RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 PON3Q15166 354 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 TEX30Q5JUR7 227 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 CCNJQ5T5M9 372 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 PLA2G4DQ86XP0 818 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ZNF547Q8IVP9 402 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 RIMKLAQ8IXN7 391 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 PUSL1Q8N0Z8 303 aaKnown RBP2.76□□□□□ -1.97
BRCA1-229ENST00000621897 KIR2DL5AQ8N109 375 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 MDS2Q8NDY4 140 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 OR51D1Q8NGF3 324 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 OR9A4Q8NGU2 314 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 OR51F2Q8NH61 342 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 KIR2DL5BQ8NHK3 375 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 MCOLN3Q8TDD5 553 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 MRPS31Q92665 395 aaKnown RBP2.76□□□□□ -1.97
BRCA1-229ENST00000621897 DGCR14Q96DF8 476 aaKnown RBP2.76□□□□□ -1.97
BRCA1-229ENST00000621897 RMND5BQ96G75 393 aaPredicted RBP2.76□□□□□ -1.97
BRCA1-229ENST00000621897 Q96MT0 163 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 PLEKHF1Q96S99 279 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 EBF4Q9BQW3 602 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 DDA1Q9BW61 102 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 FAIM2Q9BWQ8 316 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 TLNRD1Q9H1K6 362 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 OR51B5Q9H339 312 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 MFSD1Q9H3U5 465 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 REEP4Q9H6H4 257 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ZDHHC4Q9NPG8 344 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ACP6Q9NPH0 428 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ISYNA1Q9NPH2 558 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 XPNPEP1Q9NQW7 623 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 SLC2A9Q9NRM0 540 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 MCUBQ9NWR8 336 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 SDHAF2Q9NX18 166 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 WRAP73Q9P2S5 460 aaPredicted RBP2.76□□□□□ -1.97
BRCA1-229ENST00000621897 GINS2Q9Y248 185 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ARL2BPQ9Y2Y0 163 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ACOT9Q9Y305 439 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ARHGAP23Q9P227 1491 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ZFYVE9O95405 1425 aa2.76□□□□□ -1.97
BRCA1-229ENST00000621897 ZNFX1Q9P2E3 1918 aaKnown RBP2.76□□□□□ -1.97
BRCA1-229ENST00000621897 MTUS2Q5JR59 1369 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 ABCC11Q96J66 1382 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 TRAV8-7A0A075B6U6 113 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 OR5B21A6NL26 309 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 HACD1B0YJ81 288 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 F5H768 121 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 J3QLI3 93 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 MRPS12O15235 138 aaKnown RBP2.75□□□□□ -1.97
BRCA1-229ENST00000621897 CDC40O60508 579 aaKnown RBP eCLIP2.75□□□□□ -1.97
BRCA1-229ENST00000621897 UGT1A9O60656 530 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 SHOX2O60902 331 aaPredicted RBP2.75□□□□□ -1.97
BRCA1-229ENST00000621897 CTNSO60931 367 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 RAB36O95755 333 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 OXTP01178 125 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 HBE1P02100 147 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 FGF1P05230 155 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 RNH1P13489 461 aaKnown RBP2.75□□□□□ -1.97
BRCA1-229ENST00000621897 GFAPP14136 432 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 CELP19835 753 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 FUT3P21217 361 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 ATP6V1B2P21281 511 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 IL12AP29459 219 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 GNRHRP30968 328 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 GABRA4P48169 554 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 SSR4P51571 173 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 HNRNPA3P51991 378 aaKnown RBP2.75□□□□□ -1.97
BRCA1-229ENST00000621897 STC1P52823 247 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 TMEM33P57088 247 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 PSME3P61289 254 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 RANP62826 216 aaKnown RBP2.75□□□□□ -1.97
BRCA1-229ENST00000621897 HMGCS1Q01581 520 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 TLE4Q04727 773 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 TNFRSF9Q07011 255 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 UNC119Q13432 240 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 OR5I1Q13606 314 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 EIF2B1Q14232 305 aaKnown RBP2.75□□□□□ -1.97
BRCA1-229ENST00000621897 ARL6IP1Q15041 203 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 OXA1LQ15070 435 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 RAB35Q15286 201 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 TAF1AQ15573 450 aaPredicted RBP2.75□□□□□ -1.97
BRCA1-229ENST00000621897 NDUFA5Q16718 116 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 CARD16Q5EG05 197 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 HACD4Q5VWC8 232 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 MEDAGQ5VYS4 303 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 SAXO2Q658L1 398 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 OR8G2PQ6IF36 304 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 FAM45BPQ6NSW5 357 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 CD200R1LQ6Q8B3 271 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 Q6ZT83 130 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 LHFPL3Q86UP9 236 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 PHF13Q86YI8 300 aaPredicted RBP2.75□□□□□ -1.97
BRCA1-229ENST00000621897 WDFY1Q8IWB7 410 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 BBS7Q8IWZ6 715 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 PRSS58Q8IYP2 241 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 OR2AE1Q8NHA4 323 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 FAM45AQ8TCE6 357 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 ACTRT1Q8TDG2 376 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 BLOC1S5Q8TDH9 187 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 IL1F10Q8WWZ1 152 aa2.75□□□□□ -1.97
BRCA1-229ENST00000621897 LZICQ8WZA0 190 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms