RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 RAB40AQ8WXH6 277 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 FGGYQ96C11 551 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 CMBLQ96DG6 245 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 C14orf79Q96F83 325 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 TXNIPQ9H3M7 391 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 MEX3AA1L020 520 aaKnown RBP12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 OR4C45A6NMZ5 311 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 MS4A18H0YCH9 400 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 POU3F4P49335 361 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 RAB5BP61020 215 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 MS4A18Q3C1V0 323 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 ZNF468Q5VIY5 522 aaPredicted RBP12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 ABHD17BQ5VST6 288 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 STEAP1BQ6NZ63 245 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 H1FNTQ75WM6 255 aaPredicted RBP12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 CDC20BQ86Y33 519 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 ACBD4Q8NC06 268 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 NUBPLQ8TB37 319 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 ASH2LQ9UBL3 628 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 TMEM131Q92545 1883 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 OTOGLQ3ZCN5 2332 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 H7C417 338 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 HLA-AP01891 365 aaKnown RBP12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 VAMP1P23763 118 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 AGTR1P30556 359 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 SLC17A1Q14916 467 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 C9orf152Q5JTZ5 239 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 INO80EQ8NBZ0 244 aaPredicted RBP12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 DEFB124Q8NES8 71 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 GHRLQ9UBU3 117 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 MTFP1Q9UDX5 166 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 TINAGQ9UJW2 476 aa12.86□□□□□ -0.35
SHROOM1-208ENST00000617339 LY6G6EA0A0G2JKS1 128 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 SNAPINO95295 136 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 RAB3DO95716 219 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 ITGA5P08648 1049 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 PTAFRP25105 342 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 AVPR2P30518 371 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 SLC35D3Q5M8T2 416 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 ZNF704Q6ZNC4 412 aaPredicted RBP12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 MCEMP1Q8IX19 187 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 OR2AJ1Q8NGZ0 328 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 UCN2Q96RP3 112 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 FAM117AQ9C073 453 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 PLA2G3Q9NZ20 509 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 STEAP1Q9UHE8 339 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 U3KQA8 63 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 METTL21EPA6NDL7 271 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 RER1O15258 196 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 SULT1B1O43704 296 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 PATE4P0C8F1 98 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 CCL3P10147 92 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 PEA15Q15121 130 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 RABEPKQ7Z6M1 372 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 KCNRGQ8N5I3 272 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 PLPP5Q8NEB5 264 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 OR13C9Q8NGT0 318 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 ZFHX4Q86UP3 3567 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 DCHS1Q96JQ0 3298 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 C5orf51A6NDU8 294 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 FAM166BA8MTA8 275 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 NPIPA2E9PIF3 369 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 NPIPA3F8WFD2 350 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 TNFSF15O95150 251 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 LY86O95711 162 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 CSF1P09603 554 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 GDF1P27539 372 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 PRSS3P35030 304 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 MNDAP41218 407 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 CLDN17P56750 224 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 C11orf87Q6NUJ2 197 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 KCTD18Q6PI47 426 aaPredicted RBP12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 GALNT16Q8N428 558 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 SLC26A10Q8NG04 563 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 CLDN23Q96B33 292 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 SELENOIQ9C0D9 397 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 RAB33BQ9H082 229 aa12.85□□□□□ -0.35
SHROOM1-208ENST00000617339 SPAARA0A1B0GVQ0 90 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 C10orf142B7Z368 130 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 IFNA4P05014 189 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 CALCBP10092 127 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 HSD11B1P28845 292 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 RIPPLY1Q0D2K3 151 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 C2orf76Q3KRA6 126 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 MYO7BQ6PIF6 2116 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 OR1J4Q8NGS1 313 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 THOC3Q96J01 351 aaKnown RBP12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 DCBLD2Q96PD2 775 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 A0A1W2PPE3 182 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 SNAPC5O75971 98 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 CASRP41180 1078 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 FABP9Q0Z7S8 132 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 KRBOX4Q5JUW0 171 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 RNF144BQ7Z419 303 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 TMEM200AQ86VY9 491 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 ZNF227Q86WZ6 799 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 UEVLDQ8IX04 471 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 ARL11Q969Q4 196 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 DDIT4LQ96D03 193 aa12.84□□□□□ -0.35
SHROOM1-208ENST00000617339 ZC3H10Q96K80 434 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms