RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 SPERTQ8NA61 448 aa20.94■□□□□ 0.94
PMS1-220ENST00000618056 PLPP7Q8NBV4 271 aa20.94■□□□□ 0.94
PMS1-220ENST00000618056 OR8B4Q96RC9 309 aa20.94■□□□□ 0.94
PMS1-220ENST00000618056 LPAR2Q9HBW0 351 aa20.94■□□□□ 0.94
PMS1-220ENST00000618056 ACOD1A6NK06 481 aa20.93■□□□□ 0.94
PMS1-220ENST00000618056 MDH2P40926 338 aaKnown RBP20.93■□□□□ 0.94
PMS1-220ENST00000618056 PMELP40967 661 aa20.93■□□□□ 0.94
PMS1-220ENST00000618056 CDC42P60953 191 aa20.93■□□□□ 0.94
PMS1-220ENST00000618056 OR8B8Q15620 311 aa20.93■□□□□ 0.94
PMS1-220ENST00000618056 C1orf87Q8N0U7 546 aa20.93■□□□□ 0.94
PMS1-220ENST00000618056 MUC20Q8N307 709 aaPredicted RBP20.93■□□□□ 0.94
PMS1-220ENST00000618056 KLHL36Q8N4N3 616 aa20.93■□□□□ 0.94
PMS1-220ENST00000618056 UBAP1Q9NZ09 502 aa20.93■□□□□ 0.94
PMS1-220ENST00000618056 WARS2Q9UGM6 360 aaKnown RBP20.93■□□□□ 0.94
PMS1-220ENST00000618056 COL6A5A8TX70 2615 aa20.93■□□□□ 0.94
PMS1-220ENST00000618056 IGHV3-64DA0A0J9YX35 117 aa20.92■□□□□ 0.94
PMS1-220ENST00000618056 ANKRD30BLA7E2S9 258 aa20.92■□□□□ 0.94
PMS1-220ENST00000618056 PRR32B1ATL7 298 aa20.92■□□□□ 0.94
PMS1-220ENST00000618056 E9PQ18 207 aa20.92■□□□□ 0.94
PMS1-220ENST00000618056 PHYHO14832 338 aa20.92■□□□□ 0.94
PMS1-220ENST00000618056 PLPP2O43688 288 aa20.92■□□□□ 0.94
PMS1-220ENST00000618056 GSK3AP49840 483 aa20.92■□□□□ 0.94
PMS1-220ENST00000618056 SLC35F2Q8IXU6 374 aa20.92■□□□□ 0.94
PMS1-220ENST00000618056 CBR4Q8N4T8 237 aa20.92■□□□□ 0.94
PMS1-220ENST00000618056 OR8B12Q8NGG6 310 aa20.92■□□□□ 0.94
PMS1-220ENST00000618056 HRASLS5Q96KN8 279 aa20.92■□□□□ 0.94
PMS1-220ENST00000618056 CLN6Q9NWW5 311 aa20.92■□□□□ 0.94
PMS1-220ENST00000618056 CYB5R3P00387 301 aaPredicted RBP20.91■□□□□ 0.94
PMS1-220ENST00000618056 IFNA2P01563 188 aa20.91■□□□□ 0.94
PMS1-220ENST00000618056 SRD5A1P18405 259 aa20.91■□□□□ 0.94
PMS1-220ENST00000618056 HTR1FP30939 366 aa20.91■□□□□ 0.94
PMS1-220ENST00000618056 MZT1Q08AG7 82 aa20.91■□□□□ 0.94
PMS1-220ENST00000618056 GFOD2Q3B7J2 385 aa20.91■□□□□ 0.94
PMS1-220ENST00000618056 IL17RELQ6ZVW7 336 aa20.91■□□□□ 0.94
PMS1-220ENST00000618056 PQLC1Q8N2U9 271 aa20.91■□□□□ 0.94
PMS1-220ENST00000618056 CSNK2A3Q8NEV1 391 aa20.91■□□□□ 0.94
PMS1-220ENST00000618056 TRUB1Q8WWH5 349 aaKnown RBP20.91■□□□□ 0.94
PMS1-220ENST00000618056 C9orf16Q9BUW7 83 aa20.91■□□□□ 0.94
PMS1-220ENST00000618056 PATZ1Q9HBE1 687 aaKnown RBP20.91■□□□□ 0.94
PMS1-220ENST00000618056 FAM206AQ9NX38 181 aa20.91■□□□□ 0.94
PMS1-220ENST00000618056 PCDHB10Q9UN67 800 aa20.91■□□□□ 0.94
PMS1-220ENST00000618056 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.9■□□□□ 0.94
PMS1-220ENST00000618056 KIAA1324LA8MWY0 1029 aaPredicted RBP20.9■□□□□ 0.94
PMS1-220ENST00000618056 CXCR4P61073 352 aa20.9■□□□□ 0.94
PMS1-220ENST00000618056 POU4F2Q12837 409 aa20.9■□□□□ 0.94
PMS1-220ENST00000618056 TMED1Q13445 227 aa20.9■□□□□ 0.94
PMS1-220ENST00000618056 MPPED2Q15777 294 aa20.9■□□□□ 0.94
PMS1-220ENST00000618056 PRAMEF6Q5VXH4 476 aa20.9■□□□□ 0.94
PMS1-220ENST00000618056 ZNF322Q6U7Q0 402 aaPredicted RBP20.9■□□□□ 0.94
PMS1-220ENST00000618056 OR11L1Q8NGX0 322 aa20.9■□□□□ 0.94
PMS1-220ENST00000618056 ITFG2Q969R8 447 aa20.9■□□□□ 0.94
PMS1-220ENST00000618056 G6PC2Q9NQR9 355 aa20.9■□□□□ 0.94
PMS1-220ENST00000618056 A0A0U1RQV5 110 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 TMEM269A0A1B0GVZ9 245 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 F5H0A9 414 aaPredicted RBP20.89■□□□□ 0.94
PMS1-220ENST00000618056 PSMD9O00233 223 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 CPT2P23786 658 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 RIDAP52758 137 aaKnown RBP20.89■□□□□ 0.94
PMS1-220ENST00000618056 FTMTQ8N4E7 242 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 RFLNBQ8N5W9 214 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 OR51G2Q8NGK0 314 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 FAM81AQ8TBF8 368 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 NRG4Q8WWG1 115 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 DVL3Q92997 716 aaPredicted RBP20.89■□□□□ 0.94
PMS1-220ENST00000618056 RFKQ969G6 155 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 EME1Q96AY2 570 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 FN3KRPQ9HA64 309 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 TMEM165Q9HC07 324 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 UFSP2Q9NUQ7 469 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 C14orf119Q9NWQ9 140 aa20.89■□□□□ 0.94
PMS1-220ENST00000618056 FBN1P35555 2871 aaKnown RBP20.89■□□□□ 0.94
PMS1-220ENST00000618056 FAM20BO75063 409 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 IRF2P14316 349 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 THBS2P35442 1172 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 EGR3Q06889 387 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 ZNF829Q3KNS6 432 aaPredicted RBP20.88■□□□□ 0.93
PMS1-220ENST00000618056 LYZL4Q96KX0 146 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 VCX3BQ9H321 246 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 IMPAD1Q9NX62 359 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 IKZF2Q9UKS7 526 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 PPIAL4EA0A075B759 164 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 ZNF670-ZNF695F2Z2N8 137 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 PPIAL4DF5H284 164 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 PPIAL4FP0DN26 164 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 ACKR3P25106 362 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 SLC25A30Q5SVS4 291 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 OR8S1Q8NH09 359 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 TTTY10Q9BZA0 68 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 POLR3KQ9Y2Y1 108 aaPredicted RBP20.88■□□□□ 0.93
PMS1-220ENST00000618056 RHBDD3Q9Y3P4 386 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 PPIAL4AQ9Y536 164 aa20.88■□□□□ 0.93
PMS1-220ENST00000618056 PPIAL4CA0A0B4J2A2 164 aa20.87■□□□□ 0.93
PMS1-220ENST00000618056 CEACAM18A8MTB9 384 aa20.87■□□□□ 0.93
PMS1-220ENST00000618056 FOXH1O75593 365 aa20.87■□□□□ 0.93
PMS1-220ENST00000618056 PNPP00491 289 aa20.87■□□□□ 0.93
PMS1-220ENST00000618056 GATA3P23771 443 aa20.87■□□□□ 0.93
PMS1-220ENST00000618056 ZIK1Q3SY52 487 aaPredicted RBP20.87■□□□□ 0.93
PMS1-220ENST00000618056 ZNF404Q494X3 552 aa20.87■□□□□ 0.93
PMS1-220ENST00000618056 KRT74Q7RTS7 529 aa20.87■□□□□ 0.93
PMS1-220ENST00000618056 PBOV1Q9GZY1 135 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms