RNA–Protein interactions for RNA: ENST00000617470.4

SDHA-220, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 5 BASIC

Gene SDHA, Length 1,952 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-220ENST00000617470 PITPNAQ00169 270 aa17.84■□□□□ 0.45
SDHA-220ENST00000617470 C2orf76Q3KRA6 126 aa17.84■□□□□ 0.45
SDHA-220ENST00000617470 GLT8D1Q68CQ7 371 aa17.84■□□□□ 0.45
SDHA-220ENST00000617470 TFAP2EQ6VUC0 442 aa17.84■□□□□ 0.45
SDHA-220ENST00000617470 ZNF813Q6ZN06 617 aa17.84■□□□□ 0.45
SDHA-220ENST00000617470 ABHD12BQ7Z5M8 362 aaPredicted RBP17.84■□□□□ 0.45
SDHA-220ENST00000617470 GLCCI1Q86VQ1 547 aa17.84■□□□□ 0.45
SDHA-220ENST00000617470 SLC22A24Q8N4F4 322 aa17.84■□□□□ 0.45
SDHA-220ENST00000617470 FGFBP3Q8TAT2 258 aa17.84■□□□□ 0.45
SDHA-220ENST00000617470 FAM3DQ96BQ1 224 aa17.84■□□□□ 0.45
SDHA-220ENST00000617470 ZC3HAV1LQ96H79 300 aaKnown RBP17.84■□□□□ 0.45
SDHA-220ENST00000617470 LYZL4Q96KX0 146 aa17.84■□□□□ 0.45
SDHA-220ENST00000617470 PLSCR4Q9NRQ2 329 aa17.84■□□□□ 0.45
SDHA-220ENST00000617470 RBFOX1Q9NWB1 397 aaKnown RBP17.84■□□□□ 0.45
SDHA-220ENST00000617470 PLEK2Q9NYT0 353 aa17.84■□□□□ 0.45
SDHA-220ENST00000617470 ERRFI1Q9UJM3 462 aaPredicted RBP17.84■□□□□ 0.45
SDHA-220ENST00000617470 F5H5K5 113 aa17.83■□□□□ 0.44
SDHA-220ENST00000617470 BOLA2-SMG1P6H3BVE0 249 aa17.83■□□□□ 0.44
SDHA-220ENST00000617470 HNRNPCP07910 306 aaKnown RBP eCLIP17.83■□□□□ 0.44
SDHA-220ENST00000617470 PATE4P0C8F1 98 aa17.83■□□□□ 0.44
SDHA-220ENST00000617470 CRYGSP22914 178 aa17.83■□□□□ 0.44
SDHA-220ENST00000617470 CDK2P24941 298 aa17.83■□□□□ 0.44
SDHA-220ENST00000617470 FAPQ12884 760 aa17.83■□□□□ 0.44
SDHA-220ENST00000617470 CARTPTQ16568 116 aa17.83■□□□□ 0.44
SDHA-220ENST00000617470 RNASE12Q5GAN4 147 aaKnown RBP17.83■□□□□ 0.44
SDHA-220ENST00000617470 GLYATL3Q5SZD4 288 aa17.83■□□□□ 0.44
SDHA-220ENST00000617470 ZNF57Q68EA5 555 aaPredicted RBP17.83■□□□□ 0.44
SDHA-220ENST00000617470 MTFR2Q6P444 385 aa17.83■□□□□ 0.44
SDHA-220ENST00000617470 LIX1LQ8IVB5 337 aa17.83■□□□□ 0.44
SDHA-220ENST00000617470 ZNF610Q8N9Z0 462 aa17.83■□□□□ 0.44
SDHA-220ENST00000617470 S100A16Q96FQ6 103 aaKnown RBP17.83■□□□□ 0.44
SDHA-220ENST00000617470 SLC17A5Q9NRA2 495 aa17.83■□□□□ 0.44
SDHA-220ENST00000617470 INTS1Q8N201 2190 aaKnown RBP17.83■□□□□ 0.44
SDHA-220ENST00000617470 MEGF11A6BM72 1044 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 OR6C65A6NJZ3 312 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 SYNGR3O43761 229 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 IL18BPO95998 194 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 SRP9P49458 86 aaKnown RBP17.82■□□□□ 0.44
SDHA-220ENST00000617470 C9orf135Q5VTT2 229 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 SMIM4Q8WVI0 70 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 GCDHQ92947 438 aaPredicted RBP17.82■□□□□ 0.44
SDHA-220ENST00000617470 LINC00470Q9BZP3 86 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 AUNIPQ9H7T9 357 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 CGAP01215 116 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 GPR176Q14439 515 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 C1orf100Q5SVJ3 147 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 FBXW9Q5XUX1 488 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 SKA3Q8IX90 412 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 DUSP18Q8NEJ0 188 aa17.82■□□□□ 0.44
SDHA-220ENST00000617470 LOC100289279A0A1B0GTE1 492 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 TMEM272A0A1B0GTI8 110 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 ZNF587BE7ETH6 402 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 SGCEO43556 437 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 ZNF32P17041 273 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 HTR2CP28335 458 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 CHRNB4P30926 498 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 GNALP38405 381 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 INPP1P49441 399 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 RAB35Q15286 201 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 ZNF774Q6NX45 483 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 OR1M1Q8NGA1 313 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 OR6M1Q8NGM8 313 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 OR14K1Q8NGZ2 314 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 PGAM5Q96HS1 289 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 FAM71F1Q96KD3 344 aaPredicted RBP17.81■□□□□ 0.44
SDHA-220ENST00000617470 PIGMQ9H3S5 423 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 FREM1Q5H8C1 2179 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 PCNX1Q96RV3 2341 aa17.81■□□□□ 0.44
SDHA-220ENST00000617470 M0R135 149 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 PTHLHP12272 177 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 BDKRB2P30411 391 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 BTCP35070 178 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 MNDAP41218 407 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 HGFACQ04756 655 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 KRTAP27-1Q3LI81 207 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 HACD4Q5VWC8 232 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 MZT2BQ6NZ67 158 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 ANKRD16Q6P6B7 361 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 NKAIN3Q8N8D7 197 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 OR52N4Q8NGI2 321 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 OR4D6Q8NGJ1 314 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 ZNF799Q96GE5 643 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 RABL2AQ9UBK7 228 aaPredicted RBP17.8■□□□□ 0.44
SDHA-220ENST00000617470 RABL2BQ9UNT1 228 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 RTTNQ86VV8 2226 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 OR6C6A6NF89 314 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 LDLRAD4O15165 306 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 ZG16O60844 167 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 CTAG2O75638 210 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 FOXG1P55316 489 aaPredicted RBP17.8■□□□□ 0.44
SDHA-220ENST00000617470 PSG4Q00888 419 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 GFOD2Q3B7J2 385 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 TMEM69Q5SWH9 247 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 DOK3Q7L591 496 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 RNF144BQ7Z419 303 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 COMMD2Q86X83 199 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 JAGN1Q8N5M9 183 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 RELL2Q8NC24 303 aaPredicted RBP17.8■□□□□ 0.44
SDHA-220ENST00000617470 OR13C9Q8NGT0 318 aa17.8■□□□□ 0.44
SDHA-220ENST00000617470 AKR7LQ8NHP1 331 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms