RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 RPA2P15927 270 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 HTR1DP28221 377 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 CD200P41217 278 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 PPP1CAP62136 330 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 LTC4SQ16873 150 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 MIDNQ504T8 468 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 FAHD2BQ6P2I3 314 aaPredicted RBP6.52□□□□□ -1.37
COLCA1-205ENST00000620864 AAED1Q7RTV5 226 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM251Q8N6I4 163 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 OR5AR1Q8NGP9 310 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 FAHD2AQ96GK7 314 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 POM121L2Q96KW2 1035 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 CDK5RAP2Q96SN8 1893 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 SMIM18P0DKX4 95 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 NID1P14543 1247 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 ARRB2P32121 409 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 RACK1P63244 317 aaKnown RBP6.52□□□□□ -1.37
COLCA1-205ENST00000620864 SMN1Q16637 294 aaKnown RBP6.52□□□□□ -1.37
COLCA1-205ENST00000620864 DHRS7BQ6IAN0 325 aaPredicted RBP6.52□□□□□ -1.37
COLCA1-205ENST00000620864 CHST14Q8NCH0 376 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 OR2T10Q8NGZ9 312 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 LHFPL5Q8TAF8 219 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 OLIG1Q8TAK6 271 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 EPHX3Q9H6B9 360 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 SLC25A19Q9HC21 320 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 ZFP30Q9Y2G7 519 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 IFITM5A6NNB3 132 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 C2CD4DB7Z1M9 353 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 OR5G3P0C626 314 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 SLC6A12P48065 614 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 CLEC12BQ2HXU8 276 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 TRAT1Q6PIZ9 186 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM207Q6UWW9 146 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 SLC16A13Q7RTY0 426 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 ZNF384Q8TF68 577 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 ASB11Q8WXH4 323 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 PKIBQ9C010 78 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 LRRC37A3O60309 1634 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 DICER1Q9UPY3 1922 aaKnown RBP6.52□□□□□ -1.37
COLCA1-205ENST00000620864 MAP1LC3B2A6NCE7 125 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 XRCC2O43543 280 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 QDPRP09417 244 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 FPR2P25090 351 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 CTSSP25774 331 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 PIGAP37287 484 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 UNQ6494/PRO21346Q6UXR6 183 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 SCAMP4Q969E2 229 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 NEIL2Q969S2 332 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 NMNAT3Q96T66 252 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 PMCHL2Q9BQD1 86 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 PTDSS2Q9BVG9 487 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 MAP1LC3BQ9GZQ8 125 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 CLEC18AA5D8T8 446 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 GCGP01275 180 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 BCL3P20749 454 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 S100A4P26447 101 aaKnown RBP6.52□□□□□ -1.37
COLCA1-205ENST00000620864 PRLHRP49683 370 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 CLDN12P56749 244 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 IL13RA2Q14627 380 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 MRM1Q6IN84 353 aaKnown RBP6.52□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM64Q6YI46 380 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 VRK2Q86Y07 508 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 CLEC18CQ8NCF0 446 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 OR5D13Q8NGL4 314 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 SLC23A1Q9UHI7 598 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 PPP1R3CQ9UQK1 317 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 NHSL1Q5SYE7 1610 aa6.52□□□□□ -1.37
COLCA1-205ENST00000620864 GPX2P18283 190 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 CD38P28907 300 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 PLP1P60201 277 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 ISL1P61371 349 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM268Q5VZI3 342 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 SCGB1D4Q6XE38 83 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 OPALINQ96PE5 141 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 OR5M11Q96RB7 305 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 DMRTA2Q96SC8 542 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 DUSP21Q9H596 190 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 FOXJ3Q9UPW0 622 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 ICE1Q9Y2F5 2266 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 RHBDL1O75783 438 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 OR2J3O76001 311 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 DUS4LO95620 317 aaKnown RBP6.51□□□□□ -1.37
COLCA1-205ENST00000620864 PCSK6P29122 969 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 HAAOP46952 286 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 RHOBP62745 196 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 SYT14P1Q58G82 188 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 YOD1Q5VVQ6 348 aaPredicted RBP6.51□□□□□ -1.37
COLCA1-205ENST00000620864 ZNF793Q6ZN11 406 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 OR10A7Q8NGE5 316 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 OR1L4Q8NGR5 311 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 GPX7Q96SL4 187 aaPredicted RBP6.51□□□□□ -1.37
COLCA1-205ENST00000620864 ATOH8Q96SQ7 321 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 CSNK1G1Q9HCP0 422 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM167BQ9NRX6 74 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 DUSP13Q9UII6 198 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 RAB29O14966 203 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 GP1BAP07359 652 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 PGA4P0DJD7 388 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 PGA5P0DJD9 388 aa6.51□□□□□ -1.37
COLCA1-205ENST00000620864 ARR3P36575 388 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms