RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.66□□□□□ -1.82
SNCA-213ENST00000618500 SATL1Q86VE3 508 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 ZDHHC23Q8IYP9 409 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 OR6T1Q8NGN1 323 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 MOSPD2Q8NHP6 518 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 TMEM239Q8WW34 195 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 EAF1Q96JC9 268 aaPredicted RBP3.66□□□□□ -1.82
SNCA-213ENST00000618500 LRGUKQ96M69 825 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 SP140LQ9H930 580 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 CHCHD3Q9NX63 227 aaKnown RBP3.66□□□□□ -1.82
SNCA-213ENST00000618500 SLC25A37Q9NYZ2 338 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 USE1Q9NZ43 259 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 SLC17A7Q9P2U7 560 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 MED31Q9Y3C7 131 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 LYVE1Q9Y5Y7 322 aa3.66□□□□□ -1.82
SNCA-213ENST00000618500 CD300LBA8K4G0 201 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 XRCC2O43543 280 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 CFL1P23528 166 aaKnown RBP3.65□□□□□ -1.82
SNCA-213ENST00000618500 CTXN1P60606 82 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 IL5RAQ01344 420 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 CD47Q08722 323 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 KLRD1Q13241 179 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 SEC23BQ15437 767 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 FAM76BQ5HYJ3 339 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 FAM201AQ5SY85 155 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 SLC18B1Q6NT16 456 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 DRAM2Q6UX65 266 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 WDR82Q6UXN9 313 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 THAP5Q7Z6K1 395 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 OR5AS1Q8N127 324 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 ANGPTL6Q8NI99 470 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 AKR1E2Q96JD6 320 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 TENM3Q9P273 2699 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 LHFPL6Q9Y693 200 aa3.65□□□□□ -1.82
SNCA-213ENST00000618500 OOSP1A8MZH6 123 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 ACOT8O14734 319 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 LDLRAD4O15165 306 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 SNNO75324 88 aaPredicted RBP3.65□□□□□ -1.83
SNCA-213ENST00000618500 RHBDL1O75783 438 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 OR2F2O95006 317 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 CRABP1P29762 137 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 SDHAP31040 664 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 SLC1A6P48664 564 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 FHL3Q13643 280 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 MPPED2Q15777 294 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 LCN1P1Q5VSP4 162 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 TMPRSS11FQ6ZWK6 438 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 ZBTB46Q86UZ6 589 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 THNSL2Q86YJ6 484 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 DPP10Q8N608 796 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 C11orf65Q8NCR3 313 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 OR1M1Q8NGA1 313 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 TSPEARQ8WU66 669 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 ISOC1Q96CN7 298 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 PALMDQ9NP74 551 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 HHLA2Q9UM44 414 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 TMEM5Q9Y2B1 443 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 CCRL2O00421 344 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 ITM2AO43736 263 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 CD14P08571 375 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 AMY2BP19961 511 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 TPTEP56180 551 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 HNRNPA0Q13151 305 aaKnown RBP3.65□□□□□ -1.83
SNCA-213ENST00000618500 KIR2DS1Q14954 304 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 RFX4Q33E94 735 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 RUNDC3AQ59EK9 446 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 MESTQ5EB52 335 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 PLBD1Q6P4A8 553 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 MRPL21Q7Z2W9 205 aaKnown RBP3.65□□□□□ -1.83
SNCA-213ENST00000618500 TSPYL5Q86VY4 417 aaPredicted RBP3.65□□□□□ -1.83
SNCA-213ENST00000618500 OR4D11Q8NGI4 311 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 OR4C15Q8NGM1 316 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 OR5M8Q8NGP6 311 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 OR13D1Q8NGV5 346 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 IFT81Q8WYA0 676 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 WFDC6Q9BQY6 131 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 SEMA6AQ9H2E6 1030 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 RGCCQ9H4X1 137 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 ZMAT4Q9H898 229 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 PCDHB16Q9NRJ7 776 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 HAO2Q9NYQ3 351 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 SLC25A10Q9UBX3 287 aaPredicted RBP3.65□□□□□ -1.83
SNCA-213ENST00000618500 ZNF391Q9UJN7 358 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 ZNF256Q9Y2P7 627 aaPredicted RBP3.65□□□□□ -1.83
SNCA-213ENST00000618500 MPC1Q9Y5U8 109 aa3.65□□□□□ -1.83
SNCA-213ENST00000618500 CSMD3Q7Z407 3707 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 CPSF4LA6NMK7 179 aaKnown RBP3.64□□□□□ -1.83
SNCA-213ENST00000618500 BLOC1S5-TXNDC5H3BN57 136 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 ARPC1BO15143 372 aaKnown RBP3.64□□□□□ -1.83
SNCA-213ENST00000618500 CST4P01036 141 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 SHBGP04278 402 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 UMPSP11172 480 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 GZMMP51124 257 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 SLC18A1P54219 525 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 RUNX1Q01196 453 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 GTDC1Q4AE62 458 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 PGAP1Q75T13 922 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 WDR86Q86TI4 376 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 RTN4RL2Q86UN3 420 aa3.64□□□□□ -1.83
SNCA-213ENST00000618500 OFCC1Q8IZS5 231 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms