BPZ2 258 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 PBDC1Q9BVG4 233 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 BOKQ9UMX3 212 aaPredicted RBP11.46□□□□□ -0.58
MSH6-215ENST00000622629 HDGFL3Q9Y3E1 203 aa11.46□□□□□ -0.58
MSH6-215ENST00000622629 ATP6V1G2-DDX39BF2Z307 99 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 ICAM2P13598 275 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 UBE2NP61088 152 aaKnown RBP11.45□□□□□ -0.58
MSH6-215ENST00000622629 RHBDD2Q6NTF9 364 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 C11orf87Q6NUJ2 197 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 H3F3CQ6NXT2 135 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 KIF25Q9UIL4 384 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 SLCO1B1Q9Y6L6 691 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 TRAPPC2LH3BP13 241 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 TNFSF11O14788 317 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 SNAPINO95295 136 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 B4GALT1P15291 398 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 RAB5BP61020 215 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 EFNB1P98172 346 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 IKZF1Q13422 519 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 CLINT1Q14677 625 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 HLA-BQ31612 363 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 AKR7LQ8NHP1 331 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 MCHR2Q969V1 340 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 A0A0G2JK05 382 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 FTCDNL1E5RQL4 147 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 CPN1P15169 458 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 CYB561P49447 251 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 RBP2P50120 134 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 SCAND1P57086 179 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 KCNRGQ8N5I3 272 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 OR4D6Q8NGJ1 314 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 OR1S1Q8NH92 325 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 SULT4A1Q9BR01 284 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 RIF1Q5UIP0 2472 aaKnown RBP11.45□□□□□ -0.58
MSH6-215ENST00000622629 SCN8AQ9UQD0 1980 aa11.45□□□□□ -0.58
MSH6-215ENST00000622629 IFNA2P01563 188 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 SHBQ15464 509 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 AKR1C8PQ5T2L2 129 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 TMEM88Q6PEY1 159 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 FIP1L1Q6UN15 594 aaKnown RBP11.44□□□□□ -0.58
MSH6-215ENST00000622629 BAP18Q8IXM2 172 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 D2HGDHQ8N465 521 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 ANGPTL6Q8NI99 470 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 ROBO4Q8WZ75 1007 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 CXorf58Q96LI9 332 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 PIGMQ9H3S5 423 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 FREM3P0C091 2139 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 ZNF354AO60765 605 aaPredicted RBP11.44□□□□□ -0.58
MSH6-215ENST00000622629 CFDP00746 253 aaPredicted RBP11.44□□□□□ -0.58
MSH6-215ENST00000622629 GSTP1P09211 210 aaKnown RBP11.44□□□□□ -0.58
MSH6-215ENST00000622629 APLNRP35414 380 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 OR3A4PP47883 348 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 PDCD1Q15116 288 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 GPR157Q5UAW9 335 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 LIN37Q96GY3 246 aaPredicted RBP11.44□□□□□ -0.58
MSH6-215ENST00000622629 ANKRD30BLA7E2S9 258 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 FAM166BA8MTA8 275 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 KISS1Q15726 138 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.44□□□□□ -0.58
MSH6-215ENST00000622629 SLC38A9Q8NBW4 561 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 GLYATL2Q8WU03 294 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 DOCK8Q8NF50 2099 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 A0A096LPE4 126 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 A0A1W2PPZ6 126 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 A0A1W2PQD3 144 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 NXPH3O95157 252 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 OR5H8P0DN80 308 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 FKBP2P26885 142 aaKnown RBP11.44□□□□□ -0.58
MSH6-215ENST00000622629 TMEM128Q5BJH2 165 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 ATPAF1Q5TC12 328 aaPredicted RBP11.44□□□□□ -0.58
MSH6-215ENST00000622629 CATSPERDQ86XM0 798 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 OR2AE1Q8NHA4 323 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 ASB10Q8WXI3 467 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 PSMF1Q92530 271 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 GPX7Q96SL4 187 aaPredicted RBP11.44□□□□□ -0.58
MSH6-215ENST00000622629 ZNF416Q9BWM5 594 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 DNTTIP1Q9H147 329 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 SLC25A32Q9H2D1 315 aa11.44□□□□□ -0.58
MSH6-215ENST00000622629 MRPS18BQ9Y676 258 aaKnown RBP11.44□□□□□ -0.58
MSH6-215ENST00000622629 SPRY1O43609 319 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms