RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 IGKV3D-15A0A087WSY6 115 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 ZNF587BE7ETH6 402 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 GMDSO60547 372 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 RAB3AP20336 220 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 GIFP27352 417 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 DCTDP32321 178 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 TAS2R20P59543 309 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 HIST1H3AP68431 136 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 UBE2V2Q15819 145 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 IGFBP7Q16270 282 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 HIST2H3PS2Q5TEC6 136 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 FAM166AQ6J272 317 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 ZNF585AQ6P3V2 769 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 IGF2-ASQ6U949 168 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 HIST2H3AQ71DI3 136 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 P4HA3Q7Z4N8 544 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 OR14K1Q8NGZ2 314 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 OR8S1Q8NH09 359 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 SNIP1Q8TAD8 396 aaKnown RBP6.79□□□□□ -1.32
NEK3-207ENST00000617054 DVL3Q92997 716 aaPredicted RBP6.79□□□□□ -1.32
NEK3-207ENST00000617054 ZFAND3Q9H8U3 227 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 NKIRAS2Q9NYR9 191 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 ZGRF1Q86YA3 2104 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 ARHGAP21Q5T5U3 1957 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 ICE1Q9Y2F5 2266 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 LOC100509620A0A075B734 347 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 TRAV17A0A0B4J275 112 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 PROB1E7EW31 1015 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 ACTL6AO96019 429 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 BTCP35070 178 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 ZNF93P35789 620 aaPredicted RBP6.79□□□□□ -1.32
NEK3-207ENST00000617054 MMP15P51511 669 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 FOXF2Q12947 444 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 RIN1Q13671 783 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 IGFL2Q6UWQ7 119 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 OR5AS1Q8N127 324 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 RPRMLQ8N4K4 120 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 PAQR4Q8N4S7 273 aaPredicted RBP6.79□□□□□ -1.32
NEK3-207ENST00000617054 MINDY2Q8NBR6 621 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 TMEM104Q8NE00 496 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 ITPKCQ96DU7 683 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 GPER1Q99527 375 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 NICN1Q9BSH3 213 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 TMEM138Q9NPI0 162 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 SLC17A5Q9NRA2 495 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 TBCCD1Q9NVR7 557 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 RBFOX1Q9NWB1 397 aaKnown RBP6.79□□□□□ -1.32
NEK3-207ENST00000617054 TIMM10BQ9Y5J6 103 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 LOC100289279A0A1B0GTE1 492 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 C5orf49A4QMS7 147 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 LYZL6O75951 148 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 CST2P09228 141 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 MMP7P09237 267 aaPredicted RBP6.79□□□□□ -1.32
NEK3-207ENST00000617054 CRYGSP22914 178 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 AGTR1P30556 359 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 ZNF92Q03936 586 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 TNK1Q13470 666 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 HLXQ14774 488 aaPredicted RBP6.79□□□□□ -1.32
NEK3-207ENST00000617054 AWAT2Q6E213 333 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 PLET1Q6UQ28 207 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 ZNF101Q8IZC7 436 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 ZADH2Q8N4Q0 377 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 OR4D10Q8NGI6 311 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 SETD6Q8TBK2 473 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 EXTL1Q92935 676 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 SPTSSAQ969W0 71 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 REEP6Q96HR9 211 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 BCO1Q9HAY6 547 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 GPR173Q9NS66 373 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 MCUBQ9NWR8 336 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 PARPBPQ9NWS1 579 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 EMC3Q9P0I2 261 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 FLVCR2Q9UPI3 526 aa6.79□□□□□ -1.32
NEK3-207ENST00000617054 WIPF3A6NGB9 483 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 NGFP01138 241 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 FAM157BP0CG42 384 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 PF4V1P10720 104 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 HOXB1P14653 301 aaPredicted RBP6.78□□□□□ -1.32
NEK3-207ENST00000617054 OTX1P32242 354 aaPredicted RBP6.78□□□□□ -1.32
NEK3-207ENST00000617054 RAB1AP62820 205 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 UNC119Q13432 240 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 PLEKHN1Q494U1 663 aaPredicted RBP6.78□□□□□ -1.32
NEK3-207ENST00000617054 RIPPLY2Q5TAB7 128 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 RHOUQ7L0Q8 258 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 BEST4Q8NFU0 473 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 PHF21AQ96BD5 680 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 ABHD17AQ96GS6 310 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 ZNF629Q9UEG4 869 aaPredicted RBP6.78□□□□□ -1.32
NEK3-207ENST00000617054 POLR3KQ9Y2Y1 108 aaPredicted RBP6.78□□□□□ -1.32
NEK3-207ENST00000617054 RHBDD3Q9Y3P4 386 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 CACNG2Q9Y698 323 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 PIEZO1Q92508 2521 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 CIB4A0PJX0 185 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 GGT3PA6NGU5 568 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 SULT1B1O43704 296 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 RAD51DO75771 328 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 FARS2O95363 451 aaKnown RBP6.78□□□□□ -1.32
NEK3-207ENST00000617054 IL18BPO95998 194 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 VSIG8P0DPA2 414 aa6.78□□□□□ -1.32
NEK3-207ENST00000617054 CPN1P15169 458 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms