RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 REEP6Q96HR9 211 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 ZNF649Q9BS31 505 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 TLNRD1Q9H1K6 362 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 OR10A2Q9H208 303 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 G6PC2Q9NQR9 355 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 SMPD3Q9NY59 655 aaPredicted RBP6.95□□□□□ -1.3
NEK3-209ENST00000618856 DNAJC27Q9NZQ0 273 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 H2AFY2Q9P0M6 372 aaPredicted RBP6.95□□□□□ -1.3
NEK3-209ENST00000618856 NUFIP1Q9UHK0 495 aaKnown RBP6.95□□□□□ -1.3
NEK3-209ENST00000618856 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.95□□□□□ -1.3
NEK3-209ENST00000618856 PPP1R3CQ9UQK1 317 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 NOP16Q9Y3C1 178 aaKnown RBP6.95□□□□□ -1.3
NEK3-209ENST00000618856 NPTNQ9Y639 398 aa6.95□□□□□ -1.3
NEK3-209ENST00000618856 A0A1B0GTI1 187 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 TMEM269A0A1B0GVZ9 245 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 A0A1W2PQL4 384 aaPredicted RBP6.94□□□□□ -1.3
NEK3-209ENST00000618856 GGT3PA6NGU5 568 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 A8MV72 311 aaPredicted RBP6.94□□□□□ -1.3
NEK3-209ENST00000618856 FAM157AC9JC47 383 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 ANKRD65E5RJM6 399 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 ZNF670-ZNF695F2Z2N8 137 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 F5H0A9 414 aaPredicted RBP6.94□□□□□ -1.3
NEK3-209ENST00000618856 TNFRSF13BO14836 293 aaPredicted RBP6.94□□□□□ -1.3
NEK3-209ENST00000618856 MPZL2O60487 215 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 CRLF1O75462 422 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 BAG2O95816 211 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 IGHV2-5P01817 119 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 TTRP02766 147 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 ATP6V1B1P15313 513 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 CCL1P22362 96 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 CA6P23280 308 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 MTNR1AP48039 350 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 RIDAP52758 137 aaKnown RBP6.94□□□□□ -1.3
NEK3-209ENST00000618856 DVL1P1P54792 670 aaPredicted RBP6.94□□□□□ -1.3
NEK3-209ENST00000618856 CXCR4P61073 352 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 ADARB1P78563 741 aaKnown RBP6.94□□□□□ -1.3
NEK3-209ENST00000618856 ZNF85Q03923 595 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 HNRNPA0Q13151 305 aaKnown RBP6.94□□□□□ -1.3
NEK3-209ENST00000618856 RCN1Q15293 331 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 TIGD6Q17RP2 521 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 ZBTB37Q5TC79 503 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 LPCAT4Q643R3 524 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 C11orf53Q8IXP5 236 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 ELMOD2Q8IZ81 293 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 LINC01356Q8N9X3 169 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 CSNK2A3Q8NEV1 391 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 SPRYD4Q8WW59 207 aaPredicted RBP6.94□□□□□ -1.3
NEK3-209ENST00000618856 ITPKCQ96DU7 683 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 PGAM5Q96HS1 289 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 APOL4Q9BPW4 351 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 PBOV1Q9GZY1 135 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 ZNF665Q9H7R5 613 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 MOB1AQ9H8S9 216 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 IMPAD1Q9NX62 359 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 TREM2Q9NZC2 230 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 POLR3KQ9Y2Y1 108 aaPredicted RBP6.94□□□□□ -1.3
NEK3-209ENST00000618856 GMPPBQ9Y5P6 360 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 R4GMQ9 66 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 DYSFO75923 2080 aa6.94□□□□□ -1.3
NEK3-209ENST00000618856 METTL15A6NJ78 407 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 DHRS7CA6NNS2 312 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 B4DSR2 109 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 PSMD9O00233 223 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 MAGEB4O15481 346 aaPredicted RBP6.93□□□□□ -1.3
NEK3-209ENST00000618856 TPD52L2O43399 206 aaKnown RBP6.93□□□□□ -1.3
NEK3-209ENST00000618856 TBX1O43435 398 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 WBP4O75554 376 aaKnown RBP6.93□□□□□ -1.3
NEK3-209ENST00000618856 LHBP01229 141 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 IGHA1P01876 353 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 DBTP11182 482 aaKnown RBP6.93□□□□□ -1.3
NEK3-209ENST00000618856 ZNF16P17020 682 aaPredicted RBP6.93□□□□□ -1.3
NEK3-209ENST00000618856 PEX2P28328 305 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 CFHR2P36980 270 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 RBMXP38159 391 aaKnown RBP6.93□□□□□ -1.3
NEK3-209ENST00000618856 BTG1P62324 171 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 ACTC1P68032 377 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 ACTA1P68133 377 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 ELF3P78545 371 aaPredicted RBP6.93□□□□□ -1.3
NEK3-209ENST00000618856 MVKQ03426 396 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 MFGE8Q08431 387 aaPredicted RBP6.93□□□□□ -1.3
NEK3-209ENST00000618856 ZMYND11Q15326 602 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 OR8G1Q15617 311 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 MPPED2Q15777 294 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 SNCBQ16143 134 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 ZNF829Q3KNS6 432 aaPredicted RBP6.93□□□□□ -1.3
NEK3-209ENST00000618856 CDONQ4KMG0 1287 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 AVPI1Q5T686 147 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 ZNF691Q5VV52 312 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 LIPNQ5VXI9 398 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 TMEM42Q69YG0 159 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 FAM166AQ6J272 317 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 FDX2Q6P4F2 183 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 WDR86Q86TI4 376 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 CATSPERDQ86XM0 798 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 GALNT4Q8N4A0 578 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 ZNF420Q8TAQ5 688 aaPredicted RBP6.93□□□□□ -1.3
NEK3-209ENST00000618856 FBLIM1Q8WUP2 373 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 OR5P3Q8WZ94 311 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 RORBQ92753 470 aa6.93□□□□□ -1.3
NEK3-209ENST00000618856 PPP1R14AQ96A00 147 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms