RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 ZNF823P16415 610 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 SPI1P17947 270 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 MAGEA2P43356 314 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 KRTAP10-3P60369 221 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 CSNK2BP67870 215 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 PCK2Q16822 640 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 LINC01590Q5TEZ4 76 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 SHISA2Q6UWI4 295 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 FAM90A1Q86YD7 464 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 C11orf53Q8IXP5 236 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 C1orf87Q8N0U7 546 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 IQCF1Q8N6M8 205 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 OR11L1Q8NGX0 322 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 SPTSSAQ969W0 71 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 SLC25A28Q96A46 364 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 SLAMF6Q96DU3 332 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 PLEKHA8Q96JA3 519 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 COPS4Q9BT78 406 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 TSSK6Q9BXA6 273 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 CHIAQ9BZP6 476 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 FGF23Q9GZV9 251 aaPredicted RBP9.47□□□□□ -0.89
CPNE3-210ENST00000621245 ZMAT3Q9HA38 289 aaKnown RBP9.47□□□□□ -0.89
CPNE3-210ENST00000621245 CENPMQ9NSP4 180 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 TAS2R1Q9NYW7 299 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 IL20Q9NYY1 176 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 ZNF319Q9P2F9 582 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 RNF7Q9UBF6 113 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 KCNG2Q9UJ96 466 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 U3KQV3 271 aa9.47□□□□□ -0.89
CPNE3-210ENST00000621245 DNAH9Q9NYC9 4486 aa9.46□□□□□ -0.89
CPNE3-210ENST00000621245 CENPVL3A0A0U1RRI6 287 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 DHRS12A0PJE2 317 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 FAM181BA6NEQ2 426 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 GGT3PA6NGU5 568 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 FAM183AA6NL82 134 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.46□□□□□ -0.9
CPNE3-210ENST00000621245 LGALS8O00214 317 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 MELTFP08582 738 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 SELLP14151 372 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 IFNGR2P38484 337 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 ENTPD1P49961 510 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 HMGA2P52926 109 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 MS4A2Q01362 244 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 OR8B8Q15620 311 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 DRAM2Q6UX65 266 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 RASSF6Q6ZTQ3 369 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 NLRC3Q7RTR2 1065 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 PIGWQ7Z7B1 504 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 PDZD9Q8IXQ8 264 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 OR52L1Q8NGH7 329 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 OR2T4Q8NH00 348 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 TMIGD2Q96BF3 282 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 SIRPDQ9H106 197 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 SEMA6AQ9H2E6 1030 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 PRDM13Q9H4Q3 707 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 ZNF696Q9H7X3 374 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 FN3KRPQ9HA64 309 aa9.46□□□□□ -0.9
CPNE3-210ENST00000621245 hCG_2014768A0A024R1R8 64 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 OOEPA6NGQ2 149 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 A6NLC8 198 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 SRRM5B3KS81 715 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 ZNF879B4DU55 563 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 ZNF593O00488 134 aaPredicted RBP9.45□□□□□ -0.9
CPNE3-210ENST00000621245 ENSAO43768 121 aaKnown RBP9.45□□□□□ -0.9
CPNE3-210ENST00000621245 CCNB2O95067 398 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 LHBP01229 141 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 AMY2BP19961 511 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 MTNR1AP48039 350 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 CX3CR1P49238 355 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 GNGT1P63211 74 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 FAM3AP98173 230 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 FIP1L1Q6UN15 594 aaKnown RBP9.45□□□□□ -0.9
CPNE3-210ENST00000621245 SLC16A9Q7RTY1 509 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 PRSS45Q7RTY3 260 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 CPLX4Q7Z7G2 160 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 TMEM179BQ7Z7N9 219 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 KIR3DL3Q8N743 410 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 OR6K6Q8NGW6 343 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 SPSB4Q96A44 273 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 SGK3Q96BR1 496 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 WDFY2Q96P53 400 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 KCNJ15Q99712 375 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 NIPSNAP1Q9BPW8 284 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 TRIM15Q9C019 465 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 C1RLQ9NZP8 487 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 DNAJC27Q9NZQ0 273 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 MRPL15Q9P015 296 aaKnown RBP9.45□□□□□ -0.9
CPNE3-210ENST00000621245 ACTR3BQ9P1U1 418 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 KLHDC2Q9Y2U9 406 aa9.45□□□□□ -0.9
CPNE3-210ENST00000621245 A0A0U1RQK1 487 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 hCG_38984A0A1B0GV85 526 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 hCG_1807616A0A1W2PRN6 198 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 ZNF878C9JN71 531 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 DVL1O14640 695 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 TBX1O43435 398 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 GMDSO60547 372 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 TOX4O94842 621 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 IGHV4-59P01825 116 aa9.44□□□□□ -0.9
CPNE3-210ENST00000621245 ANXA2P07355 339 aaKnown RBP9.44□□□□□ -0.9
CPNE3-210ENST00000621245 CPT2P23786 658 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms